| GRIN Accession |  |
|---|
- Tun201
- PS 0809
Synonyms:PS 0809:Tun201; Flowers yellow.; COLLECTED 08/09/2009 Medenine, Tunisia by Spooner, D., USDA, ARS; Simon, P., USDA, ARS, Vegetable Crops Research Unit; Rouz, S., Tunisian National Gene Bank (BNG); Bouzbida, B., Institut des Regiones Arides. DONATED 10/20/2009 Wisconsin, United States by Simon, P., USDA, ARS, Vegetable Crops Research Unit
| Latitude | Uncertainty (±) | Longitude | Uncertainty (±) | Altitude (m) | Uncertainty (±) | Description |
|---|---|---|---|---|---|---|
| 33.87 | 10.841111 | 9 | Tunisia: Djerba Island, Boumellel, 2 km north of Houmt Souk. |
- Martínez-Flores et al. Extended studies of interspecific relationships in Daucus (Apiaceae) using DNA sequences from ten nuclear orthologues. Botanical Journal of the Linnean Society. 2019. 191(2):164-87
- Arbizu CI, Simon PW, Martínez-Flores F, Ruess H, Crespo MB, Spooner DM. Integrated Molecular and Morphological Studies of the Daucus guttatus Complex (Apiaceae). Systematic botany. 2016; 41(2):479-492.
- Arbizu C, Ruess H, Senalik D, Simon PW, Spooner DM. Phylogenomics of the carrot genus (Daucus, Apiaceae).. American journal of botany. 2014 Oct; 101(10):1666-85.
- Arbizu C, Reitsma KR, Simon PW, Spooner DM. Morphometrics of Daucus (Apiaceae): a counterpart to a phylogenomic study.. American journal of botany. 2014 Nov; 101(11):2005-16.
- Arbizu CI, Ellison SL, Senalik D, Simon PW, Spooner DM. Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae).. BMC evolutionary biology. 2016 Oct 28; 16(1):234.
| Relationships |
|---|
| The sample, Ames_30198_09ncao01_SD:DAUCUS.AMES.OBS.2010, is sample of accession, Daucus capillifolius Tunisia. |
| The sample, Ames_30198_10ncai01_SD:DAUCUS.AMES.OBS.2013, is sample of accession, Daucus capillifolius Tunisia. |
| The sample, Ames 30198_10.21273/HORTSCI13333-18, is sample of accession, Daucus capillifolius Tunisia. |
| The sample, Ames 30198_10.21273/HORTSCI14144-19, is sample of accession, Daucus capillifolius Tunisia. |
| The sample, Ames 30198_10.21273/HORTSCI16806-22, is sample of accession, Daucus capillifolius Tunisia. |
| Name | Description |
|---|---|
TreeBASE study 15477: A phylogenomic study of Daucus. There are six analyses from this study providing six trees available in CarrotOmics. None of these trees is present in the referenced publication. None of the trees in the referenced publication are in TreeBASE. Note that publication title is different than the TreeBASE study title. | |
TreeBASE Study S17932. Integrated molecular and morphological studies of the Daucus guttatus complex. This study contains one tree, corresponding to figure 1 in the referenced publication "Maximum likelihood phylogenetic reconstruction of the Daucus guttatus complex including species that belong to Clades A and B using 10 nuclear orthologs.". Other trees in the publication (figures 2 and 3) were not submitted to TreeBASE and are not included in CarrotOmics. | |
