Resource Type:
Genetic Marker
Name:
MK000048 NCED1
Identifier:
MK000048_NCED1
Organism:
Marker Type:
CAPS
Publication:
- Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
- Brian James Just. Genetic mapping of carotenoid pathway structural genes and major gene QTLs for caroteniod accumulation in wild and domesticated carrot (Daucus Carota L.). Ph.D. Thesis. 2004. University of Wisconsin-Madison
- Grzebelus D, Jagosz B, Simon PW. The DcMaster Transposon Display maps polymorphic insertion sites in the carrot (Daucus carota L.) genome.. Gene. 2007 Apr 01; 390(1-2):67-74.
- Just BJ, Santos CA, Fonseca ME, Boiteux LS, Oloizia BB, Simon PW. Carotenoid biosynthesis structural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2007 Feb; 114(4):693-704.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK000048 NCED1, is adjacent to primer, NCED1-F1. |
| The genetic_marker, MK000048 NCED1, is adjacent to primer, NCED1-R1. |
| The genetic_marker, MK000048 NCED1, is located in gene, DCAR_019639. |
| The genetic_marker, MK000048 NCED1, is located in gene, LOC108220121. |
| The marker_locus, NCED1, is an instance of genetic_marker, MK000048 NCED1. |
MapViewer Marker Map Positions:
| Map Name | Linkage Group | Position | Locus | MapViewer |
|---|---|---|---|---|
| 2004 BJ-Thesis-Fig4.5 | LG01 | 0 | NCED1 | MapViewer |
| 2002 B493×QAL Ver2 B493 | LG02 | 21.9 | NCED1 | MapViewer |
| 2002 B493×QAL Ver2 QAL | LG02 | 16.8 | NCED1 | MapViewer |
| 2007 B493×QAL Ver3 B493 | LG02 | 97.9 | NCED1 | MapViewer |
| 2011 B493×QAL B493 | LG05 | 103.5 | NCED1 | MapViewer |
| 2011 SS1061 | 1061-5 | 3.21 | NCED1 | MapViewer |
| 2011 B493×QAL QAL | LG05 | 101.7 | NCED1 | MapViewer |
| 2011 SS1061QTL | 1061QTL-2 | 3.96 | NCED1 | MapViewer |
| 2007 B493×QAL Ver3 QAL | LG02 | 35.7 | NCED1 | MapViewer |
Synonyms:
- MK000048
Sequence Coordinates:
DCARv2_Chr5:40714307..40715330+
View location in JBrowse: