MEAFSFKPTIGSINTCDAGLLVPSFSTPKKLSFYWKFKKVGIFACKDGGE
VNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDK
ELRYSREVVSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVIL
RKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAV
TSIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDNVKANGKSVLLD
INHEQNSSEEHNVSTSVEDLSVVGDYSQFNDSLAGSQPLQQSDIGSSLKT
DPSVEKSKEQLVNASSSTYKEATLHKPTRLDQSVRPASSALADKKLVRKQ
TKFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGF
VVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSK
DTSKATALYSSLDIQIDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLK
VYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKIT
YFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLE
RIFLSLKEVVPDPLTKTLEAVDHVTQSSESATAEADTEWTEIKKLLKELH
QFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIV
ETSLDKEDVKSAILTCTNRLHS*
Relationships |
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The polypeptide, DCAR_004649, derives from mRNA, DCAR_004649. |
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Match: A0A5J4ZY62 (S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126})
HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 370/772 (47.93%), Postives = 494/772 (63.99%), Query Frame = 0
Query: 21 LVPSFS------TPKKLSFYWKFKKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDK-------------ELRYSR------EVVSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTE--AVTSIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDNV----KANGKSVLLDINHEQNSSEEH----------------NVSTSVEDLSVV----------------GDYSQFNDSLAGSQPLQQSDIGSSLKTDPSVEKSKEQLVNASSSTYKEATLH-KPTRLDQSVRPASS-ALADKKLVRKQTKFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSL----DIQIDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 L+PSFS + LSF K K V +F+ K+ +++ D + K G++L +DPKL L+KI+G+ SN D+S+L IEK Y K +L SR V KKGV E P VKKPS PV VDN G +P+VILR+P ++D G +I+PNL L MGK + KERFSD TL+ K + V S E+ + NS++ + +++V K + + ++N E+ SS++H V++S+E ++ GD +DS G QPL+ SDIG + K+ E S +L ++++ EA L KP RLDQSV+ S D LV ++ ++ L + +SP E EDIDWT AEDLVKTG R+EVELIS+STRGFVVS GSL+GFLPYRNL ++KF AFE+WLR +GL P+MYKQ+L +IG+ + +K ++L SSL D +++ E++ +M+LE+LL IYD EK FL+SF+ +K+K+ V+ ADRKSRRL+FS+K KE+EE +EKKR+LM +L++G+VVKCCI KI YFGIFVEVEGVPA+IHQ+EV+WDA ++P SYFK+GQIVEAKVHQLDFSLERIFLSLKE+ PDPL + LEAV DH + + AEAD EW +++ L+KEL +FEGI SVSKGRFFLSP PTFQVYMASMFENQ+KLLAR+ N+VQEVIV+TSL KE++KSAILTCTNR+ Sbjct: 26 LIPSFSPTRRRRRTRNLSFPRKPKFV-VFSSKEEPKLDRWDQIELKFGQLLGEDPKLTLAKIMGKKSNPDMSHLEIEKSFYTKKGKSTEEVPFGGSEEEQLSNSRNGLNLVRPVPKKGVKFEGKKMPQ---VKKPSQPVGKTVDNTKGGIPNVILRRPTTFNDEDVGTEKSSNLRIKPNLLLRMGKEQTKERFSDITLLKKPQPSCVNSNLDKTQEHSGDAKPKVIEQIEDNSLETEFVLTKATNDVTLLNKPEQRDLDSNVNQEKESSDDHIGLRSDDAFKDNTSFKGVNSSIETVNTTKRKFDESLETQNASPSGDGMLQDDSATGLQPLELSDIGPAEKSTAINELSGTKLEDSNAKLSIEAALQGKPKRLDQSVKGTSKFGREDTVLVIPESYGNAVELENFLATSPIKEHEDIDWTRAEDLVKTGGREEVELISSSTRGFVVSLGSLVGFLPYRNLTARWKFLAFESWLRRQGLSPSMYKQNLGIIGSYEVMNKTSSLESSLVPEMDQKVEGEISPDMKLEDLLRIYDQEKLKFLSSFVGQKIKLMVVLADRKSRRLIFSIKPKEKEELVEKKRSLMARLSVGDVVKCCIKKIMYFGIFVEVEGVPALIHQSEVTWDATLDPASYFKVGQIVEAKVHQLDFSLERIFLSLKEITPDPLGEALEAVIGDHDSLDGKLEAAEADAEWADVESLVKELQRFEGIQSVSKGRFFLSPGLAPTFQVYMASMFENQYKLLARSENRVQEVIVQTSLGKEEMKSAILTCTNRVE 793
