MK001044 GSSR-045

Resource Type: 
Genetic Marker
Name: 
MK001044 GSSR-045
Identifier: 
MK001044_GSSR_045
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 3 relationships.
Relationships
The genetic_marker, MK001044 GSSR-045, is adjacent to primer, GSSR-45-F.
The genetic_marker, MK001044 GSSR-045, is adjacent to primer, GSSR-45-R.
The marker_locus, GSSR-045, is an instance of genetic_marker, MK001044 GSSR-045.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 J.Parsons Th. Fig_3.5Chr412.05GSSR-045MapViewer
2014 J.Parsons Th. HM3Chr414.699GSSR-045MapViewer
2014 J.Parsons Th. Fig_2.4Chr412.05GSSR-045MapViewer
2011 SS1061QTL1061QTL-570.71GSSR-045MapViewer
2014 J.Parsons Th. SFF×HM2Chr445.009GSSR-045MapViewer
2011 SS10611061-455.471GSSR-045MapViewer
2015 MB MergedChr412.05GSSR-045MapViewer
2015 HM3Chr414.699GSSR-045MapViewer
2015 SFF×HM2Chr445.009GSSR-045MapViewer
Synonyms: 
  • MK001044
Sequence Coordinates: 
DCARv2_Chr4:2738401..2738777+
View location in JBrowse: 
DCARv2_Chr4:2738401..2738777+
Sequence: 
CTTTCCATCCAGGAGGCAACTTTTCTATCACAGCGGCAACTTGGAAAGAT
TTCGTGAGACCCATCTGCTCGGCATGCATCTCATGAATAATCGGTTGCAA
TTCTTGCACCTGACTGTCAACAGTCTTGGAATCCACCATCTTGTAGTCAA
GAAAGCGTCCAACTATCCACTTCTTGGCACCGGCATCTTCGGTTTTATAC
TTACCGTCAAGTGATTCCACTAGAACATTAACTAGATAAGTAAGATCCTA
CTAACTGATATGCCCCTTCCCACTGTGCGGGAAAGTATGAACTCAAGACT
AGCTTAAGGGGAAGTGACGGCTTTGTCATACAATCCTTAAGGTCGTGCGT
CTCAAAGAAACTAGCAGGTGGTGTTGGGGTGAGGACGGTCCATAGTACAC
TCCTCGTAAGCTTACCGGTTCCCATGCCTAAGGTATGAATTTGCTTGCAC
ACACACACACACACAATTAGTTAAGCATATAAATATTAGTTAGTTAAGCA
TATAATATAAGAGGTAGTGGGAGATTTTACATAGCTTGT
Sequences: 
>MK001044_GSSR_045 ID=MK001044_GSSR_045; Name=MK001044 GSSR-045; organism=Daucus carota; type=genetic_marker
CTTTCCATCCAGGAGGCAACTTTTCTATCACAGCGGCAACTTGGAAAGAT
TTCGTGAGACCCATCTGCTCGGCATGCATCTCATGAATAATCGGTTGCAA
TTCTTGCACCTGACTGTCAACAGTCTTGGAATCCACCATCTTGTAGTCAA
GAAAGCGTCCAACTATCCACTTCTTGGCACCGGCATCTTCGGTTTTATAC
TTACCGTCAAGTGATTCCACTAGAACATTAACTAGATAAGTAAGATCCTA
CTAACTGATATGCCCCTTCCCACTGTGCGGGAAAGTATGAACTCAAGACT
AGCTTAAGGGGAAGTGACGGCTTTGTCATACAATCCTTAAGGTCGTGCGT
CTCAAAGAAACTAGCAGGTGGTGTTGGGGTGAGGACGGTCCATAGTACAC
TCCTCGTAAGCTTACCGGTTCCCATGCCTAAGGTATGAATTTGCTTGCAC
ACACACACACACACAATTAGTTAAGCATATAAATATTAGTTAGTTAAGCA
TATAATATAAGAGGTAGTGGGAGATTTTACATAGCTTGT
This is the primary representative sequence for this feature.
Sequence Length: 
539