Resource Type:
Polypeptide
Name:
DCAR_008644
Identifier:
DCAR_008644.mRNA-protein
Sequence:
MYPGCRFLDFHPRQMEQMSYAPHHCPGLGYVKMDTARPPVAFPCYACPYP
LPYYGCYHNHNQVPEYPAHHPHYAPPPPVYCHGNYPPLPGNYPFQYLPTQ
HYSVVDPRYEYDKKGPVDHHCCGCPNYLCQQKENKNVKIEEQTFDNDKDR
VVSWVPPEVKDQSYPLLWIPPGYKRSEQGEQTIKPESNSETSLDKEAKEC
LKPRGQEPGVWSGWLPIDLNNLKSLGQVKGDEGTEPQQNEECKSSYPVGF
MPCNPKQDKVEHKDGDQKSIWDPSQYGIFPLKFIENQDKKTMPEGDTEHP
EKFRSEDGPRPGDKNVVKKIIPVKQMDQSEEKGFLKDGQTEENRAPKVEK
NHSEMHLKHTDKKGEKKHLENNSNGQSSHSKTSKLPPVCLRVDPLPSRRT
KSGSSRSPSSPANQKNPDMLSRDNKSSSSSTVQANNQQDVQSSADSDLGR
LQNEKKVKNIEVLDSTESNIKKEACKEDLSQSFADASASDLQEKVSSGSE
EGKGENSDQENYVGVKGVKDVDNLSEDLKKDEELTVEGQSGDVKGETGAT
GGPLDTRESELGSTNGAPCQKFSDAEAAAIIQSAYRGFGVRRWEPLKKLK
EIARIKGELIKVRQDVQNLVSSGSGNVDKQRILIGEAIMNLLLQLDTMQG
LHPSIRNIRKAVAKELVSLQEKLDSITFQHSDELKESDKSEHVEEISERT
GEEDLVKPGEDRHEQETPSPSYVKSGAIELCQDKPHTVMDMNISSVNTGK
SELLLGTDEMGRALEERVQDSSGYVDLKDRQLEPLVEVREPSEAHDVGAK
ELPPLIAVEEKINPPVQLHDPSSLVDSNWSSKEDEEDTKVYTEVSSRVSQ
QNSEAQNFDEGLQIDGGRCIVKPGELKDHDSFQVESKELPPSIIVEEKPN
HVVELQNASPLFDSGWSSKEDEITQVYGEVPLPVRCRLELVEESGLISLD
NEAKETSAEGEPHKKLLAESPNLSDLEGNIATAVCSEGSPKPNNNLSAVG
DLERGKELSGDDMLGADFLDSIALKEKHVSNREAVENVCVVEGDEKSVNN
TLTATGMVDTWEISDVKEVANACQFGREGDDKPVHDRQTADNVRDEAKEM
PGIKEAVNVCEVEGNDKPVDDVQAADIVGIEHWGTGEDNEFEKDVGSVKN
MELIGTCGTEDAVSGEVVHPEETGICNIKQEMEEDENQDMWEDKFDNKEI
CQKHSDGNIFEIPRDEQLLVKELDTEKVNKQPHRECAAGEEDLAGEELVA
ELPQKEVPASLPILGQISSVTETESDKKLAIENEELKEAVEKLIAAGKEQ
LTAISRGKRGGSTPTTSWKIGLAHSDGSLVHVHNSNTLSARTLGANLNKT
HTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSL
RRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLD
LTDQGEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQE
QIEKLLQEKRRGRDINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELES
ERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEF
AKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAA
TPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRY
SLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLII
DRGKDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNV
RVDKYKKSQSTEASKERKQIRAESHDFHPDDVLHSITRNHSVSRNDGKLH
SEKPCTEDSLDHSASSNHPMTITTSKPEISESSSQGLQIMKKHSLKARLL
EAKLESRHSLMKNSKAPIY*
Sequence Length:
1920
Sequence Checksum:
33b98be7caf3228a7906995fde55c6e0
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_008644, derives from mRNA, DCAR_008644. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438JM70 ((Uncharacterized protein {ECO:0000313|EMBL:RVX10032.1}))
HSP 1 Score: 474.167 bits (1219), Expect = 1.686e-145
Identity = 297/660 (45.00%), Postives = 421/660 (63.79%), Query Frame = 0
Match: A0A438JM70 ((Uncharacterized protein {ECO:0000313|EMBL:RVX10032.1}))
HSP 1 Score: 474.167 bits (1219), Expect = 1.686e-145
Identity = 297/660 (45.00%), Postives = 421/660 (63.79%), Query Frame = 0
