Daucus syrticus Tunisia

Resource Type: 
Germplasm Accession
Accession: 
Ames 29108
Cross Reference: 
GRIN AccessionLoading content
Organism: 
Name: 
Daucus syrticus Tunisia
Identifier: 
Ames 29108
Alias: 
  • PS 0507
  • 16
Description: 

Synonyms:16:PS 0507; COLLECTED 05/2007 Tunisia by Simon, P., USDA, ARS, Vegetable Crops Research Unit. DONATED 07/27/2007 Wisconsin, United States by Simon, P., USDA, ARS, Vegetable Crops Research Unit

Geographic Location: 
LatitudeUncertainty (±)LongitudeUncertainty (±)Altitude (m)Uncertainty (±)Description
33.31666610.382778unavailableTunisia
Biomaterial: 
NameDescription
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Publication: 
  1. Spooner DM, Ruess H, Iorizzo M, Senalik D, Simon P. Entire plastid phylogeny of the carrot genus (Daucus, Apiaceae): Concordance with nuclear data and mitochondrial and nuclear DNA insertions to the plastid.. American journal of botany. 2017 Feb; 104(2):296-312.
  2. Arbizu C, Ruess H, Senalik D, Simon PW, Spooner DM. Phylogenomics of the carrot genus (Daucus, Apiaceae).. American journal of botany. 2014 Oct; 101(10):1666-85.
  3. Arbizu C, Reitsma KR, Simon PW, Spooner DM. Morphometrics of Daucus (Apiaceae): a counterpart to a phylogenomic study.. American journal of botany. 2014 Nov; 101(11):2005-16.
  4. Arbizu CI, Ellison SL, Senalik D, Simon PW, Spooner DM. Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae).. BMC evolutionary biology. 2016 Oct 28; 16(1):234.
Relationship: 
There are 4 relationships.
Relationships
The sample, Ames 29108.ALB.2014.1, is sample of accession, Daucus syrticus Tunisia.
The sample, Ames 29108.ALB.2014.2, is sample of accession, Daucus syrticus Tunisia.
The sample, Ames_29108_08ncai01_SD:DAUCUS.AMES.OBS.2013, is sample of accession, Daucus syrticus Tunisia.
The sample, Ames_29108_07ncao01_SD:NC7.100SEEDWGT.TRANSFER.FROM.NC7IV.TABLE, is sample of accession, Daucus syrticus Tunisia.
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Project: 
NameDescription
TreeBASE study 15477: A phylogenomic study of Daucus. There are six analyses from this study providing six trees available in CarrotOmics.
None of these trees is present in the referenced publication. None of the trees in the referenced publication are in TreeBASE.
Note that publication title is different than the TreeBASE study title.
TreeBASE Study S19872. This study contains 25 trees. One tree (Tr98472) corresponds to figure 2 in the reference publication, the remaining trees are supplementary information.

Traits evaluated: ANTHER COLOR (ANTHERCOL); BRACT LENGTH (BRACTLEN); NUMBER OF BRACT POINTS (BRACTPNTS); BRACT WIDTH (BRACTWID); BRACT LOBE PAIRS (BRCTLOBPAR); FLOWER RAY NUMBER (FLWRAYNUM); FOLIAGE COLOR (FOLIAGECOL); INVOLUCRAL BRACT POSITION (INVOLBRACT); LEAF PUBESCENCE (LEAFPUBE); LEAF TYPE (LEAFTYPE); MATURE LEAF LENGTH (MATLEAFLEN); MATURE LEAF WIDTH (MATLEAFWID); MATURE PETIOLE LENGTH (MATPETLENG); MATURE PETIOLE THICKNESS (MATPETTHK); PIGMENTED CENTRAL UMBEL COLOR (PCUCOLOR); PIGMENTED CENTRAL UMBEL (PCUPRESENT); PEDUNCLE PUBESCENCE (PEDUNCPUB); PETAL COLOR (PETALCOLOR); PETIOLE HAIRINESS (PETIOLHAIR); PETIOLE SHAPE (PETIOLSHP); PETAL LENGTH CENTRAL (PETLENCEN); PETAL LENGTH PERIPHERAL (PETLENPER); PLANT HEIGHT (PLANTHEIGH); PRIMARY UMBEL FLOWER HEIGHT (PRIMFLWHT); PRIMARY UMBEL DIAMETER (PRIMUMDIAM); SECONDARY UMBEL DIAMETER (SECUMBDIAM); SEED LENGTH (SEEDLENGTH); SEED WIDTH (SEEDWIDTH); SPINE CURVATURE (SPINECURV); HAIRS AT BASE OF PRIMARY SPINE (SPINEHAIRS); SPINE CONFLUENCY (SPNCONFLU); LENGTH OF SECONDARY RIB SPINES (SPNSECLENG); NO. OF SPINES ON SECONDARY RIB (SPNSECRBNO); BARBS AT TIPS OF SPINES (SPNTIPBARB); STAMEN LENGTH (STAMENLENG); STEM DIAMETER (STEMDIAM); STIPULE WIDTH (STIPULWIDT); STYLE LENGTH (STYLELENGH); STYLOPODIUM LENGTH (STYLPODLEN); STYLOPODIUM WIDTH (STYLPODWID); UMBEL SHAPE - FULL BLOOM (UMBELSHPFB); UMBEL SHAPE - MATURE SEED (UMBELSHPMT)

Evaluation location: Iowa, United States. Method: Daucus descriptor data recorded from observation planting Field N-10 at the NCRPIS farm (42 degrees 0 minutes N latitude 93 degrees 30 minutes W longitude).