Match: A0A2H5PT56 (S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126})
HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 351/744 (47.18%), Postives = 468/744 (62.90%), Query Frame = 0
Query: 33 FYWKFKKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDKELRYSREV-----------------------VSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAVT-SIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDN--------------VKANGKSVLLDINHEQNSSEEHNV--------STSVEDLSVVGDYSQFNDSLAGSQPLQQSDIGSSLKTDPSVEKSKEQLVNASSSTYKEATL-HKPTRLDQSVRPASSALADKKLVRKQTKFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDIQ----IDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV----DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 ++ + K +FA K+ + + D M K GKML +DPKL L+KI+GR N + S L IEK YKN K + EV V KKGV + D+P +KKPS V A+D S+P+VILRKP V DD + + +++PNLSL M +AKE+FSD TL+ + E T +++ K + S A + F + + +++A +N VKAN LD EQ E V ++ED SV+G QP Q + + ++T V S+ LV++S E++L KP RLDQS++ A+ ++ ++ + L +L +SP E E DW AE LVKTG R +VELISASTRGF VSFGSL+GFLPYRNLA K+KF AFETWLR KGLDP+MY+QSL++IGN +K + SS+D++ I+ E++ M+L++LL IYD EK FL SF+ +K+ V V+ ADRK R+L+ SV+ KE+EE +EKKR+LM KL IG++VKCCI KITYFG+FVEVEGVPA+IHQTEVSWDA ++P SYFKIGQ+VEAKVHQLDF+LERIFLSLKE+ PDPLT LE+V D + E+ A+ADTEW +++ L++EL + +GI+SVSKGRFF+SP PTFQVYM+SMFENQ+KLLAR+GNKVQEVIV+ SLDKE +KS IL+CTNR+ Sbjct: 42 YFRQRSKFCVFAAKEEPKFDQWDLMELKFGKMLGEDPKLTLAKIMGRKVNPEASYLEIEKQFYKNKGK-MPEINEVPFDVSDEKKPSSSSSDGLNLVRPVPKKGVKSQDSDRPLEPQIKKPSPSVKRAIDRSKSSIPNVILRKPTMVNADDV-EDMPSRLRMKPNLSLKMKNEQAKEKFSDMTLLRRPEGTTLNVNDDKK---ADISGFAEAKFADDGTGVKTRNAEGENNYVDFTLLEKPSAMTVKAN-----LDEKQEQLGDAETRVKGHDNVLEEPTLEDNSVIG----------MQQPEQIKMMSTEVETSADV-SSERNLVDSSVEIAMESSLPKKPRRLDQSIKEREEAI----VMSSESTLNDIKLNNLHSTSPLQEHEGADWARAESLVKTGERTQVELISASTRGFAVSFGSLVGFLPYRNLATKWKFLAFETWLRGKGLDPSMYRQSLAIIGNRDMQNKTSTPDSSVDLESNQEIEGEISPEMKLDDLLRIYDQEKLKFLLSFVGQKINVNVVMADRKFRKLIVSVRPKEREELVEKKRSLMAKLRIGDIVKCCIKKITYFGVFVEVEGVPALIHQTEVSWDATLDPASYFKIGQVVEAKVHQLDFALERIFLSLKEITPDPLTDALESVVGGRDPLDGRLEA--AQADTEWADVESLIRELQKVDGIESVSKGRFFVSPGLAPTFQVYMSSMFENQYKLLARSGNKVQEVIVQASLDKEAMKSTILSCTNRVE 758
Match: V4TKA9 (S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126})
HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 351/744 (47.18%), Postives = 469/744 (63.04%), Query Frame = 0
Query: 33 FYWKFKKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDKELRYSREV-----------------------VSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAVT-SIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDN--------------VKANGKSVLLDINHEQNSSEEHNV--------STSVEDLSVVGDYSQFNDSLAGSQPLQQSDIGSSLKTDPSVEKSKEQLVNASSSTYKEATL-HKPTRLDQSVRPASSALADKKLVRKQTKFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDIQ----IDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV----DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 ++ + K +FA K+ + + D M K GKML +DPKL L+KI+GR N + S L IEK YKN K + EV V KKGV + D+P +KKPS V A+D S+P+VILRKP V DD + + +++PNLSL M +AKE+FSD TL+ + EA T +++ K + S A + F + + +++A +N VKAN LD EQ E V ++ED SV+G QP Q + + ++T V S+ LV++S E++L KP RLDQS++ A+ ++ ++ + L +L +SP E E DW AE LVKTG R +VELISASTRGF VSFGSL+GFLPYRNLA K+KF AFETWLR KGLDP+MY+QSL++IGN +K + SS+D++ I+ E++ M+L++LL IYD EK FL SF+ +K+ V V+ ADRK R+L+ SV+ KE+EE +EKKR+LM KL IG++VKCCI KITYFG+FVEVEGVPA+IHQTEVSWDA ++P SYFKIGQ+VEAKVHQLDF+LERIFLSLKE+ PDPLT LE+V D + E+ A+ADTEW +++ L++EL + +GI+SVSKGRFF+SP PTFQVYM++MFENQ+KLLAR+GNKVQEVIV+ SLDKE +KS IL+CTNR+ Sbjct: 42 YFPQRSKFCVFAAKEEPKFDQWDLMELKFGKMLGEDPKLTLAKIMGRKVNPEASYLEIEKQFYKNKGK-MPEINEVPFDVSDEKKPSSSSSDGLNLVRPVPKKGVKSQDSDRPLEPQIKKPSPSVRRAIDRSKSSIPNVILRKPTMVNADDV-EDMPSRLRMKPNLSLKMKNEQAKEKFSDMTLLRRPEATTVNVNDDKK---ADISGFAEAKFADDGTGVKTRNAEGENNYVDFTLLEKPSAMTVKAN-----LDEKQEQLGDAETRVKGHDNVLEEPTLEDNSVIG----------MQQPEQIKMMSTEVETSADV-SSERNLVDSSVEIAMESSLPKKPRRLDQSIKEREEAI----VMSSESTLNDIKLNNLHSTSPLQEHEGADWARAESLVKTGERTQVELISASTRGFAVSFGSLVGFLPYRNLATKWKFLAFETWLRGKGLDPSMYRQSLAIIGNRDMQNKTSTPDSSVDLESNQEIEGEISPEMKLDDLLRIYDQEKLKFLLSFVGQKINVNVVMADRKFRKLIVSVRPKEREELVEKKRSLMAKLRIGDIVKCCIKKITYFGVFVEVEGVPALIHQTEVSWDATLDPASYFKIGQVVEAKVHQLDFALERIFLSLKEITPDPLTDALESVVGGRDPLDGRLEA--AQADTEWADVESLIRELQKVDGIESVSKGRFFVSPGLAPTFQVYMSTMFENQYKLLARSGNKVQEVIVQASLDKEAMKSTILSCTNRVE 758
Match: B9RC83 (S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126})
HSP 1 Score: 608.601 bits (1568), Expect = 0.000e+0
Identity = 349/738 (47.29%), Postives = 475/738 (64.36%), Query Frame = 0
Query: 26 STPKKLSFYWKFKKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDK-----ELRYSR----------------EVVSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAVLEDDTGN--NNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAVT------SIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDNVKANGKSVL----LDINHEQNSSEEHNVSTSV---EDLSVVGDYSQFNDSLAGSQPLQQSDIGSSLKTDPSVEKSKEQLVNASSSTYKEATLH-KPTRLDQSVRPA-SSALADKKLVRKQTKFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSK--DTSKATALYSSLDIQIDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 S ++L F K K V A +D +++ D M K G+ML +DPKL L+KI+ R +N D+S L +EK YKN K EL + V K+GV + D+K L + K S P+ +D S+P+VILRKP +EDD + ++ K +IQPNL+L M +A E+FSD TL+ K E V S+D + + + + T + D++K +G ++L ++ SSE V +SV ++L V + F G QPL++S+IG P+ ++S ++LV+ S + TL KP RLDQ V+ +S + L+ ++ ++ L++LP SP +ED DW+ AEDL KTG+R EVEL+SASTRGF+VSFGSL+GFLPYRNL K+KF AFE+WL+ KGLDP+MYKQ+L +IG+ D + ++ ++ +I E+T NM+LE+LL IYD EK FL+SF+ +K+KV V+ AD+ R+L FS++ KE+EES+++KRNLM KL IG+VVKCCI KITYFGIFVEVEGV A+IHQTEVSWDA ++P SYFK+GQIVEAKVHQ+DF+LERIFLSLKE+ PDPL + LE+V D + AEAD+EW +++ L+KEL Q +GI SVSKGRFFLSP PTFQVYMASMFENQ+KLLAR+GNKVQEVIVE SLDKE++KS IL+CT R+ Sbjct: 36 