The complete chloroplast genome and phylogenetic analysis of Cuminum cyminum

Resource Type: 
Publication
Publication Type: 
Journal Article
Title: 
The complete chloroplast genome and phylogenetic analysis of Cuminum cyminum
Authors: 
Zhou Jing, Liu Zhenwen
Series Name: 
Mitochondrial DNA. Part B, Resources
Volume: 
5
Issue: 
1
Page Numbers: 
1079-1080
Publication Year: 
2020
Publication Date: 
2020 Jan 2
DOI: 
10.1080/23802359.2020.1722037
Citation: 
Zhou Jing, Liu Zhenwen. The complete chloroplast genome and phylogenetic analysis of Cuminum cyminum. Mitochondrial DNA. Part B, Resources. 2020 Jan 2 2020; 5(1):1079-1080.
Abstract: 
Cuminum cyminum (Apiaceae) is an economically important plant, whose fruits are usually used as flavoring, and also have pharmacological activities such as antioxidant, antibacterial, hypolipidemic, and so on. In this study, we assembled and annotated complete chloroplast (cp) genome sequence of C. cyminum. The results showed that the complete cp genome of C. cyminum was 157,839 bp in length, consisting of a large single-copy (LSC) region of 83,927bp, a small single-copy (SSC) region of 17,598bp, and two inverted repeat regions (IRa and IRb) of 28,157bp. In total, 131 genes were annotated, comprising of 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis indicated that C. cyminum belongs to the tribe Scandiceae, and showed close relationship with Daucus carota.
Publisher: 
Taylor & Francis