Resource Type:
Genetic Marker
Name:
MK001034 GSSR-035
Identifier:
MK001034_GSSR_035
Organism:
Marker Type:
SSR
Publication:
- Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
- Budahn H, Barański R, Grzebelus D, Kiełkowska A, Straka P, Metge K, Linke B, Nothnagel T. Mapping genes governing flower architecture and pollen development in a double mutant population of carrot.. Frontiers in plant science. 2014; 5:504.
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
- Alessandro MS, Galmarini CR, Iorizzo M, Simon PW. Molecular mapping of vernalization requirement and fertility restoration genes in carrot.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2013 Feb; 126(2):415-23.
Cross Reference:
| NCBI Nuccore |  |
|---|
Relationship:
| Relationships |
|---|
| The genetic_marker, MK001034 GSSR-035, is adjacent to primer, GSSR-35-F. |
| The genetic_marker, MK001034 GSSR-035, is adjacent to primer, GSSR-35-R. |
| The genetic_marker, MK001034 GSSR-035, is adjacent to primer, GSSR-35-F. |
| The genetic_marker, MK001034 GSSR-035, is adjacent to primer, GSSR-35-R. |
| The genetic_marker, MK001034 GSSR-035, is located in gene, DCAR_027708. |
| The genetic_marker, MK001034 GSSR-035, is located in gene, LOC108199906. |
| The marker_locus, GSSR-035, is an instance of genetic_marker, MK001034 GSSR-035. |
MapViewer Marker Map Positions:
| Map Name | Linkage Group | Position | Locus | MapViewer |
|---|---|---|---|---|
| 2015 HM3 | Chr8 | 13.892 | GSSR-035 | MapViewer |
| 2013 Criolla×Bienal | 8 | 34.8 | GSSR-035 | MapViewer |
| 2011 B493×QAL QAL | LG08 | 68 | GSSR-035 | MapViewer |
| 2011 SS1061QTL | 1061QTL-5 | 24.36 | GSSR-035 | MapViewer |
| 2014 J.Parsons Th. Fig_2.4 | Chr8 | 41.239 | GSSR-035 | MapViewer |
| 2014 J.Parsons Th. HM3 | Chr8 | 13.892 | GSSR-035 | MapViewer |
| 2014 J.Parsons Th. Fig_3.5 | Chr8 | 41.239 | GSSR-035 | MapViewer |
| 2015 SFF×HM2 | Chr8 | 22.288 | GSSR-035 | MapViewer |
| 2014 J.Parsons Th. SFF×HM2 | Chr8 | 22.288 | GSSR-035 | MapViewer |
| 2011 B493×QAL B493 | LG08 | 96.8 | GSSR-035 | MapViewer |
| 2015 MB Merged | Chr8 | 41.239 | GSSR-035 | MapViewer |
| 2014 yel×cola | LG8 | 24 | GSSR-035 | MapViewer |
| 2011 SS1061 | 1061-4 | 17.935 | GSSR-035 | MapViewer |
Synonyms:
- MK001034
Sequence Coordinates:
DCARv2_Chr8:20303500..20303676-
View location in JBrowse:
Sequence:
TGTTCTCTCTCAACAGGCTCACTAAAATGTTCAACACCGCAGCATACACA
GCTAAAACAAAACATCTAATTCCTTCTCTAATTCACAATCACCGACTCTC
CAGACTAATCAACACGACTAATTACTAATTGATAAATTAATTAAAAGGCA
CAAGAAATTTCAGAGAGAGCAGAGAGAGAGGGAGAGAGAGCGGAGAGAGA
GAGAGAGAGAGAGAGAGAAAGAGAGAGACCAAATGAACAGGAGCTTTGAC
GTGTTTAACGAGCGAAGAAGTGCACTGATTCTCTCTGACCTGGTGCTTGT
GATGCTTTCTTATGTGATTCCGGTA
Sequences:
>MK001034_GSSR_035 ID=MK001034_GSSR_035; Name=MK001034 GSSR-035; organism=Daucus carota; type=genetic_marker
TGTTCTCTCTCAACAGGCTCACTAAAATGTTCAACACCGCAGCATACACA
GCTAAAACAAAACATCTAATTCCTTCTCTAATTCACAATCACCGACTCTC
CAGACTAATCAACACGACTAATTACTAATTGATAAATTAATTAAAAGGCA
CAAGAAATTTCAGAGAGAGCAGAGAGAGAGGGAGAGAGAGCGGAGAGAGA
GAGAGAGAGAGAGAGAGAAAGAGAGAGACCAAATGAACAGGAGCTTTGAC
GTGTTTAACGAGCGAAGAAGTGCACTGATTCTCTCTGACCTGGTGCTTGT
GATGCTTTCTTATGTGATTCCGGTA
This is the primary representative sequence for this feature.
Sequence Length:
325