Query: 1297 GKEQLTAISRGKRGG-STPTTSWKIGLAHSDGSLV---HVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLII-----DRGKDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVN----------------NVRVDKYKKSQSTEASK----ERKQIRAESHDFHPDDVLHSITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTI-------TTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKAPI 1918
GK+ + GKRGG TP+ +W++G + +D + + S ++SAR LGANL + +H+ A MN+ + H + +++ F+L +H+ DPP +QP SA SLRRH+AA+L +HHR V NG ALQPVS AS SSS E A Y AVTP S LD + GE SYN+KTS ELLKVLN IWSLEEQHA+ +SL+K L+ EL+HS+ +I++LLQEK+ R +++ +M+ + D +R+ KEQ + AV SVRDELE ERKLRK+SE+L+ KLA+ELS+VKSSFSN+L EL+RE+KARILLE+LCDEFAKGI +YEQ+ R LKH+P++ +RE D+L+LHISE+WLDERMQMKLA C +K+TIV+KLS EIE+FL++KQ V SR D S + K++ R+SLESFHLN+ SAP++ + EEDS+ S + NK S + NG+ K I +D + S P++ K ++++ K + S + Q ++ T+SC+ N +V ++ +K + EA++ E+K RA + + + VL ++ RNHS K+H E C ED+ + S H I T+ EISESSS+ + +++SLKA+LLEA+LE +H K SK
Sbjct: 19 GKKLKRGVLVGKRGGPCTPSPTWRLGFSLNDATSSIDKDLDCSTSVSARKLGANLWEIQSHLPVANMNRGGGRLRH-HHHKDKGFELPTHLVDPPHSPPDQPESASSLRRHVAASLMQHHRSVERNGRALQPVSPASYSSSMEVAHYNPAVTPTSSLDFKGRIGESSYNLKTSTELLKVLNRIWSLEEQHASTISLVKALKMELDHSRARIKELLQEKQTERQEMDDLMKQVAEDKLIRKTKEQDRIKAAVQSVRDELEDERKLRKRSETLHRKLARELSEVKSSFSNALRELEREKKARILLEDLCDEFAKGIREYEQEVRSLKHKPEKDRVARENSDRLVLHISEAWLDERMQMKLAEARCDVAEKNTIVDKLSFEIETFLRAKQSVTSRRDDYSSPSEQKESRLRRHSLESFHLNEAVSAPQNAEDEEDSSDSDSHCFELNKGSGAKQSNGSCKKHIGNSAEGHAEDTVKSYPTKKKSGSQEITKGRKP-SGLRTQFEEYMARTMSCNGNKTQLVDSEQGEMGGDDSVEINNSQKFEPNEATQESMPEKKNKRAGARGVNLNHVLDNLIRNHSSPLEGEKVHPENNCREDAGNQSVLMGHASPIQQWMSKLTSPDLEISESSSKWPRGSRENSLKAKLLEARLEGQHFRAKASKGSF 676
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6I690 ((Uncharacterized protein {ECO:0000313|EMBL:CCB62486.1}))
HSP 1 Score: 473.011 bits (1216), Expect = 2.367e-145
Identity = 297/660 (45.00%), Postives = 421/660 (63.79%), Query Frame = 0
Match: F6I690 ((Uncharacterized protein {ECO:0000313|EMBL:CCB62486.1}))
HSP 1 Score: 473.011 bits (1216), Expect = 2.367e-145
Identity = 297/660 (45.00%), Postives = 421/660 (63.79%), Query Frame = 0
Query: 1297 GKEQLTAISRGKRGG-STPTTSWKIGLAHSDGSLV---HVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLII-----DRGKDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVN----------------NVRVDKYKKSQSTEASK----ERKQIRAESHDFHPDDVLHSITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTI-------TTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKAPI 1918
GK+ + GKRGG TP+ +W++G + +D + + S ++SAR LGANL + +H+ A MN+ + H + +++ F+L +H+ DPP +QP SA SLRRH+AA+L +HHR V NG ALQPVS AS SSS E A Y AVTP S LD + GE SYN+KTS ELLKVLN IWSLEEQHA+ +SL+K L+ EL+HS+ +I++LLQEK+ R +++ +M+ + D +R+ KEQ + AV SVRDELE ERKLRK+SE+L+ KLA+ELS+VKSSFSN+L EL+RE+KARILLE+LCDEFAKGI +YEQ+ R LKH+P++ +RE D+L+LHISE+WLDERMQMKLA C +K+TIV+KLS EIE+FL++KQ V SR D S + K++ R+SLESFHLN+ SAP++ + EEDS+ S + NK S + NG+ K I +D + S P++ K ++++ K + S + Q ++ T+SC+ N +V ++ +K + EA++ E+K RA + + + VL ++ RNHS K+H E C ED+ + S H I T+ EISESSS+ + +++SLKA+LLEA+LE +H K SK
