Resource Type:
Gene
Organism:
Name:
LOC108214664
Identifier:
LOC108214664
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017386793.1, is a part of gene, LOC108214664. |
| The genetic_marker, MK017652 3_35343438, is located in gene, LOC108214664. |
| The genetic_marker, MK007602 TP180362, is located in gene, LOC108214664. |
| The genetic_marker, MK001090 GSSR-091, is located in gene, LOC108214664. |
| The genetic_marker, MK007600 TP118009, is located in gene, LOC108214664. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017386793.1 | XM_017386793.1 | mRNA | DCARv2_Chr3:35343224..35361277 |
Sequence:
ACTGAAAACGCGGATTCGTGCCACTGCTCACCCCTTTCAAGTCCTTTCTG
TTTCAGTAAGTTATGCTCACGTAATATTCAAGGAACACGAGAGTTGTTAC
ACAAGCTTTTAACGTGCATTATTAATCCACACAACAATTATTGAGAGAGA
GAGAGAGAGAGAGAGATGCAATTATATAGACTTGTAGCTTTATTCTCAGC
TAGTCCAGATTTTTTTGTCAGATTCTCCATCCACCACTTATTGTCTATAT
TCCTCTGCCACTAATGTAAGCTCTAATTTCACTTCATTTTATCTGCTTAT
ATATCCTGCCTGCCTAAAGGCTCAAGGCATTGGTTGGTAACTCAATCAGT
GCATAAAATACAGTATCTTAATTTGTTGCAGAAGGGTGATTGTTAAATTA
ATCGGAAAGATGGATATAAATAGAGAAGAGATCGAAGATGCTTGCGACGA
AAAAGAAGAAGGATCTCCCAGTAACAAATTATTATCGGTATCTTTGTGCT
GGGAGAAAACACTTGCGTTTGTGTCAACTGCTCATGCTCACCCTCGAGGC
CTTTTCATTCATCCTCAGAGCTGGTTAGCTCTCTACTTGACTTCTTTACA
CATATATGCTTGCTCACAGCGGGCTCACACCACTACATTCTTGTCTCAAT
AACATGAGATCAACTAATAGTTTAGTTTTAGAGCGCCTGGGATTTAAGTA
GTCATTTTCAACTTTAAGTGGTCGATTAAAACATTCAAATAAATAATTTA
TCAAATTTATCACGTAGTTTTTTTTTTTGAATTATTCATCACACGCTGTC
ATTATAATAATAGAAAATGGTTTATCAATTTTGACATAAATAAACTTAAT
GCTCTTTCCAATTTTGAATATTTGAGGGTGAAGCTATGTGGCCTCAATTA
GGGGTGAGCAATAAAAAATGTTTTATCAGTTTTGAAATGAACTTAATGTC
CTTTTTAATTTTAGATATTTGAGGGTGTGTAGCAATGTAGCCTCAATTAG
GGATGAGCAAAACCGGATATCCGGTCCGGTTATTAATATCAAATCGGATA
TCCAGTTTTGCGGATCTTCATAAATCAATTCCGGTTCCGATTCCGGATAT
CCATGCAAATAACCGGATAATTCAGATCCGAATTTGTTACATATAACTAC
ATTTAATTCATAAATTATTCTTCAATTAAATTATATTTTTAATCTTCTAC
AACTAAGTTTATAAATTATAAATAATTAGTAGCAACTTAAAAAAACAAAA
TTTTAAGTTTAGCATCTATAATATTATTTTTCTTATACTTCATTTAATTT
TAGTGGAATATAAAATTTAATTTTTATTATAGTTCTTATAAATGATATTT
GTGATCATCACACTGACTATATTTAATCAAATATAATGAATTCTTATATA
TATATATATATATAAACAATATAATCATAATAATTTATATTATCAATAAC
ATGTAGTGTATTATTTATCTTTAGTAAGTATATTAATCATGAAAAATTTA
TTTATTTTAGATAGAAATCAAAAACCGGATCGATCCGGATATCCGGTCTT
ATAGAAAATAATGATTAGAATTCGGATTTATGAAAAAAATGGGGATCAAA
TATCCAGTCCAATTTTTTGGATAAAATATCTGAATTTTCGGATTTTTGTA
AATCGGAATCGGATACCGGATCAGAAAATCAGATAATCCAGTTTTCAGAT
TTTTATGCCCACCCCTAGCCTCAATATTTTACTCGCCGATTCAATCATCT
AAATATCCGACATGTTCCGATTGATTTTTATATCGGAATGAAGTCAAAAA
TAATATTTACTCGAAATCTTTAGCTTTTCAACGCTCACAAGGGTGAAATG
GGATGATCGAGTATCTTATATACCTTCTCGTGCGAGAAGTCGATACTCAC
CCTAAAAAATTTAACTCATAAAGAGATTGTTCGGTTCAAGTAGCGATATG
AGGTTGGAAGAGGTATGATTTGGAATGAACTGACCCAAATTTCAGACACC
ATGAACCAAACTGCCCCAAATATATCCAAACCAGCTTAATTGAGTAAAAG
AATTCAAGAGATTAGATAAAAATAATTCCAAATCGACGCTAATCGGTACT
ACGTTCACCTGTAACTATTCAATATCCCGGATTACATCGGAGCGTTTCCG
CGGCCGAATCCACTTTGAATTTGATAACTGCATTGCTTATAAAGTATGTG
TTCGTGTATGTCCTATAGATCTGCCTGTTGTAGATTGGAAATTGGAAACN
TTGCGGATCTTCATAAATCAATTCCGGTTCCGATTCCGGATATCCATGCA
AATAACCGGATAATTCAGATCCGAATTTGTTACATATAACTACATTTAAT
TCATAAATTATTCTTCAATTAAATTATATTTTTAATCTTCTACAACTAAG
TTTATAAATTATAAATAATTAGTAGCAACTTAAAAAAACAAAATTTTAAG
TTTAGCATCTATAATATTATTTTTCTTATACTTCATTTAATTTTAGTGGA
ATATAAAATTTAATTTTTATTATAGTTCTTATAAATGATATTTGTGATCA
TCACACTGACTATATTTAATCAAATATAATGAATTCTTATATATATATAT
ATATATAAACAATATAATCATAATAATTTATATTATCAATAACATGTAGT
GTATTATTTATCTTTAGTAAGTATATTAATCATGAAAAATTTATTTATTT
TAGATAGAAATCAAAAACCGGATCGATCCGGATATCCGGTCTTATAGAAA
ATAATGATTAGAATTCGGATTTATGAAAAAAATGGGGATCAAATATCCAG
TCCAATTTTTTGGATAAAATATCTGAATTTTCGGATTTTTGTAAATCGGA
ATCGGATACCGGATCAGAAAATCAGATAATCCAGTTTTCAGATTTTTATG
CCCACCCCTAGCCTCAATATTTTACTCGCCGATTCAATCATCTAAATATC
CGACATGTTCCGATTGATTTTTATATCGGAATGAAGTCAAAAATAATATT
TACTCGAAATCTTTAGCTTTTCAACGCTCACAAGGGTGAAATGGGATGAT
CGAGTATCTTATATACCTTCTCGTGCGAGAAGTCGATACTCACCCTAAAA
AATTTAACTCATAAAGAGATTGTTCGGTTCAAGTAGCGATATGAGGTTGG
AAGAGGTATGATTTGGAATGAACTGACCCAAATTTCAGACACCATGAACC
AAACTGCCCCAAATATATCCAAACCAGCTTAATTGAGTAAAAGAATTCAA
GAGATTAGATAAAAATAATTCCAAATCGACGCTAATCGGTACTACGTTCA
CCTGTAACTATTCAATATCCCGGATTACATCGGAGCGTTTCCGCGGCCGA
ATCCACTTTGAATTTGATAACTGCATTGCTTATAAAGTATGTGTTCGTGT
ATGTCCTATAGATCTGCCTGTTGTAGATTGGAAATTGGAAACGGATACTA
GAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGAATCTGTATATTT
TGTGACTTAATTTTACTGCCTACTTAGCTTAGTCGGGAAAGTCTGATTAC
CCGAGCCGTTAGAAACCCTAAAACCCCAATTATGAAATAGACAATGGAGG
TGAAATTATATGTAAAGTGGCAATGATGATGATGATGCAGGGGATATGTG
TTGTGGACACAATTCATACTAATATGGGCAGTTTACTCCTCCTTTTTCAC
CCCGCTGGAATTCGGTTTCTTCAGAGGTTTGCCAGAGAATTTGTTCCTCC
TTGACATTGCTGGTCAGCTTGCTTTCCTCATCGACATCGTCATTCACTTC
TTCGTCGCCTATTGGGACTCTCATTCTCATTCTCTCGTCTTTAATCACAA
TCGCATTGCCATAAGGTCTCTCTCTTTCTCTTCGCTTTTTTAAATTACAA
ATGCAACAATACAATTACTCGTATTCTCTTTCTTATTCGCACACATATGC
AAATATTTGTGATTTTGAATTTTTGTGGCCAACTTAAATAGGGGAGCCTC
CTTTGGTTTTAGTGCGGTAAACTATAAAACCAACTGAAAACCAATTTATG
GCGCGGTTGTATTATATTGTGTTTCTTCATTGTGCAGTTGTATTGATGCC
GTTTCTTTTTTCGTTTCAATGTATGCTCATAATATATTAAATATTTCATG
TTTAGAAATCAAACCCTGAAACTTTCTGTTCAAGTTGGTCCGTAAAGTCC
CTCTATTCATATTAGTCCTTGATTGTTTATAAGCTAAGTAATTTACATCT
CATACAATTTTATATTCTAAAACTAAAGGAGATTATTGTCAATAATAGTT
GTGATTTCACTAATTAACTTTGTTTCAAAGAAGGCTCCTTTTATGAAACC
ATTCGGGAGAGCCATTAAAATATATTGATAACACAGTTACTACATATACA
GTTATGGCATGACAGTGAGATAGTCTGTTTGGCTATAAGCCTTCTTGGTG
CCTAAGGTAAATAGACAACATGGAGAAGGTTAGTTTTGGGATGATGTGTG
GTTTTGCCAACACCACGACATATGTCAAACAAACTAGCATACAACATACA
GAACTCATATTATATCATGCAAATGATGCATACAATCTGACCACATATGT
ATATCATGTCTCGAAAACGTACTCACTAACATTGCTGGTCTTAAGCCCTG
GTTAAAAAAGAAGAAGGTATGAAATGATTACTCAGTCCAACTTAAACTCA
TTTGACTTTTCATTTGGTAACTTGTACAAGTATAGTAAGTTTTGATTATT
TTGTTTCTCATGTATGTTTAGAATTGTTATTTAGAAAGAGTTCTTAAATT
GTCTAATGATTGATGAGGTTTAGAATAGAGGAGATTATTTGTTGCATTTT
CCATTCGGGCTCTTGAGGTGAATTACTGGTTTTCTTAAAGACGATTTTCC
TTCATGTGGTTTGGAATCTGATTAATGTTTTTGTGTTGGGAATTTTTATT
TGGCGTGATAAATTATATGGTTCAAGTGTATACTGGTCTGGAATGACATG
ACATGGGTTGCTTTTATGATTGTTTTTGCATCACGTTTTGTAACATATGT
AACAACTTATCAACCATCATAGTATCTTTGATTATCTTTTGAAATCTCTC
TCATGCTTGTTTTCCTTTGTGGTGTTATTATTTAGATCTAGATCAGTTGT
TTGGTTATGTTTGTTCCAGAAGGTAGGTGTATGAGGAGATGAGGAAGTTT
CACTATCAGTTCTAACTCGTATAATTTGTGAGTATAACATCTCTGTATAA
ACAAGTAGTGGGAAAACGTTTACCATGTCTAGCATTAGTAGATTCTGTAT
ATGTAATATCTATGACCAGATACATAAGGTTATTAGAGTCAAGTGCATCA
TTTCCAGGATGTTGTTTCGCTATATATAGTATATCTGATATATACGACTA
TACGACTACACACAAAACGTATTTAGAGTCAATTGCATTATTTCCATGAT
ATTTTCATTTCCACATGCTTCATACAACGTCTTAGCTAGTTTATTGGACA
TACATGGTTGTGTTAATTATAACAGGCTCACATCACCCTAAAACTACCCT
TCTCCATCATATTTCTCTACTCAGCACACCTTCCCATTGGTTGTAATAAA
CAGAAGAAGGCTTATACAATTTGATCTGCTGAAACCTTGTTGCAATAGTT
GTGGAATTAGAATACAGGCTCACTCTCTTAAATGGTTGCGGCTGGGAGAA
AATGGTCACTTTCCTTTCAGAGATTTGAAACTAACCCATATACTGCAATC
TTCTTTAGGAGGTACATTGAGCTCTAGAATGTCAAGGTTGATTGGGAACA
ATGTTAAATTTTGTGGATGCTATACTTCAAATGAAATGCTCTAATTTGAT
AACTGTATAGTGATACTGTAATAGTTTATTTACACTGAACTCACATTCTG
TATATATTCAGATTGTAATTAAGCTAAAAATGCAGTTTTGCAGTTCTTGC
ATTATTTGACTTATATTTACAGGGCTAGTTGTAGGAACTTGCCTGAGGTC
CAAAACAATTACCAGTTGGTGTAGCGAATTTTAAGGTGGTTGTGGACCAT
CTACTATCGAAAAAGATTTCACCATGTAATGTACTAGTCACATCATTTTC
TGGTAGAATACTCTGAGACCTTCGGCATTTGCTAGACAAGTTACTAAGAT
TAGTTATACCATTTTATAAACACATCCCCCAAACACATTATTAGGACTTG
TCACATTTCATTTTGTACCTTGGTCAGTAAACTTTAGGTTTATTTGTGTA
CCCATAGATTCTACTTTGCGGTGTTCATATTTTTAGTTGGTTATGTACAC
CCTTTATTGTTGCAGGTATTTGAAATCACGTTTTCTAATTGATTTTCTAG
GTTGTTTGCCTTGGGATGTTATTTACCAGGTACTTTTTCCTTTCTTTTTT
CTTTCTTATCTTGTATGGATCAATTTGTCATGCAATTTATATATATAACT