TreeBASE Study S23618. Extended studies of interspecific relationships in Daucus (Apiaceae) using DNA sequences from ten nuclear orthologues. This study contains one tree. | |
Traits evaluated: ANTHER COLOR (ANTHERCOL); BRACT LENGTH (BRACTLEN); NUMBER OF BRACT POINTS (BRACTPNTS); BRACT WIDTH (BRACTWID); BRACT LOBE PAIRS (BRCTLOBPAR); FLOWER RAY NUMBER (FLWRAYNUM); FOLIAGE COLOR (FOLIAGECOL); INVOLUCRAL BRACT POSITION (INVOLBRACT); LEAF PUBESCENCE (LEAFPUBE); LEAF TYPE (LEAFTYPE); MATURE LEAF LENGTH (MATLEAFLEN); MATURE LEAF WIDTH (MATLEAFWID); MATURE PETIOLE LENGTH (MATPETLENG); MATURE PETIOLE THICKNESS (MATPETTHK); PIGMENTED CENTRAL UMBEL COLOR (PCUCOLOR); PIGMENTED CENTRAL UMBEL (PCUPRESENT); PEDUNCLE PUBESCENCE (PEDUNCPUB); PETAL COLOR (PETALCOLOR); PETIOLE HAIRINESS (PETIOLHAIR); PETIOLE SHAPE (PETIOLSHP); PETAL LENGTH CENTRAL (PETLENCEN); PETAL LENGTH PERIPHERAL (PETLENPER); PLANT HEIGHT (PLANTHEIGH); PRIMARY UMBEL FLOWER HEIGHT (PRIMFLWHT); PRIMARY UMBEL DIAMETER (PRIMUMDIAM); SECONDARY UMBEL DIAMETER (SECUMBDIAM); SEED LENGTH (SEEDLENGTH); SEED WIDTH (SEEDWIDTH); SPINE CURVATURE (SPINECURV); HAIRS AT BASE OF PRIMARY SPINE (SPINEHAIRS); SPINE CONFLUENCY (SPNCONFLU); LENGTH OF SECONDARY RIB SPINES (SPNSECLENG); NO. OF SPINES ON SECONDARY RIB (SPNSECRBNO); BARBS AT TIPS OF SPINES (SPNTIPBARB); STAMEN LENGTH (STAMENLENG); STEM DIAMETER (STEMDIAM); STIPULE WIDTH (STIPULWIDT); STYLE LENGTH (STYLELENGH); STYLOPODIUM LENGTH (STYLPODLEN); STYLOPODIUM WIDTH (STYLPODWID); UMBEL SHAPE - FULL BLOOM (UMBELSHPFB); UMBEL SHAPE - MATURE SEED (UMBELSHPMT) Evaluation location: Iowa, United States. Method: Daucus descriptor data recorded from observation planting Field N-10 at the NCRPIS farm (42 degrees 0 minutes N latitude 93 degrees 30 minutes W longitude). | |
The objectives of this study were to evaluate the response of diverse carrot germplasm to salinity stress, identify salt-tolerant carrot germplasm that may be used by breeders, and define appropriate screening criteria for assessing salt tolerance in germinating carrot seed. | |
The objectives of this study were to evaluate the response of diverse carrot germplasm to heat stress, identify heat-tolerant germplasm that may be used by plant breeders, and define the appropriate temperature for assessing heat tolerance in germinating carrot seed. | |
This study was designed to define the appropriate osmotic potential for evaluating drought tolerance in carrot, to evaluate the response of diverse carrot germplasm to drought stress during seed germination to identify drought tolerant accessions that may be used by plant breeders, and to evaluate the relation between amylase activity and germination rate of drought tolerant and sensitive accessions. | |
Traits evaluated: ANTHER COLOR (ANTHERCOL); BRACT LENGTH (BRACTLEN); NUMBER OF BRACT POINTS (BRACTPNTS); BRACT WIDTH (BRACTWID); BRACT LOBE PAIRS (BRCTLOBPAR); FLOWER RAY NUMBER (FLWRAYNUM); FOLIAGE COLOR (FOLIAGECOL); INVOLUCRAL BRACT POSITION (INVOLBRACT); LEAF PUBESCENCE (LEAFPUBE); LEAF TYPE (LEAFTYPE); MATURE LEAF LENGTH (MATLEAFLEN); MATURE LEAF WIDTH (MATLEAFWID); MATURE PETIOLE LENGTH (MATPETLENG); MATURE PETIOLE THICKNESS (MATPETTHK); PIGMENTED CENTRAL UMBEL COLOR (PCUCOLOR); PIGMENTED CENTRAL UMBEL (PCUPRESENT); PEDUNCLE PUBESCENCE (PEDUNCPUB); PETAL COLOR (PETALCOLOR); PETIOLE HAIRINESS (PETIOLHAIR); PETIOLE SHAPE (PETIOLSHP); PETAL LENGTH CENTRAL (PETLENCEN); PETAL LENGTH PERIPHERAL (PETLENPER); PLANT HEIGHT (PLANTHEIGH); PRIMARY UMBEL FLOWER HEIGHT (PRIMFLWHT); PRIMARY UMBEL DIAMETER (PRIMUMDIAM); SECONDARY UMBEL DIAMETER (SECUMBDIAM); SEED LENGTH (SEEDLENGTH); SEED WIDTH (SEEDWIDTH); SPINE CURVATURE (SPINECURV); HAIRS AT BASE OF PRIMARY SPINE (SPINEHAIRS); WIDTH SEC RIB SPINE CONFLUENCE (SPNCNFLWDT); SPINE CONFLUENCY (SPNCONFLU); LENGTH OF SECONDARY RIB SPINES (SPNSECLENG); NO. OF SPINES ON SECONDARY RIB (SPNSECRBNO); BARBS AT TIPS OF SPINES (SPNTIPBARB); STAMEN LENGTH (STAMENLENG); STEM DIAMETER (STEMDIAM); STIPULE WIDTH (STIPULWIDT); UMBEL SHAPE - FULL BLOOM (UMBELSHPFB); UMBEL SHAPE - MATURE SEED (UMBELSHPMT) Evaluation location: Iowa, United States. Method: Daucus descriptor data recorded from observation planting Field W-1 at the NCRPIS farm (42 degrees 3 minutes N latitude 93 degrees 30 minutes W longitude). |
| Name | Description |
|---|---|
TreeBASE Tree Tr115096 from study S23618. This tree corresponds to figure 1 in the referenced publication. Strict consensus maximum parsimony tree of 48 trees (tree length 8341) constructed with ten nuclear orthologous gene sequences of allele set B, without Daucus montanus, but with this species drawn in manually based on individual allele results supporting it as an allopolyploid species between D. pusillus and D. glochidiatus. Original tree name "MajRule" | |
TreeBASE Tree Tr71398 from study S15477. Original tree name "Tree1". This tree is not present in the publication | |
TreeBASE Tree Tr71399 from study S15477. Original tree name "Tree2". This tree is not present in the publication | |
TreeBASE Tree Tr71400 from study S15477. Original tree name "Tree3". This tree is not present in the publication | |
TreeBASE Tree Tr71401 from study S15477. Original tree name "Tree4". This tree is not present in the publication | |
TreeBASE Tree Tr71402 from study S15477. Original tree name "Tree5". This tree is not present in the publication | |
TreeBASE Tree Tr71403 from study S15477. Original tree name "Tree6". This tree is not present in the publication | |
TreeBASE Tree Tr89356 from study S17932. This tree corresponds to figure 1 in the referenced publication "Maximum likelihood phylogenetic reconstruction of the daucus guttatus complex including species that belong to clades a and b using 10 nuclear orthologs. |
| Name | Uniquename | Feature Type |
|---|---|---|
S15477_Daucus_capillifolius_A30198 | S15477_Daucus_capillifolius_A30198 | DNA |
S17932_Daucus_carota_subsp._capillifolius_30198 | S17932_Daucus_carota_subsp._capillifolius_30198 | DNA |
S23618_Daucus_carota_subsp._capillifolius_30198 | S23618_Daucus_carota_subsp._capillifolius_30198 | DNA |
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