Resource Type:
Genetic Marker
Name:
MK001045 GSSR-046
Identifier:
MK001045_GSSR_046
Organism:
Marker Type:
SSR
Publication:
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
- Alessandro MS, Galmarini CR, Iorizzo M, Simon PW. Molecular mapping of vernalization requirement and fertility restoration genes in carrot.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2013 Feb; 126(2):415-23.
Cross Reference:
| NCBI Nuccore |  |
|---|
Relationship:
| Relationships |
|---|
| The genetic_marker, MK001045 GSSR-046, is adjacent to primer, GSSR-46-F. |
| The genetic_marker, MK001045 GSSR-046, is adjacent to primer, GSSR-46-R. |
| The genetic_marker, MK001045 GSSR-046, is adjacent to primer, GSSR-46-F. |
| The genetic_marker, MK001045 GSSR-046, is adjacent to primer, GSSR-46-R. |
| The genetic_marker, MK001045 GSSR-046, is adjacent to gene, DCAR_001898. |
| The genetic_marker, MK001045 GSSR-046, is adjacent to gene, LOC108209404. |
| The marker_locus, GSSR-046, is an instance of genetic_marker, MK001045 GSSR-046. |
MapViewer Marker Map Positions:
| Map Name | Linkage Group | Position | Locus | MapViewer |
|---|---|---|---|---|
| 2015 MB Merged | Chr1 | 36.663 | GSSR-046 | MapViewer |
| 2014 J.Parsons Th. HM3 | Chr1 | 44.989 | GSSR-046 | MapViewer |
| 2013 Criolla×Bienal | 1 | 20.8 | GSSR-046 | MapViewer |
| 2015 HM3 | Chr1 | 44.989 | GSSR-046 | MapViewer |
| 2014 J.Parsons Th. Fig_2.4 | Chr1 | 36.663 | GSSR-046 | MapViewer |
| 2014 J.Parsons Th. Fig_3.5 | Chr1 | 36.663 | GSSR-046 | MapViewer |
Synonyms:
- MK001045
Sequence Coordinates:
DCARv2_Chr1:21996548..21997326-
View location in JBrowse:
Sequence:
ACTTTCAGGCTCGCCCCCCGGGCAGATTCATTTATCATCCCTTTTACTTG
CGTTTGATTACTTGACCTGGGTTGAGGAGAAAAGGCACCGCCAGGGCTGG
TCCTAGAATAGTATAAAACCTAAGGCTGTGGATGCAGAGAGCGACACGAT
CTCTCGCGCATTCTCCTCCAACAAGGCCTCTCCCTCTTACATAACTCACC
AACTACTTTACCCGTGTCTACTACATGTATATATATAACTACGACTGACC
CAAACAAAACTACACATCTCTTCAAATCTCCCTCCCTCTCTCTCTCTCTC
CAAACTAAACAACCCCTCCTCTTCAAATCTCTCTCTCTCTCTTCCTATAA
ATCAATTCACGACATGATTCCCAGCAGCGAAGACAATGCAACAGCCACAC
CAACGGCGGTGATCAACAATCTCCGCTTCACATACCCCGGCATCGACGGC
CACCCACCACCCGGTTCAAAGCCACTCATTCAAGATTTCTCTCTGACCCT
CAACCCG
Sequences:
>MK001045_GSSR_046 ID=MK001045_GSSR_046; Name=MK001045 GSSR-046; organism=Daucus carota; type=genetic_marker
ACTTTCAGGCTCGCCCCCCGGGCAGATTCATTTATCATCCCTTTTACTTG
CGTTTGATTACTTGACCTGGGTTGAGGAGAAAAGGCACCGCCAGGGCTGG
TCCTAGAATAGTATAAAACCTAAGGCTGTGGATGCAGAGAGCGACACGAT
CTCTCGCGCATTCTCCTCCAACAAGGCCTCTCCCTCTTACATAACTCACC
AACTACTTTACCCGTGTCTACTACATGTATATATATAACTACGACTGACC
CAAACAAAACTACACATCTCTTCAAATCTCCCTCCCTCTCTCTCTCTCTC
CAAACTAAACAACCCCTCCTCTTCAAATCTCTCTCTCTCTCTTCCTATAA
ATCAATTCACGACATGATTCCCAGCAGCGAAGACAATGCAACAGCCACAC
CAACGGCGGTGATCAACAATCTCCGCTTCACATACCCCGGCATCGACGGC
CACCCACCACCCGGTTCAAAGCCACTCATTCAAGATTTCTCTCTGACCCT
CAACCCG
This is the primary representative sequence for this feature.
Sequence Length:
507