ACAATTCCTACATTGTCTATCCTAGGTTGAAGGTCTTCTTGGCTTTGTTT
CAGTTTTTTGCATATACTTTTTGTTTGCTATATCTGGATATAAAATTCCC
TCCTTTGTTGCCGAGAATGAGCTTAAATATATTAATTTCTCAAAGTTGTT
CTTTGTATGCATAAGAAAATGTTATTATTGGTCTCATGTTTTGTATTAAC
TTACATACCTTTCCAATTATGTTACCTTCTCCAATATTCTGCTCCAGATC
ATTAATAATGTTGCAGCCTGTAAATTTAATATCTGAGCATGCAAGCTCAA
TATTTATTTTCTGGACATTTAGTTTAATATTTTTTCAGCCCACTAATAAT
TCAGCTGCTACCTTTCCTATGTATATTTATCAATTTACCACCTCTATCTC
ATTATAAGACCCTGACAAGAGTTTGTAGTGGTGATGTACATGTTCCAAGT
GAAAGTGGCAGCACATCCTCTTGATTCTTCTAAAGCACTGCAATATTTTT
AGTATTTCAACTCTTTTGGTTACGGATTAAGTGTTGTGATTAGGTTTTGT
TATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGA
GAGAGAGAGGAAAGTTCTATGGAGACCGCTATTTCATCGGAGACCTCGGA
CCACATATGTTCTGCAATCAAAACACTATAAAATACATTATTTTGTAAAA
TATGTTCTACAAATATCATGTATTCATTAAAATTGTTGAACATTATCTGT
GTTTAATAAGTAGATAATGTATGTTCTGCAAGTTGAACAAATGTTTCGCA
AACTAAACATATTTCATAGAACAAAACATTTTGTAATGTTCCACATGTAA
AACTTATATGATATTCAAGATTTTAAATGAAATAATGATTTCGTAGAACA
TGATTTGTAAAACTATACGTTTTGCAATGTTTTTATGAAATATTTTACTT
GCAGAACATATGTGGTCTCCATGTCTCCAGAAAAAATGTGGTCTCCATTG
AACTTAACTCTTTTTCTCTCTCTCTCTCTATATATATATATATATATATA
TATATATATATATATATAGAGTTTTACTCCAATAGAAACCTTCTTATCCT
AAAAACTAAAAACCAATCTGAAATATCACTAAATCCTAAAGCAGATACCA
CTAGATTCCTAAACAACCCTATCTCCACCTCCATCTTCACCAAAACCACC
TCCATCTTCACCAACCCACCTCCATTACCACCACCTCCGTCGTCGCCTCC
TTCATAACCACTACCACCTCTATGCCGCCCGCTCCCTCCATAACCACCAC
CTCCATCTCCACCTCCACCTCCATTATTTCTCTAACAACACAACCTCCAC
ACCTCCATCTTCACCATCCCCATCTTAATCGCTGCTTCAACCTCCTTCAA
CCATGTTCATACTTCTTTCTCCACTCGACTCAACTTCAAACGCGGAGCCG
CCACTAATCCGGCAACGCTCCAACCCCCCACTTCAAGCCGCTCAAACCTC
CGCTACAATCATCCTTCCTCCATCTTCACCTTCACCTCCACCATCTCCAC
CACTATCACCACCATCTGAATTGAAAACATGAACAGATCTGGAGATTTTA
AGCTGGAACATATCTGGATATTAAATTTTCACTAATTCCTGCAACACATA
TCACTAAATCCTAAAGAGAATATCACTAAATTGTACTGAGAATATCACTA
ACTTGTATTGGTTTCTAGTTTTTATTTTAAAATTGGTTTCTATTTGATCA
TTAGCCTATTTTTAAAATTGGTTTCTATTTGATCATTAGCCTATATATAT
ATATATCGTGGTATAAACATTATCTGGTCTTATGAATATGTATGAATATG
TAGTTCAATAGTACAATAATTTTTTTTTGAGAGTATGAGACATGAAAGAA
TTTTAATATTAAATCACATGGATATAGTAATATGTAACTGGATATAGTAA
TATCTGGATATTTGAAGATGCAACTGTAATATGATATAGTAATGGGTCGT
TCTATTACCTCTTCACCTCTAACTAGACCATGTATTCCTTTCAGGCTAGT
GGCAGGAAGGAACCAGTCAGGTATCTATTGTGGATTAGATTAAGCCGGGC
TGTCAGAGTGACCGAATTATTTGAGAAATTAGAAAAAGATATTCGTGTCA
ATTATCTTTTTACAAGGATCATCAAACTTTTTGTTGTTGAGCTCTATTGC
ACGCATACAGCTGCTTGCATATTTTACTATCTGGCTACTACACTGCCACC
GGCACAGGAAGGTTATACATGGATAGGAAGTTTAAAGATGGGTGACTACA
ATTACTCTCATTTCAGAGATATTGATCTTTGGACGCGCTACATTACATCA