SRRRELWFPRKNKLVVYAAKEDEPKLDQYDQMELKFGRMLGEDPKLTLAKIMARKANPDVSYLEVEKSFYKNKGKIVEIKELPFDVAKDKKSSNSLDGLNLVRPVPKEGVKFQTDEKLKLPEINKLSKPIEKTIDYTKRSIPNVILRKPAMFVEDDVEDKPSSRSKVRIQPNLTLKMRNNQANEKFSDMTLLRKPEPVNVEEKQESLDGAETKISNGATELGT--------------GKEEDDIKYSGFTLLKKPETSVSDVDESSE--TVGSSVPKEQELEVGIKKNSFLFCFEGMQPLEKSNIG------PTDDQSDKKLVDDSVKFSVDTTLQGKPKRLDQYVKETLASTREETTLLHPESYGNADELKNLPPISP---IEDADWSRAEDLFKTGNRGEVELVSASTRGFIVSFGSLVGFLPYRNLVAKWKFLAFESWLKQKGLDPSMYKQNLGIIGSYDVLDKNFDSSADQEINKKIGGEITPNMKLEDLLRIYDQEKLKFLSSFVGQKIKVNVVVADKILRKLTFSLRPKEKEESVQRKRNLMAKLQIGDVVKCCIKKITYFGIFVEVEGVAALIHQTEVSWDATLDPASYFKVGQIVEAKVHQMDFTLERIFLSLKEITPDPLIEALESVVGDRDSMDGRLQAAEADSEWADVESLIKELQQTKGIQSVSKGRFFLSPGLAPTFQVYMASMFENQYKLLARSGNKVQEVIVEASLDKEEMKSTILSCTYRVE 748
Match: A0A6I9TBM6 ((uncharacterized protein LOC105164119 {ECO:0000313|RefSeq:XP_011080993.1}))
HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 366/782 (46.80%), Postives = 485/782 (62.02%), Query Frame = 0
Query: 1 MEAFSFKPTIGSINTCDAGLLVPSFSTPKK---LSF-YWKFKKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDKEL---------------RYSREV--------VSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAVTSIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDNVKANGKSVLLDINH----EQNSSEEH------------NVSTSVEDLSVV----GDYSQFNDSLA-------GSQPLQQSDIGSSLKTDPSVEKSKEQLVNASSSTYKEATLHKPTRLDQSVRPASSALADKKLVRKQTKFD-SAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDIQI----DPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 M+ S T+ + N+ A + FS KK L+F Y K + + +FA KD +++ D M K G+ML +DPK+ L+KI+GR SN D+S L IEKLL K K L + ++ V V KKG N + +KP S K + A SVP+VILRKP + E+D G+ +F ++PNLSL MGK +ERFSD TL+ K E +T E + S + S++ + SA +SD K L+ +N EQ SSEE+ N++ S D V G+ +QF ++ GS Q+D+ S KT S + S+ + + KP RLD+SV+ + ++ + S L +SP E ED DW AE LV+TG R+EVELIS+STRGFVVSFGSLIGFLPYRNLA ++KF AFE+WLR KG++P++Y+Q+L +IGN + S + S +D +I D V S+M+LE+LL IYD EK FL+SF+ +K+KV V+ ADR +R+L+FS+K KE+EE +EKKR+LM +L++G++VKCCI KITYFG+FVEVEGVPA+IHQTEVSWDA ++P SYFK+GQIVEAKVHQLDFSLERIFLSLKE+ PDPL + LEAV D A+ADTEW +++ L+KEL QF+GI SVSKGR+FLSP PTFQVYMASMFENQ+KLLARAGN+VQEVIV+TSL KE++KSAILTCTNR+ Sbjct: 1 MDGLSLSTTL-TANSHSAIQFLQPFSHAKKSRILTFPYRKPRNLLVFASKDDSKLDEWDKMELKFGRMLGEDPKITLAKIMGRKSNPDLSYLEIEKLLDKKKGKALDEEIKEVPFDFSDEKKSTKSVQGLDLVRPVPKKGTNFGMTNKPVESDAKNSKQTIPKATKENKSSVPNVILRKPSSYYENDDGDGKSSRFSMKPNLSLQMGKN-PQERFSDITLLKKPEPMTVSPKSGEENAHSDSK--DGNIGDKSLEYGTVSAGRSDAAALRQKPELMQLNFNKKAEQESSEEYIDPSSGNIANDSNLTISNSDNQVATSTDGNDNQFLETSVTGSGIEKGSATELQADMWSGRKTFASDGPPG----STSAMSMDSVLIEKPKRLDRSVKATDQKVREEVIPTSPKSLGISLELEKFQENSPIKEREDDDWARAEKLVRTGEREEVELISSSTRGFVVSFGSLIGFLPYRNLAARWKFLAFESWLRRKGINPSIYRQNLGIIGNYEAASMMDSSESVVDSEIVGNTDGTVASDMKLEDLLMIYDQEKLKFLSSFVGQKIKVGVVLADRNTRKLIFSIKPKEKEELVEKKRSLMARLSVGDLVKCCIKKITYFGVFVEVEGVPALIHQTEVSWDATLDPASYFKVGQIVEAKVHQLDFSLERIFLSLKEITPDPLIEALEAVVGDQEALDGRLEAAQADTEWADVESLIKELQQFDGIQSVSKGRYFLSPGLAPTFQVYMASMFENQYKLLARAGNRVQEVIVQTSLGKEELKSAILTCTNRVE 774
Match: A0A833UD79 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5460697.1}))
HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 356/746 (47.72%), Postives = 465/746 (62.33%), Query Frame = 0