Sbjct: 2 GKKLKRGVLVGKRGGPCTPSPTWRLGFSLNDATSSIDKDLDCSTSVSARKLGANLWEIQSHLPVANMNRGGGRLRH-HHHKDKGFELPTHLVDPPHSPPDQPESASSLRRHVAASLMQHHRSVERNGRALQPVSPASYSSSMEVAHYNPAVTPTSSLDFKGRIGESSYNLKTSTELLKVLNRIWSLEEQHASTISLVKALKMELDHSRARIKELLQEKQTERQEMDDLMKQVAEDKLIRKTKEQDRIKAAVQSVRDELEDERKLRKRSETLHRKLARELSEVKSSFSNALRELEREKKARILLEDLCDEFAKGIREYEQEVRSLKHKPEKDRVARENSDRLVLHISEAWLDERMQMKLAEARCDVAEKNTIVDKLSFEIETFLRAKQSVTSRRDDYSSPSEQKESRLRRHSLESFHLNEAVSAPQNAEDEEDSSDSDSHCFELNKGSGAKQSNGSCKKHIGNSAEGHAEDTVKSYPTKKKSGSQEITKGRKP-SGLRTQFEEYMARTMSCNGNKTQLVDSEQGEMGGDDSVEINNSQKFEPNEATQESMPEKKNKRAGARGVNLNHVLDNLIRNHSSPLEGEKVHPENNCREDAGNQSVLMGHASPIQQWMSKLTSPDLEISESSSKWPRGSRENSLKAKLLEARLEGQHFRAKASKGSF 659
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZV03 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47241.1}))
HSP 1 Score: 471.47 bits (1212), Expect = 1.050e-144
Identity = 297/646 (45.98%), Postives = 420/646 (65.02%), Query Frame = 0
Match: A0A5B6ZV03 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47241.1}))
HSP 1 Score: 471.47 bits (1212), Expect = 1.050e-144
Identity = 297/646 (45.98%), Postives = 420/646 (65.02%), Query Frame = 0
Query: 1303 AISRGKRGG-STPTTSWKIGLAHSDGSL--------VHVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLIIDRG-----KDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNVRVDKYKKSQS-----TEASKERK----QIRAE-----SHDFHPDDVLHSITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTITTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKAPI 1918
I GKRGG TP +W+IG A DG L + + + TLSAR LGANL + H++AA+MNKA + + +++ F+L S + +PPD+ +QP SAGSL+RHIAA+L +HH+ V NG ALQPVS AS SSS E AP AVTP + LD DQ E ++++K+S ELLKVLN IWSLEEQH +N+SL+K L+REL+HS+ Q+++LLQEK+ R +++++M+ + D +R+ KEQ + AV SVRDELE ER LRK SESL+ KLA+ELS++KSSFSN L+EL+RE+KARILLE+LCDEFA GI DYE++ R L+++ ++ F +E PD+ +LHISE+WLDERMQMKLA + K+TIV+KLS EIE+FL +K+ V R D LSL+K K+ R+S+ESFHLND SAP++ D +EDSTGS L+ N+ S + NG SK D +++ S+ ++ K+++RD K SS Q Q + +SC N ++ ++ + EA+ +K +I E ++ + + VL ++ RNHS+S GKLH TED S T+ PE+SESSS+ + +K+++LKA+LLEA+LE +HS +K SK +
Sbjct: 25 GILVGKRGGPCTPPPTWRIGHAQPDGCLEKNLTFPITNTNTNTTLSARKLGANLWQVLPHLRAAKMNKAGARLRR--HHKDKGFELPSQLVEPPDNPTDQPASAGSLKRHIAASLIQHHQSVERNGCALQPVSPASYSSSMEVAPCNPAVTPTNSLDSKDQIRESTFSLKSSTELLKVLNRIWSLEEQHVSNVSLVKALKRELDHSRSQVKELLQEKQMNRKEMDELMKQVAEDKIVRKNKEQDRIKAAVQSVRDELEDERTLRKHSESLHRKLARELSEMKSSFSNVLKELEREKKARILLEDLCDEFANGIRDYEREVRSLRYKSEKDCFGKENPDRFVLHISEAWLDERMQMKLAESQSNLAGKNTIVDKLSFEIETFLNAKRSVC-RNNDDLSLRKPKERRLRRHSVESFHLNDAVSAPQNVD-DEDSTGSDLHCFELNRGFSAKQSNGGSKQCGDNASEYHLEEIGKSNYTKKKVRSRDNIKACGL-SSLQMQFEEPMARAMSCSGNKTQLVVREQGEVGGENPVEANNSQKFEISEIAPECLLDRTYGLNSNHVLDNLIRNHSLSLEGGKLHP----TEDPGHVSPVQQWMSRFTSPDPEVSESSSKWPRRLKENTLKAKLLEARLEGQHSRLKASKGSL 661
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZBZ5 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8516125.1}))
HSP 1 Score: 458.759 bits (1179), Expect = 6.983e-140
Identity = 295/657 (44.90%), Postives = 413/657 (62.86%), Query Frame = 0
Match: A0A5J4ZBZ5 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8516125.1}))
HSP 1 Score: 458.759 bits (1179), Expect = 6.983e-140
Identity = 295/657 (44.90%), Postives = 413/657 (62.86%), Query Frame = 0
Query: 1303 AISRGKRGG-STPTTSWKIGLAHSDGS----LVHVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEE--EECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLIIDRGK-----DLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNN----------------VRVDKYKKSQSTEASKE----RKQIRAESHDFHPDDVLHSITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTI-------TTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKAPI 1918
I GKRGG TP+ +W++ DG L S LSAR LGANL + H+K +MNK + H + + +L S + +PPD +QP SA L+RHIAA+L +HHR V NG ALQPVS AS SSS E APY A TP S LD + E ++++KTS ELLKVLN IWSLEEQHA+N+SL+K+L+REL+HS+ QI+++L EK+ R +++++M+ + D +R+ KEQ + AV SVRDELE ERKLRK SESL+ KLA+ELS++KSS N L+EL+RE+KARILLE+LCDEFAKGI DYEQ+ R LK++ ++ +E PD+L+LHISE+WLDERMQM++A + +K+TIV+KLS EIE+FLQ+K+ V R D LSL+K K+ + R+SLESFHLN+ ASAP++ D +EDST S + N+ SG + NG SK ++ S+ ++ K+++RD + +SQ + +H VSC+ N V V+ +K + +E ++E K + ++ + + VL ++ R HS+S GKLHS+ C EDS SA H + T PE+SESSS+ +K ++LKA+LLEA+LES+HS K SK +
Sbjct: 25 GILVGKRGGPCTPSPTWRLASVQPDGCVREDLTFPITSAALSARKLGANLWEVLPHLKVVKMNKGGARFRHHHRHHHRDNGLELPSQLVEPPDSPPDQPASASGLKRHIAASLIQHHRSVERNGCALQPVSPASYSSSMEMAPYKPAATPTSSLDFKGRIRESTFSLKTSTELLKVLNRIWSLEEQHASNVSLVKSLKRELDHSRLQIKEILHEKQMDRKEMDELMKQVAEDKIVRKNKEQDRIKAAVQSVRDELEDERKLRKHSESLHRKLARELSEMKSSVPNVLKELEREKKARILLEDLCDEFAKGIRDYEQEVRSLKYKSEKDRVGKENPDRLVLHISEAWLDERMQMRMAESQSNLAEKNTIVDKLSFEIEAFLQAKRSVCLRNNDDLSLRKPKEGNLCRHSLESFHLNEAASAPQNAD-DEDSTSSDSHCFELNRGLSGKQSNGGSKQHGGNASENHLGEIGKSNSTKKKVRSRDNINGRDL-PTSQMKFEEHMAGAVSCNGNKTQLVVGERGVMGGENPVEVNNSQKFEISEVAQECLLDIKNNQVGTYGMNSNHVLDNLIRTHSLSLEGGKLHSKSNCMEDSRGQSAFPGHASPVQQWMSRFTFPDPEVSESSSKWPLRVKDNTLKAKLLEARLESQHSRFKASKGSL 679
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q7U3 ((Uncharacterized protein {ECO:0000313|EMBL:PSS03977.1}))
HSP 1 Score: 439.113 bits (1128), Expect = 2.145e-133
Identity = 285/635 (44.88%), Postives = 397/635 (62.52%), Query Frame = 0
Match: A0A2R6Q7U3 ((Uncharacterized protein {ECO:0000313|EMBL:PSS03977.1}))
HSP 1 Score: 439.113 bits (1128), Expect = 2.145e-133
Identity = 285/635 (44.88%), Postives = 397/635 (62.52%), Query Frame = 0
Query: 1303 AISRGKRGG--STPTTSWKIGLAHSDGSLVHVHN--SNTLSARTLGANLNKTHTHIKAARMNKADSGIAHC--NDEEEECFQLCSHV-ADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQGEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLIIDRGKDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNVR----VDKYKKSQSTEASKERKQIRAESHDFHPDDVLH--SITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTI-------TTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKA 1916
AI GKRG +TP+ +W+ GL DGS+ N ++ SAR LGANL + + AA M++ +D +++ FQ+ + V DPPD E+P SA SLRRH+AA+L +HHR V NGHA QPVS AS SS E APY A+TP+S GE S+N+KTS ELLKVLN IW LEEQH +N+SL+ L+REL+HS+ +I++L QEK+ R ++ ++++ + D +R++KEQ + AV VR+E+E ERKLRK SESL+ KLA+ELS +KSSFS++L+EL+R++KA++LLE+LCDEFAKGI DYEQ+ R LKH+P++ RE PD+LILH+SE+WLDERMQMKL +KSTIV+KLS+EIE+FL++K V S +++GL R+SLESFHLN ASAP + D EEDST S N N+ SSG + NG+SK + + +PS+ K +R+VFK + SQ Q N + + Y+K + ++ +K ++ES + H ++ NHS GKLH+E C +DSL SA H + T E+SE+SS+ +K+H+LKA+LLEA+LE + S K SK
Sbjct: 26 AILVGKRGKNCTTPSPTWRFGL---DGSINENPNFPTSKHSARELGANLWEVLPQLTAATMSRGGGDRQRRRGHDHKDKAFQVPNQVDEDPPDSPHEEPASASSLRRHLAASLIQHHRSVKRNGHARQPVSPASYGSSMEIAPYNPALTPSSSDYKGQIGESSFNLKTSTELLKVLNRIWILEEQHTSNMSLVNALKRELDHSRARIKELAQEKQTSRHEMEELIQQVAADKIVRKSKEQDRIKAAVQLVREEIEDERKLRKHSESLHRKLARELSDLKSSFSSALKELERQKKAQVLLEDLCDEFAKGIRDYEQEVRSLKHKPEKERAHRESPDRLILHLSEAWLDERMQMKLTEPQYDLAEKSTIVDKLSLEIETFLRAKHSVGSVHMNGL----------RRHSLESFHLNGAASAPHNVDDEEDSTSSDSNCFELNRASSGKQSNGSSKHNGESHLKEVKPNPSK-KALSREVFKGQQ---GSQMQ--------FEYGENGAKDPGELTSYQKLEMSKGTKGLGDKKSESVGNGGSNSNHICNLIGNHSSFFEGGKLHAENKCKDDSLARSALPGHASPVQPWKSRFTAPDIEVSETSSRWPHGLKEHTLKAKLLEARLEGQRSHSKASKG 635
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZUJ9 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47238.1}))
HSP 1 Score: 439.113 bits (1128), Expect = 2.732e-133
Identity = 286/646 (44.27%), Postives = 408/646 (63.16%), Query Frame = 0
Match: A0A5B6ZUJ9 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47238.1}))
HSP 1 Score: 439.113 bits (1128), Expect = 2.732e-133
Identity = 286/646 (44.27%), Postives = 408/646 (63.16%), Query Frame = 0
Query: 1303 AISRGKRGG-STPTTSWKIGLAHSDGSL--------VHVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLIIDRG-----KDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNVRVDKYKKSQS-----TEASKERK----QIRAE-----SHDFHPDDVLHSITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTITTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKAPI 1918
I GKRGG TP +W+IG A DG L + + + TLSAR LGANL + H++AA+MNKA + + +++ F+L S + +PPD+ +QP SAGSL+RHIAA+L +HH+ V NG ALQPVS AS SSS E APY AVTP + LD Q E ++++K+S ELLKVLN IWSLEEQH +N+SL+K L+REL+HS+ Q+++LLQEK+ R +++++M+ + D +R+ KEQ + AV SVRDELE ER LRK SESL+ KLA+ELS++KSSFSN L+EL+RE+KARILLE+LCDEFA GI DYE++ R L+++ ++ F +E PD+ +LHISE K+TIV+KLS EIE+FL +K+ V R D LSL+K K++ R+S+ESFHLND SAP++ D +EDSTGS L+ N+ S + NG SK D +++ S+ ++ K+++RD K SS Q Q + +SC N ++ ++ + EA+ +K +I E ++ + + VL ++ RNHS+S GKLH TED S T+ PE+SESSS+ + +K+++LKA+LLEA+LE +HS +K SK +
Sbjct: 25 GILVGKRGGPCTPPPTWRIGHAQPDGCLEKNLTFPITNTNTNTTLSARKLGANLWQVLPHLRAAKMNKAGARLRR--HHKDKGFELPSQLVEPPDNPTDQPASAGSLKRHIAASLIQHHQSVERNGCALQPVSPASYSSSMEVAPYNPAVTPTNSLDFKGQIRESTFSLKSSTELLKVLNRIWSLEEQHVSNVSLVKALKRELDHSRSQVKELLQEKQMNRKEMDELMKQVAEDKIVRKNKEQDRIKAAVQSVRDELEDERTLRKHSESLHRKLARELSEMKSSFSNVLKELEREKKARILLEDLCDEFANGIRDYEREVRSLRYKSEKDCFGKENPDRFVLHISEX-------------------KNTIVDKLSFEIETFLNAKRSVC-RNNDDLSLRKPKESRLRRHSVESFHLNDAVSAPQNVD-DEDSTGSDLHCFELNRGFSAKQSNGGSKQCGDNASEYHLEEIGKSNYTKKKVRSRDNIKACGL-SSLQMQFEEPMARAMSCSGNKTQLVVREQGEVGGENPVEANNSQKFEISEIAPECLLDRTYGLNSNHVLDNLIRNHSLSLEGGKLHP----TEDPGHVSPVQQWMSRFTSPDPEVSESSSKWPRRLKENTLKAKLLEARLEGQHSRLKASKGSL 642
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZRY9 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47240.1}) (Fragment))
HSP 1 Score: 436.417 bits (1121), Expect = 3.150e-133
Identity = 270/564 (47.87%), Postives = 373/564 (66.13%), Query Frame = 0
Match: A0A5B6ZRY9 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47240.1}) (Fragment))
HSP 1 Score: 436.417 bits (1121), Expect = 3.150e-133
Identity = 270/564 (47.87%), Postives = 373/564 (66.13%), Query Frame = 0
Query: 1303 AISRGKRGG-STPTTSWKIGLAHSDGSL--------VHVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHS-SGTRMNGASKLIIDRG-----KDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNVRVDKYKKSQSTEASKERKQIRAESHDFHPDDVLHSITRNHSVSRNDGKL 1849
I GKRGG TP +W+IG A DG L + + + TLSAR LGANL + H++AA+MNKA + + +++ F+L S + +PPD+ +QP SAGSL+RHIAA+L +HH+ V NG ALQPVS AS SSS E AP AVTP + LD DQ E ++++K+S ELLKVLN IWSLEEQH +N+SL+K L+REL+HS+ Q+++LLQEK+ R +++++M+ + D +R+ KEQ + AV SVRDELE ER LRK SESL+ KLA+ELS++KSSFSN L+EL+RE+KARILLE+LCDEFAKGI DYEQ+ R LK++ ++ +E PD+L+LHISESWLDERMQMKLA + +K+TIV+KLS EIE+FLQ+KQ SR D LSL+ K+ R SLESFHLN+ SAP++ D +EDSTGS N N+ SG + NG SK + D +++ + ++ K+++RD K + S + N++ ++ + SQ ++ KQ+ S+ H VL ++ RNHS+S GKL
Sbjct: 25 GILVGKRGGPCTPPPTWRIGHAQPDGCLEKNLTFPITNTNTNTTLSARKLGANLWQVLPHLRAAKMNKAGARLRR-RHHKDKGFELPSQLVEPPDNPTDQPASAGSLKRHIAASLIQHHQSVERNGCALQPVSPASYSSSMEVAPCNPAVTPTNSLDSKDQIRESTFSLKSSTELLKVLNRIWSLEEQHVSNVSLVKALKRELDHSRSQVKELLQEKQMNRKEMDELMKQVAEDKIVRKNKEQDRIKAAVQSVRDELEDERTLRKHSESLHRKLARELSEMKSSFSNVLKELEREKKARILLEDLCDEFAKGIRDYEQEVRSLKYKSEKDRVGKENPDRLVLHISESWLDERMQMKLAESESNLAEKNTIVDKLSFEIEAFLQAKQ---SRNNDDLSLRMPKEG---RQSLESFHLNEAVSAPQNAD-DEDSTGSDSNCFELNRGGLSGKQSNGGSKQLGDNASENNLEEIGKLNSTKKKVRSRDHIKGRDL-SCNGNRNRNQLVVREQGEMGGENPVEVNNSQECLLDRKNKQVGLNSNSNH---VLDNLIRNHSLSLEGGKL 576
