Resource Type:
Germplasm Accession
Accession:
PI 279764
Cross Reference:
| GRIN Accession |  |
|---|
Organism:
Name:
Daucus capillifolius Libya
Identifier:
PI 279764
Alias:
18
Description:
Synonyms:18; DONATED 03/20/1962 Idaho, United States by USDA Branch Experiment Station. COLLECTED PRE 03/20/1962 Libya by
Geographic Location:
| Latitude | Uncertainty (±) | Longitude | Uncertainty (±) | Altitude (m) | Uncertainty (±) | Description |
|---|---|---|---|---|---|---|
| unavailable | unavailable | unavailable | Libya: Sandy soil, Gebel, near Jefren, Tripoli. |
Biomaterial:
| Name | Description |
|---|---|
Publication:
- Spooner DM, Ruess H, Iorizzo M, Senalik D, Simon P. Entire plastid phylogeny of the carrot genus (Daucus, Apiaceae): Concordance with nuclear data and mitochondrial and nuclear DNA insertions to the plastid.. American journal of botany. 2017 Feb; 104(2):296-312.
- Spooner D, Rojas P, Bonierbale M, Mueller LA, Srivastav M, Senalik D, Simon P. Molecular phylogeny of Daucus (Apiaceae). Systematic botany. 2013; 38(3):850-857.
- Arbizu C, Ruess H, Senalik D, Simon PW, Spooner DM. Phylogenomics of the carrot genus (Daucus, Apiaceae).. American journal of botany. 2014 Oct; 101(10):1666-85.
- Arbizu C, Reitsma KR, Simon PW, Spooner DM. Morphometrics of Daucus (Apiaceae): a counterpart to a phylogenomic study.. American journal of botany. 2014 Nov; 101(11):2005-16.
- Arbizu CI, Ellison SL, Senalik D, Simon PW, Spooner DM. Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae).. BMC evolutionary biology. 2016 Oct 28; 16(1):234.
Relationship:
| Relationships |
|---|
| The sample, PI_279764_03ncai01_SD:DAUCUS.AMES.OBS.2010, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI_279764_03ncai01_SD:DAUCUS.AMES.OBS.2013, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI_279764_84ncai01_SD:NC7.100SEEDWGT.TRANSFER.FROM.NC7IV.TABLE, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI_279764_88ncab02_SD:NC7.100SEEDWGT.TRANSFER.FROM.NC7IV.TABLE, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI_279764_90ncai01_SD:NC7.100SEEDWGT.TRANSFER.FROM.NC7IV.TABLE, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI_279764_03ncai01_SD:NC7.100SEEDWGT.TRANSFER.FROM.NC7IV.TABLE, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI_279764_88ncab01_SD:NC7.100SEEDWGT.TRANSFER.FROM.NC7IV.TABLE, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI 279764_10.21273/HORTSCI13333-18, is sample of accession, Daucus capillifolius Libya. |
| The sample, PI 279764_10.21273/HORTSCI14144-19, is sample of accession, Daucus capillifolius Libya. |
Project:
| Name | Description |
|---|---|
TreeBASE study 13876: Molecular phylogeny of Daucus (Apiaceae). There is one tree from this study available in CarrotOmics. Tree Tr60728 corresponds to figure 1 in the publication, however, branch lengths and parsimony bootstrap values were not included in the TreeBASE submission. The tree in figure 2 from the publication was not submitted to TreeBASE and therefore is not present in CarrotOmics. | |
TreeBASE study 15477: A phylogenomic study of Daucus. There are six analyses from this study providing six trees available in CarrotOmics. None of these trees is present in the referenced publication. None of the trees in the referenced publication are in TreeBASE. Note that publication title is different than the TreeBASE study title. | |
TreeBASE Study S19872. This study contains 25 trees. One tree (Tr98472) corresponds to figure 2 in the reference publication, the remaining trees are supplementary information. | |
The objectives of this study were to evaluate the response of diverse carrot germplasm to salinity stress, identify salt-tolerant carrot germplasm that may be used by breeders, and define appropriate screening criteria for assessing salt tolerance in germinating carrot seed. | |
The objectives of this study were to evaluate the response of diverse carrot germplasm to heat stress, identify heat-tolerant germplasm that may be used by plant breeders, and define the appropriate temperature for assessing heat tolerance in germinating carrot seed. |
Analysis:
| Name | Description |
|---|---|
TreeBASE Tree Tr60728 from study S13876: Molecular Phylogeny of Daucus. This tree corresponds to figure 1 in the publication, however, branch lengths and parsimony bootstrap values were not included in the TreeBASE submission. | |
TreeBASE Tree Tr71398 from study S15477. Original tree name "Tree1". This tree is not present in the publication | |
TreeBASE Tree Tr71399 from study S15477. Original tree name "Tree2". This tree is not present in the publication | |
TreeBASE Tree Tr71400 from study S15477. Original tree name "Tree3". This tree is not present in the publication | |
TreeBASE Tree Tr71401 from study S15477. Original tree name "Tree4". This tree is not present in the publication | |
TreeBASE Tree Tr71402 from study S15477. Original tree name "Tree5". This tree is not present in the publication | |
TreeBASE Tree Tr71403 from study S15477. Original tree name "Tree6". This tree is not present in the publication | |
TreeBASE Tree Tr98472 from study S19872. This tree corresponds to figure 2 in the referenced publication | |
TreeBASE Tree Tr98473 from study S19872. Original tree name "PAUP_2". This is a supplemental tree not present in the referenced publication. | |
TreeBASE Tree Tr98474 from study S19872. Original tree name "PAUP_3". This is a supplemental tree not present in the referenced publication. |
Feature:
| Name | Uniquename | Feature Type |
|---|---|---|
S13876_Daucus_capillifolius | S13876_Daucus_capillifolius | DNA |
S15477_Daucus_capillifolius_279764 | S15477_Daucus_capillifolius_279764 | DNA |
S19872_Daucus_carota_subsp._capillifolius_279764 | S19872_Daucus_carota_subsp._capillifolius_279764 | DNA |
Stock Center:
GRIN Accession
Data Year:
1962
Image File:
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