Query: 36 KFKKVGIFACKDGG--EVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDK-----ELRY--SREV--------------VSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTE--AVTSIDHGKHEYFVNTSA---IATSDFHK---NSIKIDSQSASKSDNVKANGKSVLLDINHEQNSSEEHNVSTSVEDLSVVG-------------DYSQFNDSL--------AGSQPLQQSDIGSSLKTDPSVEKSKEQLVNASSSTYKEATL-HKPTRLDQSV-RPASSALADKKLVRKQTKFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDIQIDP----EVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 K + +FA KDG +++ D M K G +L +DPKL L+KI+GR +N D S L IEK YK K E+ + S+EV V KKG L+ DD+P +KKP+ V A GSVP+VILRKP +D G K +I+PNLSL MG G+AK+ FSD TL+ K E +V + + E + N +A + SD K N + ++ + V AN K V H+ E V + + + G ++ + D GS PL+Q D+ SS + + V++ + EA L KP RLDQSV R S + L+ + ++A DL SP ED DW+ A+DL KTG+R EVELIS+STRGFVVSFGSLIGFLPYRNL K+KF AFE+WLR KGLDP+MY+Q+L IG+ + T L S++D ++D E+ ++M+LE+LL +YD EK FL+SFL +K+KV V+ ADR R+L+FSVK KE+EE ++KKR+LM KL +G+VVKC I KITYFGIFVEVEGVPA+IHQ+EVSWD ++P SYFKIGQIVEAKVH+LDF+L RIFLSLKE+ PDPLT++LE+V D A+A+ EW +I+ L+KEL Q EGI SVSKGRFFLSP PTFQVYMASMFENQ+K+LAR GNKVQEVIV+TSL KE++K+AILTCTN++ Sbjct: 59 KGNRFTVFASKDGDPPKLDQWDQMELKFGHLLGEDPKLTLAKIMGRKANPDASYLEIEKNFYKRKGKLVEIKEVPFDGSKEVQSSSSLDGLNLVRPVPKKGFTLKADDEPP--KIKKPNQAVGKAAGKTKGSVPNVILRKPNLFNNNDAGEKPS-KLRIKPNLSLKMGNGRAKDTFSDMTLLRKPEPVSVNKVTEKRQETYSNVNAKVDSSESDMRKEEANDEFVAFTLLARPEPVNANTKLV---NEHDHFGGAEVEVQDDIGESVLKGLPEPTRTDNATKDNFMEIEDGFFSNEAGQEIGSNPLEQGDMRSSQEVTAFTGLPDKNSVDSRAKLSVEAALLGKPKRLDQSVKRTPKSTRGETVLMNSEAYGNAAEFDDLVAKSPLKGSEDTDWSKAQDLFKTGNRGEVELISSSTRGFVVSFGSLIGFLPYRNLTAKWKFLAFESWLRQKGLDPSMYRQNLGTIGSYDVANMNTPLNSTVDPKVDKSLAGEILADMKLEDLLRVYDQEKIKFLSSFLGQKIKVNVVLADRTFRKLVFSVKPKEKEEDVDKKRSLMAKLQVGDVVKCGIKKITYFGIFVEVEGVPALIHQSEVSWDVTLDPASYFKIGQIVEAKVHELDFALGRIFLSLKEISPDPLTESLESVVGDSNPLDGRLQVAQAEAEWVDIECLIKELQQMEGIHSVSKGRFFLSPGLAPTFQVYMASMFENQYKILARCGNKVQEVIVQTSLGKEEMKAAILTCTNKVE 798
Match: A0A2I4FAV6 ((uncharacterized protein LOC108997112 isoform X2 {ECO:0000313|RefSeq:XP_018828789.2}))
HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0
Identity = 355/740 (47.97%), Postives = 463/740 (62.57%), Query Frame = 0
Query: 42 IFACKDGG--EVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDK-----ELRY--SREV--------------VSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTE--AVTSIDHGKHEYFVNTSA---IATSDFHK---NSIKIDSQSASKSDNVKANGKSVLLDINHEQNSSEEHNVSTSVEDLSVVG-------------DYSQFNDSL--------AGSQPLQQSDIGSSLKTDPSVEKSKEQLVNASSSTYKEATL-HKPTRLDQSV-RPASSALADKKLVRKQTKFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDIQIDP----EVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 +FA KDG +++ D M K G +L +DPKL L+KI+GR +N D S L IEK YK K E+ + S+EV V KKG L+ DD+P +KKP+ V A GSVP+VILRKP +D G K +I+PNLSL MG G+AK+ FSD TL+ K E +V + + E + N +A + SD K N + ++ + V AN K V H+ E V + + + G ++ + D GS PL+Q D+ SS + + V++ + EA L KP RLDQSV R S + L+ + ++A DL SP ED DW+ A+DL KTG+R EVELIS+STRGFVVSFGSLIGFLPYRNL K+KF AFE+WLR KGLDP+MY+Q+L IG+ + T L S++D ++D E+ ++M+LE+LL +YD EK FL+SFL +K+KV V+ ADR R+L+FSVK KE+EE ++KKR+LM KL +G+VVKC I KITYFGIFVEVEGVPA+IHQ+EVSWD ++P SYFKIGQIVEAKVH+LDF+L RIFLSLKE+ PDPLT++LE+V D A+A+ EW +I+ L+KEL Q EGI SVSKGRFFLSP PTFQVYMASMFENQ+K+LAR GNKVQEVIV+TSL KE++K+AILTCTN++ Sbjct: 55 VFASKDGDPPKLDQWDQMELKFGHLLGEDPKLTLAKIMGRKANPDASYLEIEKNFYKRKGKLVEIKEVPFDGSKEVQSSSSLDGLNLVRPVPKKGFTLKADDEPP--KIKKPNQAVGKAAGKTKGSVPNVILRKPNLFNNNDAGEKPS-KLRIKPNLSLKMGNGRAKDTFSDMTLLRKPEPVSVNKVTEKRQETYSNVNAKVDSSESDMRKEEANDEFVAFTLLARPEPVNANTKLV---NEHDHFGGAEVEVQDDIGESVLKGLPEPTRTDNATKDNFMEIEDGFFSNEAGQEIGSNPLEQGDMRSSQEVTAFTGLPDKNSVDSRAKLSVEAALLGKPKRLDQSVKRTPKSTRGETVLMNSEAYGNAAEFDDLVAKSPLKGSEDTDWSKAQDLFKTGNRGEVELISSSTRGFVVSFGSLIGFLPYRNLTAKWKFLAFESWLRQKGLDPSMYRQNLGTIGSYDVANMNTPLNSTVDPKVDKSLAGEILADMKLEDLLRVYDQEKIKFLSSFLGQKIKVNVVLADRTFRKLVFSVKPKEKEEDVDKKRSLMAKLQVGDVVKCGIKKITYFGIFVEVEGVPALIHQSEVSWDVTLDPASYFKIGQIVEAKVHELDFALGRIFLSLKEISPDPLTESLESVVGDSNPLDGRLQVAQAEAEWVDIECLIKELQQMEGIHSVSKGRFFLSPGLAPTFQVYMASMFENQYKILARCGNKVQEVIVQTSLGKEEMKAAILTCTNKVE 788
Match: A0A061G557 ((Nucleic acid-binding, OB-fold-like protein, putative isoform 1 {ECO:0000313|EMBL:EOY24676.1}))
HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 353/749 (47.13%), Postives = 474/749 (63.28%), Query Frame = 0
Query: 23 PSFSTPKKLSFYWKFKKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDK-----ELRYSRE---------------VVSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDN-RIGSVPHVILRKPPAVLEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAV---TSID-----------HGKHEYFVNTSAIATSDFHKNSIKIDSQSASKS-DNVKANGKSVLLDI------NHEQNSSEEHNVSTSVEDLSVVGDYSQFNDSLAGSQPLQQSDIGSSLK--TDPSVEKSKEQLVNASSSTYKEATLHKPTRLDQSVRPASSALADKKLVRKQT-KFDSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDI----QIDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRL 720 PS + PK+ + F+ IFA K+ + + D M K G++L +DPKL L+KI+GR +N + S + IEK +KN K E+ + E V KKG+ + D P++S +K+P+L VD+ + G VP+VILRKP + EDD NL +F+I+PNLSL M KAK+ FS+ TL+ K E + TS+D + E + + SI + + + ++++ G+ + +I N +N+S+E S S+ + +DS++G QP++ S+ S+ + T PS+E A KP RLDQSV+ S++ R QT + DLP SP ED DWT E L+KTG R EVELIS+STRGFVVSFGSLIGFLPYRNLA K+KF AFE+WLR KGLD A YKQ+L VIG+S SK ++L S+ D+ Q + +++ +M LE+LL IYD EK FL+SF+ +++KV V+ ADRK R+L+ S++ K +EE +EKKRN+M KL +G+VVKCCI KITYFGIFVEVEGVPA+IHQTEVSWDA ++P SYFKIGQIVEAKVHQLDF+LER+FLSLKE+ PDPL + L++V D AEAD+EW +++ L+KEL Q EG+ SVSKGRFFLSP PTFQVYMASMFENQ+KLLAR+GNKVQE+IV SLDKE++KS IL+CTNR+ Sbjct: 30 PSRAGPKRGAKRVSFR---IFAAKEEPKFDKWDQMELKFGRLLGEDPKLTLAKIMGRKANPEASYIEIEKAFHKNKGKIVEVEEVPFDVEKKSPTSSSDSLNLVRPVPKKGIKFKADGNPAVSEIKRPTLSDGKTVDSAKKGRVPNVILRKPTLINEDDV--ENLPRFRIKPNLSLKMRNEKAKDHFSEMTLLRKPEPMSVDTSLDKKQDSEGSVGLEKEKEVEDRIGDFTILEKSEQSIHANIREMQELFEDLEIEGQRLEAEIEANMLANATENTSQE---SLEAGHSSIPKKPERKDDSISGMQPVELSNRVSTEESSTGPSIEA---------------ALQGKPKRLDQSVKETSNS------SRAQTVPINPEDYGDLPSVSPQ---EDSDWTRVEHLLKTGERAEVELISSSTRGFVVSFGSLIGFLPYRNLAAKWKFLAFESWLRQKGLDLAAYKQNLGVIGSSDIMSKNSSLVSNSDMENNQQFEGKLSPDMNLEDLLKIYDQEKLKFLSSFVGQRVKVNVLMADRKFRKLIVSLRPKAKEELVEKKRNVMAKLRVGDVVKCCIKKITYFGIFVEVEGVPALIHQTEVSWDATLDPASYFKIGQIVEAKVHQLDFTLERVFLSLKEITPDPLIEALDSVVGDRDNLDGRLQAAEADSEWPDVESLIKELQQIEGVQSVSKGRFFLSPGLAPTFQVYMASMFENQYKLLARSGNKVQEIIVLASLDKEEMKSTILSCTNRV 746
Match: A0A2G9HCX1 (S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126})
HSP 1 Score: 599.356 bits (1544), Expect = 0.000e+0
Identity = 347/766 (45.30%), Postives = 475/766 (62.01%), Query Frame = 0
Query: 9 TIGSINTCDAGLLVPSFSTP-----KKLSFYWKF-KKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDKELRYSRE-----------------------VVSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAV-LEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAVT-SIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDNVKANGKSVLLDIN---HEQNSS----EEHNVSTSVEDLSVV----GDYSQFNDSLAGSQPLQQSDIGSSLKTDPS--VEKSKEQLVNASSSTYKEATL-HKPTRLDQSVRPASSALADKKLVRKQTKF--DSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDIQ----IDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 T S+N+C A + FS P + L+F ++ + + +FA +D + + D M K G+ML +DPK+ L+KI+ R SN D+S L IEKL+ K + L E V KKG E DKP ++ + PV SVP+VILRK P++ ++DD G +F I+PNLSL MGK KERF+D TL+ K E + S + H + A + ++ + S K+D K L+ +N EQ SS ++N+ S D VV D +QF ++ L ++ + L+ D S + S + ++ + L KP RLD+S + A+ ++++ + DS+VL + +SP ED DW AE LVKTG R+ VE+IS+STRGFVVSFG LIGFLPYRNL P++KF AFE+WLR KGLDP+MY+Q+L +IG + + A S +D + D +TS+M LE+LL IYD EK FL+SF+ +K+K ++ ADR SRRL+FSVK +E+E IEK+R+LM +L++G+VVKCCI KITYFG+FVEVEGVPA+IHQTEVSWD ++P SYFK+GQI+EAKVHQLDFS+ERIFLSLKE+ PDPL++ LEAV H + ++ADTEW +++ L+KEL QF+GI SVSKGR+F+SP PTFQVY+ASMFENQ+KLLARAGN+VQEVIV+T L KE++KSAILTCTNR+ Sbjct: 8 TTTSVNSCSA---IQFFSQPCPRKSRILTFPYRIPRNLFVFASRDDPKFDEWDKMELKFGRMLGEDPKITLAKIMSRKSNPDLSYLEIEKLIEKKKGRALDDEIEEIPFDVSDEKKSTKSMEGLNLVRPVPKKGTRFEATDKPVEANAENSIRPVTKDTKETKSSVPNVILRKKPSMFVDDDGGTEKSSRFGIRPNLSLKMGKDPQKERFTDITLLKKPEPMRLSPEENDHSHSSEGEAGVVDEIGDKGLRYGTASDGKTDAPTLLQKPDLMTLNLSEGEQESSLNVATDNNIDISNSDNQVVTATASDLNQFEETTRPDSDLDKNST-TELQADMSGGLTFSSDGASGSTPGISMDTVLTGKPKRLDRSDK-ATDQKNREEVIASNVEILGDSSVLENFLTTSPIKH-EDGDWARAEALVKTGERELVEVISSSTRGFVVSFGPLIGFLPYRNLTPRWKFLAFESWLRRKGLDPSMYRQNLGIIGKYEGATMADPSESVVDSEAGSKTDRPITSDMRLEDLLMIYDQEKLKFLSSFVGQKIKASLVLADRNSRRLIFSVKQREKEALIEKRRSLMERLSVGDVVKCCIKKITYFGVFVEVEGVPALIHQTEVSWDTTLDPASYFKVGQIIEAKVHQLDFSMERIFLSLKEITPDPLSEALEAVVGGHDSLKGGLEASQADTEWADVESLIKELQQFDGIQSVSKGRYFVSPGLAPTFQVYLASMFENQYKLLARAGNRVQEVIVQTELGKEELKSAILTCTNRVE 767
Match: A0A2G9GL84 (S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126})
HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 348/766 (45.43%), Postives = 473/766 (61.75%), Query Frame = 0
Query: 9 TIGSINTCDAGLLVPSFSTP-----KKLSFYWKF-KKVGIFACKDGGEVNGEDGMRFKVGKMLSDDPKLALSKIIGRNSNRDISNLGIEKLLYKNNDKELRYSRE-----------------------VVSKKGVNLEVDDKPSLSSVKKPSLPVLNAVDNRIGSVPHVILRKPPAV-LEDDTGNNNLLKFKIQPNLSLTMGKGKAKERFSDFTLVTKTEAVT-SIDHGKHEYFVNTSAIATSDFHKNSIKIDSQSASKSDNVKANGKSVLLDIN---HEQNSS----EEHNVSTSVEDLSVV----GDYSQFNDSLAGSQPLQQSDIGSSLKTDPS--VEKSKEQLVNASSSTYKEATL-HKPTRLDQSVRPASSALADKKLVRKQTKF--DSAVLRDLPISSPNNELEDIDWTAAEDLVKTGHRDEVELISASTRGFVVSFGSLIGFLPYRNLAPKYKFFAFETWLRYKGLDPAMYKQSLSVIGNSKDTSKATALYSSLDIQ----IDPEVTSNMELEELLTIYDDEKFNFLTSFLDKKLKVYVICADRKSRRLLFSVKAKEQEESIEKKRNLMGKLTIGEVVKCCITKITYFGIFVEVEGVPAMIHQTEVSWDANVNPTSYFKIGQIVEAKVHQLDFSLERIFLSLKEVVPDPLTKTLEAV--DHVTQSSESATAEADTEWTEIKKLLKELHQFEGIDSVSKGRFFLSPDSTPTFQVYMASMFENQFKLLARAGNKVQEVIVETSLDKEDVKSAILTCTNRLH 