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZRT0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47242.1}) (Fragment))
HSP 1 Score: 437.573 bits (1124), Expect = 3.436e-133
Identity = 286/627 (45.61%), Postives = 397/627 (63.32%), Query Frame = 0
Match: A0A5B6ZRT0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47242.1}) (Fragment))
HSP 1 Score: 437.573 bits (1124), Expect = 3.436e-133
Identity = 286/627 (45.61%), Postives = 397/627 (63.32%), Query Frame = 0
Query: 1310 GGSTPTTSWKIGLAHS-----DGSLVHVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHS-SGTRMNGASKLIIDRG-----KDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNVRVDKYKKSQSTEASKERKQIRAESHDFHPDDVLHSITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTI-------TTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKA 1916
GGS + +W++ + D + + TLSAR LGANL + H+ +MNK D+ D+ F+L + QP +A SL+RHIAA+L +HH+ V NG LQPVS AS SSS E APY AVTP S LD + GE ++++KTS ELLKVLN IWSLEEQHA+N+SL+K L+REL+HS+ QI++LLQEK+ R +++++M+ + D +RR KEQ + AV SVRDELE ERKLRK+SESL+ KLA+ELS++KSS SN L+EL+RE++ARILLE+LCDEFAKGI DYEQ+ R LK++ ++ +E PD+L+LHISESWLDERMQMKLA + +K+TIV+KLS EIE+FLQ+KQ SR D LSL+ K+ R SLESFHLN+ SAP++ D +EDSTGS N N+ SG + NG SK + D +++ + ++ K+++RD K + S + N++ ++ + SQ ++ KQ+ S+ H VL ++ RNHS+S GKLH + C EDS SA H + T+ P++SESSS+ K+++LKA+LLEA+LE +HS +K SK
Sbjct: 1 GGSGTSPTWRLAYSAQPADCCDLTFPTAATTTTLSARKLGANLWELLPHLNL-KMNKGDASFHRHKDK---GFELQPPHS-----PPHQPANASSLKRHIAASLIQHHQSVERNGCTLQPVSPASYSSSMEMAPYKPAVTPTSSLDFKGRIGESTFSLKTSTELLKVLNRIWSLEEQHASNISLVKALKRELDHSRVQIKELLQEKQMNRREMDELMKQAAEDKIVRRNKEQDRIKAAVQSVRDELEDERKLRKRSESLHRKLARELSEMKSSLSNVLKELEREKEARILLEDLCDEFAKGIRDYEQEVRSLKYKSEKDRVGKENPDRLVLHISESWLDERMQMKLAESESNLAEKNTIVDKLSFEIEAFLQAKQ---SRNNDDLSLRMPKEG---RQSLESFHLNEAVSAPQNAD-DEDSTGSDSNCFELNRGGLSGKQSNGGSKQLGDNASENNLEEIGKLNSTKKKVRSRDHIKGRDL-SCNGNRNRNQLVVREQGEMGGENPVEVNNSQECLLDRKNKQVGLNSNSNH---VLDNLIRNHSLSLEGGKLHPKSNCMEDSRGQSAFPGHASPVQQWMSRFTSQDPQVSESSSKCPLPFKENTLKAKLLEARLEGQHSRLKASKG 607
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZSD3 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47239.1}) (Fragment))
HSP 1 Score: 437.573 bits (1124), Expect = 4.287e-133
Identity = 289/637 (45.37%), Postives = 405/637 (63.58%), Query Frame = 0
Match: A0A5B6ZSD3 ((Uncharacterized protein {ECO:0000313|EMBL:MPA47239.1}) (Fragment))
HSP 1 Score: 437.573 bits (1124), Expect = 4.287e-133
Identity = 289/637 (45.37%), Postives = 405/637 (63.58%), Query Frame = 0
Query: 1308 KRGGSTPTTSWKIGLAHS-----DGSLVHVHNSNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDEEEECFQLCSHVADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQ-GEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLIIDRG-----KDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNVRVDKYKKSQS-----TEASKERK----QIRAE-----SHDFHPDDVLHSITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTITTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKAPI 1918
