TreeBASE Tree Tr1694

Resource Type: 
Analysis
Name: 
TreeBASE Tree Tr1694
Phylogenetic tree: 
TreeBASE Tree Tr1694
Description: 

TreeBASE Tree Tr1694 from study S1105. Fig. 1. Strict consensus of 20,000 minimal length 881-step trees derived from equally-weighted maximum parsimony analysis of aligned ITS-1 and ITS-2 sequences from 150 terminals (159 accessions) of Apiaceae subfamily Apioideae. Consistency indices = 0.4654 and 0.3762, with and without uninformative characters, respectively; retention index = 0.6405.

Publication: 
Sun F, Downie S, Hartman R. An ITS-based phylogenetic analysis of the perennial, endemic Apiaceae subfamily Apioideae of western North America. Systematic botany. 2004; 29(2):419-431.
Program, Pipeline, Workflow or Method Name: 
CLUSTAL X + PAUP*
Program Version: 
n/a + 4.0
Date Performed: 
Thursday, January 1, 2004 - 00:00
Data Source: 
Source Name
: TreeBASE Tr1694
Stock: 
NameUniquenameStock Type
S1105_Aethusa_cynapium
S1105_U30582+U30583
accession
S1105_Aletes_acaulis
S1105_AF358461+AF358528
accession
S1105_Aletes_anisatus
S1105_AF358462+AF358529
accession
S1105_Aletes_calcicola
S1105_AY146818+AY146884
accession
S1105_Aletes_filifolius
S1105_AY146819+AY146885
accession
S1105_Aletes_humilis
S1105_U78401+U78461
accession
S1105_Aletes_macdoug_brevi_2acc
S1105_A_m_brevi_2acc
accession
S1105_Aletes_macdoug_brevi_3acc
S1105_A_m_brevi_3acc
accession
S1105_Aletes_macdoug_macdoug
S1105_AY146824+AY146890
accession
S1105_Aletes_sessiliflorus
S1105_AF358464+AF358531
accession
Project: 
NameDescription
TreeBASE Study S1105
TreeBASE Study S1105. An ITS-Based Phylogenetic Analysis of the Perennial, Endemic Apiaceae Subfamily Apioideae of Western North America. This TreeBASE study contains one tree. The publication contains three trees.