MK001002 GSSR-003

Resource Type: 
Genetic Marker
Name: 
MK001002 GSSR-003
Identifier: 
MK001002_GSSR_003
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
  2. Alessandro MS, Galmarini CR, Iorizzo M, Simon PW. Molecular mapping of vernalization requirement and fertility restoration genes in carrot.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2013 Feb; 126(2):415-23.
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 4 relationships.
Relationships
The genetic_marker, MK001002 GSSR-003, is adjacent to primer, GSSR-3-F.
The genetic_marker, MK001002 GSSR-003, is adjacent to primer, GSSR-3-R.
The genetic_marker, MK001002 GSSR-003, is located in gene, LOC108200927.
The marker_locus, GSSR-003, is an instance of genetic_marker, MK001002 GSSR-003.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 J.Parsons Th. Br1091×HM1F3Chr946.288GSSR-003MapViewer
Synonyms: 
  • MK001002
Sequence Coordinates: 
DCARv2_Chr9:19832157..19832429-
View location in JBrowse: 
DCARv2_Chr9:19832157..19832429-
Sequence: 
CCAAAATCATGGACCCATAAACGCAAACTTCGAGTATTGGATCAAACAAG
AGCCCAACCTGGCCCGACCATCTATCCACTTTCATTCGACTCTTTCTTCT
TGTAAAAAAAAACATATTTAAATACAATTTCAAGCTCCATAGCCCCTGAC
AAACACACATATAAATACAGACACAAACACCATTTTGTGTTTGTGTAGGA
TCATAAAACAAAAGAAAAGAAATGAAGGGGTTGAACGGAGGGACAGTGAG
AGCCAAGGAAGAAGAGGAGCAAGAGGAGGGCATGTCTGCACATTCCCCTT
GCAAGAAATCTCCCTCTTCTTCTTCATCTCTCCACAAGGTCTTTTCTTTA
CTTCTCTTTGCATCTTTATTTATGTTTATATCTGTGCCTCTACATGTTAC
ACAGAGAGAGAGAGTGGAGGAGGGAGGGAGAGAGATACGGAGAGGGAGAT
ATATGGGGGAGAGAGAGAGGGAGAGAGATATGTGAGAGAGAGAGGGGGGA
GAGAGATGTGAGAGAGAGAGTGGGGGAGGGAGATATGTGTGTGAGAGAGA
GGGAGAGAGATGGGGGAGAGAGAGATGTGTGACTGTTTTAAATTTGAGC
Sequences: 
>MK001002_GSSR_003 ID=MK001002_GSSR_003; Name=MK001002 GSSR-003; organism=Daucus carota; type=genetic_marker
CCAAAATCATGGACCCATAAACGCAAACTTCGAGTATTGGATCAAACAAG
AGCCCAACCTGGCCCGACCATCTATCCACTTTCATTCGACTCTTTCTTCT
TGTAAAAAAAAACATATTTAAATACAATTTCAAGCTCCATAGCCCCTGAC
AAACACACATATAAATACAGACACAAACACCATTTTGTGTTTGTGTAGGA
TCATAAAACAAAAGAAAAGAAATGAAGGGGTTGAACGGAGGGACAGTGAG
AGCCAAGGAAGAAGAGGAGCAAGAGGAGGGCATGTCTGCACATTCCCCTT
GCAAGAAATCTCCCTCTTCTTCTTCATCTCTCCACAAGGTCTTTTCTTTA
CTTCTCTTTGCATCTTTATTTATGTTTATATCTGTGCCTCTACATGTTAC
ACAGAGAGAGAGAGTGGAGGAGGGAGGGAGAGAGATACGGAGAGGGAGAT
ATATGGGGGAGAGAGAGAGGGAGAGAGATATGTGAGAGAGAGAGGGGGGA
GAGAGATGTGAGAGAGAGAGTGGGGGAGGGAGATATGTGTGTGAGAGAGA
GGGAGAGAGATGGGGGAGAGAGAGATGTGTGACTGTTTTAAATTTGAGC
This is the primary representative sequence for this feature.
Sequence Length: 
599