MK001229 BSSR-072

Resource Type: 
Genetic Marker
Name: 
MK001229 BSSR-072
Identifier: 
MK001229_BSSR_072
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
  2. Ali A, Matthews WC, Cavagnaro PF, Iorizzo M, Roberts PA, Simon PW. Inheritance and mapping of Mj-2, a new source of root-knot nematode (Meloidogyne javanica) resistance in carrot.. The Journal of heredity. 2014; 105(2):288-91.
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 4 relationships.
Relationships
The genetic_marker, MK001229 BSSR-072, is adjacent to primer, BSSR-72-F.
The genetic_marker, MK001229 BSSR-072, is adjacent to primer, BSSR-72-R.
The genetic_marker, MK001229 BSSR-072, is located in gene, LOC108197229.
The marker_locus, BSSR-072, is an instance of genetic_marker, MK001229 BSSR-072.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 Mj-2LG0862.9BSSR-072MapViewer
2011 SS10611061-88.646BSSR-072MapViewer
2011 SS1061QTL1061QTL-416.2BSSR-072MapViewer
Synonyms: 
  • MK001229
Sequence Coordinates: 
DCARv2_Chr8:18417766..18417963+
View location in JBrowse: 
DCARv2_Chr8:18417766..18417963+
Sequence: 
TGTGATAATGATGCTGTAGGCTGCTGTTGGAGGCAACTGGTGGGCTGACG
GTGGCAGTAAGGTGGATGTTGGAGACTGCTAGTGGCTGATGGGGGCAAAA
AGATGGCTCTTGGAGGCTGCTGGTGGGCTGACGAGGCAGGAAGGTGGTTC
TGATACCACTTGATGCAGGCCGGTGTAAGGCAAATTACCAACCTTGACAG
AGAATCAGCGGAGTCACAAATAAATCATAAGATTGTCCAATAATATTAAT
TTATATTCATCTCTATTCCATCATGAATGAATGATTACGAAAGTTTATAC
AGATAAATAATGACTAGGTCGCCAAGTAATTTCCTTAAAAAAGTAAATCT
CTGTGAATAACTACTACCATAATATCTCTTACCTAGCTTCGCCATATTCA
AGTATTTGCTTTCTCATACTCATATTCTGTTTGAGGTACAACATTCATGT
CAGGGGCTTCAGCTGTTTTCGAAACACTGATTTCTTAGTTGCCTTCTATA
ATTTGCTATTTTGCTGGCCTCCCTTATATTTCAACTCGTATTTGCCTTCC
CAACTTTCTCTACTAGAGCTGTACATGCAAGTGCACGATATAGTCAAATG
AGTGTTTCAGAAACAGCTGAGACTTAAACTGACAAAATAAGTCAATTAGA
GATTGTAAGAGACTTGGTTACGAATGATAGACCTCATAGTTACATAGGAG
GTTCTATCTATAAATCAATACATATTTAACATGCCAATTCCTTGGC
Sequences: 
>MK001229_BSSR_072 ID=MK001229_BSSR_072; Name=MK001229 BSSR-072; organism=Daucus carota; type=genetic_marker
TGTGATAATGATGCTGTAGGCTGCTGTTGGAGGCAACTGGTGGGCTGACG
GTGGCAGTAAGGTGGATGTTGGAGACTGCTAGTGGCTGATGGGGGCAAAA
AGATGGCTCTTGGAGGCTGCTGGTGGGCTGACGAGGCAGGAAGGTGGTTC
TGATACCACTTGATGCAGGCCGGTGTAAGGCAAATTACCAACCTTGACAG
AGAATCAGCGGAGTCACAAATAAATCATAAGATTGTCCAATAATATTAAT
TTATATTCATCTCTATTCCATCATGAATGAATGATTACGAAAGTTTATAC
AGATAAATAATGACTAGGTCGCCAAGTAATTTCCTTAAAAAAGTAAATCT
CTGTGAATAACTACTACCATAATATCTCTTACCTAGCTTCGCCATATTCA
AGTATTTGCTTTCTCATACTCATATTCTGTTTGAGGTACAACATTCATGT
CAGGGGCTTCAGCTGTTTTCGAAACACTGATTTCTTAGTTGCCTTCTATA
ATTTGCTATTTTGCTGGCCTCCCTTATATTTCAACTCGTATTTGCCTTCC
CAACTTTCTCTACTAGAGCTGTACATGCAAGTGCACGATATAGTCAAATG
AGTGTTTCAGAAACAGCTGAGACTTAAACTGACAAAATAAGTCAATTAGA
GATTGTAAGAGACTTGGTTACGAATGATAGACCTCATAGTTACATAGGAG
GTTCTATCTATAAATCAATACATATTTAACATGCCAATTCCTTGGC
This is the primary representative sequence for this feature.
Sequence Length: 
746