Traits evaluated: HUNDRED SEED WEIGHT (100SEEDWGT)

Method: This is the generic evaluation method that can be used for transferring hundred seed weights from the prod.nc7iv table to the prod.ob table. The prod.ob table is where the values for the descriptors are stored.

Hancock, Wisconsin evaluations for Alternaria resistance in 2014

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Analysis: 
NameDescription

TreeBASE Tree Tr71398 from study S15477. Original tree name "Tree1". This tree is not present in the publication

TreeBASE Tree Tr71399 from study S15477. Original tree name "Tree2". This tree is not present in the publication

TreeBASE Tree Tr71400 from study S15477. Original tree name "Tree3". This tree is not present in the publication

TreeBASE Tree Tr71401 from study S15477. Original tree name "Tree4". This tree is not present in the publication

TreeBASE Tree Tr71402 from study S15477. Original tree name "Tree5". This tree is not present in the publication

TreeBASE Tree Tr71403 from study S15477. Original tree name "Tree6". This tree is not present in the publication

TreeBASE Tree Tr98472 from study S19872. This tree corresponds to figure 2 in the referenced publication

TreeBASE Tree Tr98473 from study S19872. Original tree name "PAUP_2". This is a supplemental tree not present in the referenced publication.
TreeBASE Tree Tr98474 from study S19872. Original tree name "PAUP_3". This is a supplemental tree not present in the referenced publication.
TreeBASE Tree Tr98475 from study S19872. Original tree name "PAUP_4". This is a supplemental tree not present in the referenced publication.
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Feature: 
NameUniquenameFeature Type
S15477_Daucus_syrticus_A29108
S15477_Daucus_syrticus_A29108
DNA
S19872_Daucus_syrticus_Ames_29108
S19872_Daucus_syrticus_Ames_29108
DNA
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Stock Center: 
GRIN Accession
Data Year: 
2007
Image File: 
There are 19 images.
ImageAnnotations
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2008-07-23
  • File Name: Ames_29108_07ncao01_SD_PL_UM_2008-07-23_01.jpg
  • legend: Ames 29108 07ncao01 SD | 2008-07-23 | NPGS Digital image of Daucus umbel
  • photo provider: Reitsma, Kathleen, Iowa State University
  • sample: Ames 29108 07ncao01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2008-07-23
  • File Name: Ames_29108_07ncao01_SD_PL_XX_2008-07-23_01.jpg
  • legend: Ames 29108 07ncao01 SD | 2008-07-23 | NPGS Digital image of Daucus plant
  • photo provider: Reitsma, Kathleen, Iowa State University
  • sample: Ames 29108 07ncao01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2007-09-07
  • File Name: Ames_29108_07ncao01_SD_SD_MS_2007-09-07_01.jpg
  • legend: Ames 29108 07ncao01 SD | 2007-09-07 | NPGS Image of sample of original seeds
  • photo provider: Reitsma, Kathleen, Iowa State University
  • sample: Ames 29108 07ncao01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2012-06-13
  • File Name: Ames_29108_08ncai01_SD_PL_LV_2012-06-13_01.jpg
  • legend: Ames 29108 08ncai01 SD | 2012-06-13 | NPGS Scanned image of Daucus leaves
  • photo provider: Reitsma, Kathleen, Iowa State University
  • sample: Ames 29108 08ncai01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2012-07-11
  • File Name: Ames_29108_08ncai01_SD_PL_XX_2012-07-11_01.jpg
  • legend: Ames 29108 08ncai01 SD | 2012-07-11 | NPGS Digital image of Daucus plant
  • photo provider: Reitsma, Kathleen, Iowa State University
  • sample: Ames 29108 08ncai01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_29108_08ncai01_SD_PL_LV_2013-07-02_01.jpg
  • legend: plant
  • sample: Ames 29108 08ncai01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-08-29
  • File Name: Ames_29108_08ncai01_SD_PL_LV_2013-08-29_01.jpg
  • legend: plant
  • sample: Ames 29108 08ncai01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_29108_08ncai01_SD_PL_UM_2013-07-02_01.jpg
  • legend: umbel
  • sample: Ames 29108 08ncai01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_29108_08ncai01_SD_PL_UM_2013-07-02_02.jpg
  • legend: umbel
  • sample: Ames 29108 08ncai01 SD
  • accession: Ames 29108
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_29108_08ncai01_SD_PL_UM_2013-07-02_03.jpg
  • legend: umbel
  • sample: Ames 29108 08ncai01 SD
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