MK000032 GGPS2

Resource Type: 
Genetic Marker
Name: 
MK000032 GGPS2
Identifier: 
MK000032_GGPS2
Marker Type: 
STS-Sanger
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
  3. Grzebelus D, Jagosz B, Simon PW. The DcMaster Transposon Display maps polymorphic insertion sites in the carrot (Daucus carota L.) genome.. Gene. 2007 Apr 01; 390(1-2):67-74.
  4. Just BJ, Santos CA, Fonseca ME, Boiteux LS, Oloizia BB, Simon PW. Carotenoid biosynthesis structural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2007 Feb; 114(4):693-704.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK000032 GGPS2, is adjacent to primer, GGPPS2-F.
The genetic_marker, MK000032 GGPS2, is adjacent to primer, GGPPS2-R.
The genetic_marker, MK000032 GGPS2, is located in gene, DCAR_016697.
The genetic_marker, MK000032 GGPS2, is located in gene, LOC108222283.
The marker_locus, GGPS2, is an instance of genetic_marker, MK000032 GGPS2.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2007 B493×QAL Ver3 B493LG0218.7GGPS2MapViewer
2011 B493×QAL QALLG0525.7GGPS2MapViewer
2016 70349 NG bin mapChr549.84GGPS2MapViewer
2011 B493×QAL B493LG0517.9GGPS2MapViewer
2016 Integ NG bin mapCH518.91GGPS2MapViewer
2016 70349 NG full mapChr549.84GGPS2MapViewer
2002 B493×QAL Ver2 QALLG0292.5GGPS2MapViewer
2002 B493×QAL Ver2 B493LG0295.8GGPS2MapViewer
2016 Integ NG full mapCH519.39GGPS2MapViewer
2007 B493×QAL Ver3 QALLG02130.5GGPS2MapViewer
Synonyms: 
  • MK000032
Sequence Coordinates: 
DCARv2_Chr5:6576192..6577182+
View location in JBrowse: