Resource Type:
Genetic Marker
Name:
MK001043 GSSR-044
Identifier:
MK001043_GSSR_044
Organism:
Marker Type:
SSR
Publication:
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
- Ali A, Matthews WC, Cavagnaro PF, Iorizzo M, Roberts PA, Simon PW. Inheritance and mapping of Mj-2, a new source of root-knot nematode (Meloidogyne javanica) resistance in carrot.. The Journal of heredity. 2014; 105(2):288-91.
Cross Reference:
| NCBI Nuccore |  |
|---|
Relationship:
| Relationships |
|---|
| The genetic_marker, MK001043 GSSR-044, is adjacent to primer, GSSR-44-F. |
| The genetic_marker, MK001043 GSSR-044, is adjacent to primer, GSSR-44-R. |
| The genetic_marker, MK001043 GSSR-044, is located in gene, DCAR_027121. |
| The genetic_marker, MK001043 GSSR-044, is located in gene, LOC108200102. |
| The marker_locus, GSSR-044, is an instance of genetic_marker, MK001043 GSSR-044. |
MapViewer Marker Map Positions:
| Map Name | Linkage Group | Position | Locus | MapViewer |
|---|---|---|---|---|
| 2015 HM3 | Chr8 | 0 | GSSR-044 | MapViewer |
| 2015 SFF×HM2 | Chr8 | 18.689 | GSSR-044 | MapViewer |
| 2014 J.Parsons Th. Br1091×HM1F3 | Chr8 | 44.11 | GSSR-044 | MapViewer |
| 2014 J.Parsons Th. Fig_3.5 | Chr8 | 44.69 | GSSR-044 | MapViewer |
| 2015 MB Merged | Chr8 | 44.69 | GSSR-044 | MapViewer |
| 2014 J.Parsons Th. SFF×HM2 | Chr8 | 18.689 | GSSR-044 | MapViewer |
| 2014 Mj-2 | LG08 | 40.9 | GSSR-044 | MapViewer |
| 2014 J.Parsons Th. Fig_2.4 | Chr8 | 44.69 | GSSR-044 | MapViewer |
| 2014 J.Parsons Th. HM3 | Chr8 | 0 | GSSR-044 | MapViewer |
Synonyms:
- MK001043
Sequence Coordinates:
DCARv2_Chr8:25930763..25931001-
View location in JBrowse:
Sequence:
ACCTTGACTTTTCATCTGCAGCACACTGTTAATAGGAGTGATTCACAGAT
ACCCCTTTCTCTTCCCTCAACTTCACCCCAGCTCACCAGGTTCTCTCTCT
CTCTCGCTCTCGCCAAGTATCTTCTGACAAATCTCTCTCTCAATATTAAA
GAATCTCTCTCTTCACACGCACACACAATCTCTCTCTCTCTCTCTCTCTC
CCTCTCTCTCTACACACACAGTAGTTTATGTGATATGTATGTTTATGTAT
CTATGCGCTGTCTCTTTACTTGCTTTGACTAATTTCCCATTATTTTCATC
GTCCAATTATGATTCTCTGCTACATAAGGATCATATCTATGATTCGAATC
Sequences:
>MK001043_GSSR_044 ID=MK001043_GSSR_044; Name=MK001043 GSSR-044; organism=Daucus carota; type=genetic_marker
ACCTTGACTTTTCATCTGCAGCACACTGTTAATAGGAGTGATTCACAGAT
ACCCCTTTCTCTTCCCTCAACTTCACCCCAGCTCACCAGGTTCTCTCTCT
CTCTCGCTCTCGCCAAGTATCTTCTGACAAATCTCTCTCTCAATATTAAA
GAATCTCTCTCTTCACACGCACACACAATCTCTCTCTCTCTCTCTCTCTC
CCTCTCTCTCTACACACACAGTAGTTTATGTGATATGTATGTTTATGTAT
CTATGCGCTGTCTCTTTACTTGCTTTGACTAATTTCCCATTATTTTCATC
GTCCAATTATGATTCTCTGCTACATAAGGATCATATCTATGATTCGAATC
This is the primary representative sequence for this feature.
Sequence Length:
350