TTATATTTTGCCATTGTTACGATGGCAACTGTTGGTAATATTTTCTGAAA
TCATCTGCATTGCTTAAACATATTGTGTTGCTTATGATTGTTCATATTTC
TCTTGACATATTCAATTGGTATGACATTAGATAAGTGATGCATCTAGATG
TGGGATCCCTTAGATGTTGCTCCCAATGTTGTAAATTCATGATTGTTTTT
TTCTCTTCCATACCTGGGGGTCATTTGTTAAATCTGAACCATGTTTTCTG
AACAGTTAAAATATTTGGATGATCTGAGCGAATAGTTATTATGCCAATCT
GAATCAGTAATGTTGTTTGCTAAATTTAATGTAAATTATCTGGAAGGTTG
CAATTTACTTTTATACCCTGCTAAATGATTAATAGTGTTTGACAGGTAAT
CTATTTTATCACTTGAATGATACTAATTTTTATTTTCAGTCAATTAGATA
TTAGAAAAACCAATAAACAAAATTAGAGTGTTTATATAATTATTAAATTC
TTCAGTCGTAAAAATAACCAAAAAAGAAATCTTTGAAAGTTGCAACTTGC
AAAGCAATTTGATCACAAATATCATTCATACATTGTGCAGCTTGTGTTCC
CCATTGGGTAGGTGTACCTTAGATAGGTGATGCAGGACAAGCAAGGGAGA
TTATTTTTTTTAAGTGCAACTAAAACATGGGTGAGCTGAAAGAAGGATTA
ATAGTTATCATGTATCAAAGGTTTTTGCCTTAAGTTTATTGTAGGATTTC
GAAAAGATAAGCATACTAAAGGATATTTGTGTCATTAACGATGTGTTATA
TGCAACCATAAATATACAGATCATGATTCCAGGTTGAAGTACATAAAAAT
GACGAAAGTTAATAATCGGTTGCAGAGACTCCAAATTAAAGATGATTTCA
TCCCAAAACATAGCAAATTCTTGTCAACTAATTCTCAGTGACTTCAGAAA
AGCTCTCATTTAGTAATCCATAAATTCTTGATCATTTTGTGCATTTAATT
TTTTTTAACACGATTGCTTGTTTTGCCTTGCACTCTATTCCTATGTAAAT
GCACTCTGCTATATGTTCCTGTTACAGGTTACGGAGATGTACATGCAGTG
AATAACAGGGAAATGATATTCATCATGATTTTTGTCTCCTTGGACATGAT
TCTTGGTGCGTATTTACTTGGTAATATGGCTGCACTGATCGTAAAAGGAT
CAAAAACTGAGAAGTTTAGAGATAAGATGTCAGACCTTTTGGAATACATG
AACCGAAAGAAACTGGGTAAGCAGATATTTAATGAGATAAAAGGCCATGT
ACAATCACAATATGCGAACAGTTGCACAGAGGCTGCTGTCCTCCAGGATA
TTCCAATTTCCTTTCGAGCCAGGGTATTTTTCTGAAACTGCATACCTTGA
CATTCTAATTGTAGTTATTTATGTTCTTATGGCTTGATAACTACTCAGAC
ATTTTGCTGAGGAGAACCCCCTCCCTATTATTAAAAAGCAATACAAAACT
AGCTGAATCAGGAACAGATGTTACATGTAGCCCTTATGTATTGCTTTATT
GAGCGGGTACCAAGATGGCTACATGATGCATTCTGATATTCTGAGGAACT
GTTTTCTCATATTTACTGATGATATTTCTGTCTTAACCTGGTATATGATA
TCACACTATGTTTAACTTGAAGTCTGCCATACTCCCATCATTTATATTTC
ACAAAAGAAACTTCAGTACAAAGTGCTCAGTTCCTTTTGCAAAATTACAA
CAAACATCTTGTACTCTTTGGTGTATTGACTGCAAAGTTTCAAGGAACAT
CTTGTACTCTTTGGTACGTTGACTGTAAAATTTCCATGCAGATCTCAGAA
AGGTTATACGTGCCGTATATAAGGGAGGTTCCTATTTTCAAGGGTTGCTC
ATCTGGATTCGTTAAACAGATAGTAAGTTACTTCTGAACACCCAAGTCCA
TGTCAAGGCTAGTCCATTAACAAGGTGCTTTGTCTGTTCTACAGTATTGT
GTTCTAATAGTTCTGAGCATTATGTTGCCTGGTCTCAGATACTCAAGAGT
TCCTTGAAATTGTAATTTCTGTACTTATGCAGAAGAGGAAATCTTGTTTA
TCATATAGAATGTTCTTCCCTTTAACTATGAATGAGAATTAGGTAGCTAC
ACTGTAATATGTAAAATGACTAAATGAGGAATCTGTAATAAGCAGTACTT
CCCCTTTTTCCTTTATAAAAATATCTTGTCGAAACTTTCCTAAANGTGGG
GGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTG
TGGTCTTATAGTTTGTATTTTTTTGATGATTTAAGCAGCCCTGTAAGTCA
AAGCTCCATCCTTTTCTTTGAAAGCCATCCTTGAATTGTGATTTGCACAG
GCGAGCAAGGTACATGAAGAAACTTTCCTTCCAGGAGAAGTAATTGCAGA
GCAAGGAGATTTTATGGATCAGCTCTATATAGTTTGTCATGGTAAGCTGG
AACAACTATATCCAATTTGACATTTTCTTATGGTTATGGGCATATATCCC
CCCTGAACCCATCTAATTGCTACAAAAAATTCCATGAGCGAAGCTTCTGA
ATTGTTAGGTGTATCTCAATTGCAGCTAGGCTCAGCCTCGGGTATTGTCT
AGAATATCTTTTTATTGAGCATACACAATTTGGAGTCAAAAATTCATGAA
ATATGGTAAAGTCAAAGAATTAAACTAAATCACTCATGTCTACTCAAATT
AGGTAGATCCTTAAGGCTTATGTTAGTACTTGGTCAACAATTAGGAATTT
GGGATTAATTGTGAACTGTGCATGATCTTAGAGTCGAGCCATAGGTTTAT
CATTGATACATGGCAATATATCTCTCTAGACCATGTATACTGACCTATTA
TAAATCACTACAAATGATATGAGCACGTGCAGTATTACTCGTGAATCAGA
ACTGTATCACACTGGATCATGATTCGGTTGAGCTGAAGATTATTCATAGT
CTTCTAGTGTAGAATTCATAGCCAAGCCAACACATGTTTTCGTACTAATA
GTTATACTAATGACGCCCAGCAATTTTCTAAGTCTTTAAATTTGAATTAA
TTGGTTTGTCCAGCCATATATATTTATACTATATTATTAAAACTAAACAT
ACAAAAGTTTCGTTGTTGGTTTGTAGTCTAGTATAGTGGATTATAACTGT
TAGATCACCTGAATTAAATTGATTATAACCGTTAAATTGAATTTTTTGTA
TTTCACTGTCTATGCTACTAAAGGTCTAAAGTTCAAATCCCATCAACAAC
ATATTAAAATATTTATTATAATATATATCTAACATAATAATAAATAGGGG
TTGAATCCCGTGAACATATTAAAACTACACACACACACACACACACACAC
ACATATATGTGTGTGTGTGTGTGTAATTTAATTCTAACAATGCAAATAAA
GTATATTATTATATTTTATTATCGACATTAAATTTATTAAATTTAAATAC
ACAAATAATATTTAAAAAAATATAACATAGAATGTTTGGCTCTGGCATGA
CACGGGTTATAAATTAGCATGCATGGAACATTCTACTCCACTATAAACCT
CCTTAGAATAGAAACTAGAAACTAAAATAAAAAATTTCTAAATTGCGTCG
AATTAGAGAACATATGGTATGTAAATTGATCGTTGGGAGATGAAAACAAT
ACAGTGAAGTCGAATTTAAAAAAAAAAAAGCTCACCGATTGACGGGAAAA
ATCAAATTAAAAGCGGAGGGGATAATGTGGGATCATGTATAGGAGGGTGT
ATATGAGTTGTGTGTGGTGCCTTCTAGGAGCCATTAGATTAGATTGATGT
AAGGACTTAAATCAGTTTCTAGTTTCTATTTTAGTTTTGGTTTCTATTTG
ATCAATTGCCTACATATACATATACATATACATATACATATACATATACA
TATACATATACATATACATATACATATACATACATACATACATATATATA
TTATATATCTATATTAATTACGTGTTTTATATGTAGTGTATTCCATATTC
AGCTTGTTTGCAATATTTTGTAATTAGTGGAAGGCTGGGAGATTGTGCAG
GAAAATTAGGAGGCACTGAAGGTGAATTCGAAGAACCTGTTCACTTTCTA
CAGAGTCACAGTTCACTAGGCGAAATGTCTGTTCTTTGTAATATCCGATT
ACCGTACACAGTTCAAGTCCTTGAAAATTCAAAGTTGCTAAGACTTGATA
AGCAATCATTCCTAAACCTTCTTGATGTGTACTTCTCAGATGGGCGGTTC
ATCATCAATAATCTACTTGAGGTGAATCAACAACTCTGTTTAATCTTGTC
ATGTTTTTGTGTTTGGAATGTGTAGTTCGGTGGTGTTTGGGGGGGGAGGG
GGTCTATATTGTTTGTTATATGAGCGTGCCCAATAATTATATAAACCTTG
GCTTGAAAACCAAATTGCTAGAGAATTCTGGGTCAGTCAACTGCTAAATA
CTTGTATTGCATAAACTGGCCATGTTTTAGAGTTTTTTGTAATACTATCA
TCACCTTACAATACAATTAACTTCTGTTATGTCGTTCTTTTTTATTTGCA
GGGAAAAACAACCATCCTTCAGAACAAGATCTTAGAGTCTGATATAGTAC
TTCATATTGGGCAACATGAATCTGAGTTGGCTATGAAATTAAACTGCGCT
GCCTTTTATGGAGACCTCCCCCGCTTAAAACGTTTAGTTGCAGCTGGAGC
GGATACCAGCAACACTGATTATGATGGGAGATCACCTCTGGTATCAGTTA
TATTTTTATAGCAAAATTCATATAATTTTATTGTATTTATCTCATGTGAT
TATTTTCAATACTGATTCTAGTTTTTGTGAAGTAATATATATCTACAATC
TCCTATACACTCCTGTGCACAGAAGCAGACTAAGCCCAATCTCATTCACA
TTTATTATTTAACCGCAGTAATTTAAAGGTGTTAAAGAATCATCTGACGT
TAGGTGTTTCTCTTGAAATTTTGGTGAATGCATTAAATCTGGACTCTGCC
TAGGAAATAACTGCTGAAAGATTCCATCGATAAGAAATTAAATCAGCCAT
GCTTTTTGACAATGTTCTAAATACTATAAGACAGAATTTCTAAGATCCAT
CTTGTAAGTTGTTCCATATACGAACAGTTAGCAGTAGTGTAATTGCAGTT
TTGTACCTAGAGTGCCAAATGTGGAATGGTTCCTTAGACCAAGATAATGT
TCATCAAATATATGGATCTCGATTCTATGGCTTCCTGATGATACTTGGTC
ACACCATGAAATGGATTAATATATGGAACCACGTCTTAATGGGTGTGGCT
TTTTGGATCATATTTTTGTAGTTATTGTGCACTGACAAATCATAGTTGTG
CTCTGATACATTGTGATCCACGTAACTGGATGATGTATTATTGATCTTAT
TCCATAATGGGGCATGATGTACCAAACTACCACTCGTAATCCGCGCACCT
AATAAGAAATGCACATTCTTTGGGCAACTTTTCTATACTTCACTAGGGCT
CCCATATTCTCTCATCTTAAACATTGTTTCCTATTGGCCTAAATGACATA
ATTATTCAAATCAATATTCTTTCTATGACAAGTATAATGTTTGTAAGGAA
ACAATTGCATAGTGTTATTTAGGGAAGCAAAAAAAAAAAAGTNAAGGAAA
CAATTGCATAGTGTTATTTAGGGAAGCAAAAAAAAAAAAGTGGCTCCTCA
CACCAAAAAAAATTCTGCACATACATATTTTTAGTTTGAATTATCGATAA
AAGTTAGTTACTAAAATGTCAGCTTTGGGAATCAATAAATGCCCAAGCAA
TGACAATGGTGCTCCTTGCTCTTGATTCTTATCTCCTCCTTCCCCTATAC
TTAAAAAGATATCAGCTGTTAAAAGTACACAATGTTGGTCATTCAGTGTC
TTGTTTAAAGTCAAATTTACTCCTCTTATATCCTATTGCTTGTATATTTA
TGCTCTCTCTGTTGGTTTGTTGTGTATTCTATCTTGTGTGTGCCTATCAA
CCGACACATTCTTAGAACTTATTCTGTTTTGTCACATATGTATTTGCCTC
TGGCATGATCACAGTCTATAGCCTTTTATTAATGATACTTTCTCTATTCC
AGCATCTTGCTGCATCAAAGGGAAATGAAGATATTGTTAAGTTTCTCCTT
CAAAAAGAGGCAAGAGTCAGCATCACTGGTAAGCCACCTCATTTTCCAAT
GTCTCACTCACTCTCACTCTCAGTTACACTATGAGCTTTAGACTTTGCAT
CCAAGACCTATTGGATGTCAAATTGTAAATTCACACTGTGTTATCTTTCG
TAACAGATAACTATGGAAACACTCCATTACATGAAGCGATAAAGCACAGT
CATGAAAGTGTTGCTTCTTTGCTAGTAAAATCAGGGGCTTCTCTTGATAT
AATCGATGCTGGGAACTGTCTCTGTATGGCTGTTGTTAGAGAGGATTTCG
ATTACTTGAGGAAGGTCATGGAAATTGGAGCAAACCCAAATTCTAAAAAT
TATGATCTGCGGACCCCACTTCATTTAGCTTCATCCAAAGGATTATATGC
AATCGCACATGTACTTTTGGACGCTGGAGCAAGTGTATTTGCAAAGGACA
GGTACAGCTTTTTATTATTGTCCTGTGGTAAAATGATACATAGAGCATCT
CCATTCTCATTCTTTTTTAATTTGGTCTTATACCAGTATTCCATTTGTCA
TATTTTGTGATCAAATATATTATTTTTTTAATAGATGGGGAAACACTCCG
CTTGATGAAGCAAGGATAGGTGGAAATAAGACTCTAATACAGCTACTGGA
AAATGCAAAGCATGATCAGCTTTTGAAGTTCCCTAATTGTTTGAAGGGAT
TCCAAGGTACTAATATTCTATCTAAAAAATTTATCGGTTTCGTGTTTTGC
TTTGAGGAAATTCTAACCTAAATTTAAGTAGCAGGAAACGATGTACTCCA
CATATTAGGCTTTAAAAACTGTTTTAGGATACGTGTGTACATCCAAGGAA
ATATACAAGACCTGCAAATGAATTGTTTGTTTTTTAGACCCAGTTTTCTT
GGCTATCTAGAGGCTTTTGTCTAGTTACAGGATATTAGGTACATGGTGGT
ATAATTAGTTACACTTACTGGTATCATACAGTGTATATAATATGAAAGGG
CAGGGCTGCAGACGTTTTGAGTCGCTGAAAAATGGCCAAAGCAGCAAAGT
CCATAACTAAAGTTTTAAGGGAAGGGGAGCAAGACAAACAGGGGAGAGTT
GCAGCTTGGCATATATGGTTTGTAATATGACCTGCAATTTTTTCTCAGTT
TTGACCTCTTCCTCTCTCATCGAGTTTGTTTGTCCTTTCTTTTATGTTTT
ACCCAATATTCATCTGCATGAGTCAGATGCAAGACCAAGCCCTCATAGAT
GTCCTTATAGCAGGATAAGGGCTCTCTGACGTGCAGTGTCCCTCGCCTTA
AGGACTTCCCTTAAGCTGACCCTGACCTGACACTATGGGGCAAGTAGGCT
TCAAAACACTATTGCCGTTTGTCGAATAGACATCCATATGATCCTTTGCT
TTATATTAATTTTACTTGTTGTGGACCTTAAGGATCTGTAAACTGAAATA
ACCTGTACATAGAAGTATGAAACCAAGAATCGGCAATTATCTAGTCACCT
TATAGCAAATTCCTCATAGTTGGTGCCCAGGCGTTCAAGCACTTGATAAT
CGCCACATCTCAAGAAACTATGGTAACCATTTTAGTGGAAATTCCTATCA
TGTGCATCCTTATATGAGCTTTCCCTCGTTTCCAGCCAAAAGAGTTAGTA
TATGATCTTCTCTCTACCCACAGCAGCTACTTACATGTTTTCTTAAAACA
GATGTGCAAAGGAAATGCACTGTTTTTCCCTTCCACTCATGGGATCACCA
AGAAAGAAGACTAGGGGTTGTGCTTTGGATTCCACAAAACATTGAGGAGC
TCATCGAGGCGGCAAAAAAGCAGCTTAAGCTTCCAGGTTCTTGTTATATA
ATAACAGAGGATGGGGGTAAGATTCTGGACTTGGGAATGATTTGTGATGG
CCAAAAGCTATTTTTGGTGAGTGATAATTCTGAAACTTAGGCCTAACTGT
ATTACTGAAAATAAGCATAGTTAAGCTAAATATAAAAGTCCAGGGTGGTA
GCTGGAATGTTTACATACACACTGTAACCGATGATGATGCAGATTTGTAT
AAAGTTTACTTATTTGTATCATCTTAATCAAGTGAATATATGTAAACCAC
ATCAGTCGGGATATCAACTTCAAGATTTCAAAGGTTCGCAGGATGATATG
CATATGCATATTATAAAATAGAATAAACAGAAGTACTGAATAGATTTTCT
TAAAATACCCAAATTTTTATATCAGCGCAATTGAGTTGCTTATAAATCAA
ACTACCAATCAAATGTAGGATTAAACAAGCAGGATTTCATTATAATTTAA
AAATGAATTTTTGGCCCTAGTATTCTTGAGCTCCACCAGAATCTTGATTA
TCTGTATATGTTGATCCAAGATTAACATACACAGATGAAGTAGCACCATC
TCCCCCAACACCACCCATCAAACCCTGCATTAAATTCTGACCGACTTGCT
GCGCCGCCCCTTCAACTAATCCTTGAAGCGCAGCATTCATTAGTCCGCCA
GTTGCTGATGGATAAGTTTGTTGGGGCTGCATTTCCCCCACACCTGTCAC
TTGATAGCTCTGCGGAGGCGGCATCCCCCCCGCACCTGTCACTTGATAGC
TCTGGTGACGAGGCATTCCCCCTGCACCCGTCACTTGATAGCTCTGCTGG
GGCGGCATTCCCCCTGCACCTGTCACTTCATAGCTCTGCCGAGGTTGCAT
CCCCCCTGCACCTGTCACCGGATAATTCTGATGCTGCACCCCTGTCAGGG
GATAGCTCTGCTGTCGCTGCATTACCCCTCCCAGTGTCCCTGGATAGCCC
TGTTGGGGCGGCATCCCCCCTCCTGTTGTCACCGGGGAGTTCTGTTGCCG
CTGCATTCGGCTGTTATAGTAGTTACCTGGAGGACCTTGCTGCATCTGAA
TGCCAACACCAGTATACTGAAAGCTTGTTGTTTCAGGTACATTCTGCTGT
GTCTGAATGCCACCGGTGATTCTGTTTCCTGGATTGTTGGACATTGCCGG
AAAATTCTGATTTCCCTGCAGCCTGCTGGAATTTCCACTACTGGGACCCT
CGG
Sequence Length:
18053
Sequence Checksum:
e3710a980ed8e2a2719b75717e9c9680
View location in JBrowse:
Gene:
LOC108214664
Gene Biotype:
protein_coding
Gbkey:
Gene