721 T S+N+C A + FS P + L+F ++ + + +FA +D + + D M K G+ML +DPK+ L+KI+ R SN D+S L IEKL+ K + L E V KKG E DKP ++ + PV SVP+VILRK P++ ++DD G +F I+PNLSL MGK KERF+D TL+ K E + S + H + A + ++ + S KSD K L+ +N EQ SS E+N+ S D +V D +QF ++ L +S + L+ D S + S + ++ + L KP RLD+S + A+ ++++ + S+VL + +SP ED DW AE LVKTG R+ VE+IS+STRGFVVSFG LIGFLPYRNL P++KF AFE+WLR KGLDP+MY+Q+L +IG + + A S +D + D +TS+M LE+LL IYD EK FL+SF+ +K+K ++ ADR SRRL+FSVK +E+E +EK+R+LM +L++G+VVKCCI KITYFG+FVEVEGVPA+IHQTEVSWDA ++P SYFK+GQI+EAKVHQLDFS+ERIFLSLKE+ PDPL + LEAV H + ++ADTEW +++ L+KEL QF GI SVSKGR+F+SP PTFQVY+ASMFENQ+KLLARAGN+VQEVIV+T L KE++KSAILTCTNR+ Sbjct: 8 TTTSVNSCSA---IQFFSQPCPRKSRILTFPYRIPRNLFVFASRDDPKFDEWDKMELKFGRMLGEDPKITLAKIMSRKSNPDLSYLEIEKLIEKKKGRALDDEIEEIPFDVSDEKKSTKSMEGLNLVRPVPKKGTRFEATDKPVEANAENSIRPVTKDTKETKSSVPNVILRKKPSMFVDDDGGTEKSSRFGIRPNLSLKMGKDPQKERFTDITLLKKPEPMRLSPEENDHSHSSEGKAGVVDELGDKGLRYGTASDGKSDAPTILQKPDLMKLNLSEGEQESSLNVATENNIDISNSDNQLVTATASDLNQFEETRRPDSELDESST-TELQADMSGGLTFSSDGASGSTPGISMDTVLTGKPKRLDRSDK-ATDQKNREEVIASNVEILGYSSVLENFLTTSPIKH-EDGDWARAEALVKTGERELVEVISSSTRGFVVSFGPLIGFLPYRNLTPRWKFLAFESWLRRKGLDPSMYRQNLGIIGKYEGATMADTSESVVDSEAGSKTDRSITSDMRLEDLLMIYDQEKLKFLSSFVGQKIKAGLVLADRNSRRLIFSVKQREKEALVEKRRSLMERLSVGDVVKCCIKKITYFGVFVEVEGVPALIHQTEVSWDATLDPASYFKVGQIIEAKVHQLDFSMERIFLSLKEITPDPLLEALEAVVGGHDSLKGGLEASQADTEWADVESLIKELQQFAGIQSVSKGRYFVSPGLAPTFQVYLASMFENQYKLLARAGNRVQEVIVQTELGKEELKSAILTCTNRVE 767
Match Name | Stats | Description |
---|---|---|
A0A5J4ZY62 | E-Value: 0.000e+0, PID: 47.93 | S1 motif domain-containing protein {ECO:0000259|PR... [more] |
A0A2H5PT56 | E-Value: 0.000e+0, PID: 47.18 | S1 motif domain-containing protein {ECO:0000259|PR... [more] |
V4TKA9 | E-Value: 0.000e+0, PID: 47.18 | S1 motif domain-containing protein {ECO:0000259|PR... [more] |
B9RC83 | E-Value: 0.000e+0, PID: 47.29 | S1 motif domain-containing protein {ECO:0000259|PR... [more] |
A0A6I9TBM6 | E-Value: 0.000e+0, PID: 46.80 | (uncharacterized protein LOC105164119 {ECO:0000313... [more] |
A0A833UD79 | E-Value: 0.000e+0, PID: 47.72 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5460... [more] |
A0A2I4FAV6 | E-Value: 0.000e+0, PID: 47.97 | (uncharacterized protein LOC108997112 isoform X2 {... [more] |
A0A061G557 | E-Value: 0.000e+0, PID: 47.13 | (Nucleic acid-binding, OB-fold-like protein, putat... [more] |
A0A2G9HCX1 | E-Value: 0.000e+0, PID: 45.30 | S1 motif domain-containing protein {ECO:0000259|PR... [more] |
A0A2G9GL84 | E-Value: 0.000e+0, PID: 45.43 | S1 motif domain-containing protein {ECO:0000259|PR... [more] |
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An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |