adegenet: a R package for the multivariate analysis of genetic markers.

Resource Type:

Publication

Publication Type:

Journal Article

Title:

adegenet: a R package for the multivariate analysis of genetic markers.

Authors:

Jombart T

Series Name:

Bioinformatics (Oxford, England)

Journal Abbreviation:

Bioinformatics

Volume:

Issue:

Page Numbers:

1403-5

Publication Year:

2008

Publication Date:

2008 Jun 01

URL:

https://doi.org/10.1093/bioinformatics/btn129

DOI:

10.1093/bioinformatics/btn129

ISSN:

1367-4811

EISSN:

1367-4811

Cross Reference:


PMID	18397895

Citation:

Jombart T. adegenet: a R package for the multivariate analysis of genetic markers.. Bioinformatics (Oxford, England). 2008 Jun 01; 24(11):1403-5.

Abstract:

UNLABELLED
The package adegenet for the R software is dedicated to the multivariate analysis of genetic markers. It extends the ade4 package of multivariate methods by implementing formal classes and functions to manipulate and analyse genetic markers. Data can be imported from common population genetics software and exported to other software and R packages. adegenet also implements standard population genetics tools along with more original approaches for spatial genetics and hybridization.

AVAILABILITY
Stable version is available from CRAN: http://cran.r-project.org/mirrors.html. Development version is available from adegenet website: http://adegenet.r-forge.r-project.org/. Both versions can be installed directly from R. adegenet is distributed under the GNU General Public Licence (v.2).

Publication Model:

Print-Electronic

Language:

English

Language Abbr:

eng

Journal Country:

England