KRGGS + +W++ + D + + TLSAR LGANL + H+ +MNK D+ D+ F+L + QP +A SL+RHIAA+L +HH+ V NG LQPVS AS SSS E APY AVTP S LD + GE ++++KTS ELLKVLN IWSLEEQHA+N+SL+K L+REL+HS+ QI++LLQEK+ R +++++M+ + D +RR KEQ + AV SVRDELE ERKLRK+SESL+ KLA+ELS++KSS SN L+EL+RE++ARILLE+LCDEFAKGI DYEQ+ R LK++ ++ +E PD+L+LHISESWLDERMQMKLA + K+TIV+KLS EIE+FL +K+ V R D LSL+K K++ R+S+ESFHLND SAP++ D +EDSTGS L+ N+ S + NG SK D +++ S+ ++ K+++RD K SS Q Q + +SC N ++ ++ + EA+ +K +I E ++ + + VL ++ RNHS+S GKLH TED S T+ PE+SESSS+ + +K+++LKA+LLEA+LE +HS +K SK +
Sbjct: 1 KRGGSGTSPTWRLAYSAQPADCCDLTFPTAATTTTLSARKLGANLWELLPHLNL-KMNKGDASFHRHKDK---GFELQPPHS-----PPHQPANASSLKRHIAASLIQHHQSVERNGCTLQPVSPASYSSSMEMAPYKPAVTPTSSLDFKGRIGESTFSLKTSTELLKVLNRIWSLEEQHASNISLVKALKRELDHSRVQIKELLQEKQMNRREMDELMKQAAEDKIVRRNKEQDRIKAAVQSVRDELEDERKLRKRSESLHRKLARELSEMKSSLSNVLKELEREKEARILLEDLCDEFAKGIRDYEQEVRSLKYKSEKDRVGKENPDRLVLHISESWLDERMQMKLAESQSNLAGKNTIVDKLSFEIETFLNAKRSVC-RNNDDLSLRKPKESRLRRHSVESFHLNDAVSAPQNVD-DEDSTGSDLHCFELNRGFSAKQSNGGSKQCGDNASEYHLEEIGKSNYTKKKVRSRDNIKACGL-SSLQMQFEEPMARAMSCSGNKTQLVVREQGEVGGENPVEANNSQKFEISEIAPECLLDRTYGLNSNHVLDNLIRNHSLSLEGGKLHP----TEDPGHVSPVQQWMSRFTSPDPEVSESSSKWPRRLKENTLKAKLLEARLEGQHSRLKASKGSL 621
BLAST of DCAR_008644 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0FGU6 ((Myosin heavy chain-like protein {ECO:0000313|EMBL:GFY97399.1}))
HSP 1 Score: 434.491 bits (1116), Expect = 8.443e-132
Identity = 283/635 (44.57%), Postives = 394/635 (62.05%), Query Frame = 0
Match: A0A7J0FGU6 ((Myosin heavy chain-like protein {ECO:0000313|EMBL:GFY97399.1}))
HSP 1 Score: 434.491 bits (1116), Expect = 8.443e-132
Identity = 283/635 (44.57%), Postives = 394/635 (62.05%), Query Frame = 0
Query: 1303 AISRGKRGG--STPTTSWKIGLAHSDGSLVHVHN--SNTLSARTLGANLNKTHTHIKAARMNKADSGIAHCNDE--EEECFQLCSHV-ADPPDDTEEQPTSAGSLRRHIAATLFRHHRFVGINGHALQPVSLASPSSSPEAAPYYSAVTPASPLDLTDQGEFSYNVKTSAELLKVLNLIWSLEEQHAANLSLMKTLQRELEHSQEQIEKLLQEKRRGR-DINKIMEHNSLDTPLRRAKEQVPTRNAVLSVRDELESERKLRKQSESLYLKLAQELSQVKSSFSNSLEELKRERKARILLENLCDEFAKGITDYEQKARFLKHRPDEGLFSRERPDQLILHISESWLDERMQMKLAATPCGTTDKSTIVEKLSMEIESFLQSKQPVVSRYVDGLSLKKVKKNSSHRYSLESFHLNDVASAPRDGDCEEDSTGSVLNSLAFNKHSSGTRMNGASKLIIDRGKDLINSDPSRNKIQTRDVFKCNEYHSSSQNQSHKHSFTTVSCDVNNVR----VDKYKKSQSTEASKERKQIRAESHDFHPDDVLH--SITRNHSVSRNDGKLHSEKPCTEDSLDHSASSNHPMTI-------TTSKPEISESSSQGLQIMKKHSLKARLLEAKLESRHSLMKNSKA 1916
AI GKRG +TP+ +W+ GL DGS+ N ++ SAR LGANL + + AA M++ +++ FQ+ S V DPPD E+P SA SLRRH+AA+L +HHR V NGH QPVS AS SS E APY A+TP+S GE S+N+KTS ELLKVLN IW LEEQH +N+SL+ L+REL+HS+ +I++L QEK+ R ++ ++++ + D +R++KEQ + AV VR+E+E ERKLRK SESL+ KLA+ELS +KSSFS++L+EL+R++KA++LLE+LCDEFAKGI DYEQ+ R LKH+P++ RE PD+LILH+SE+WLDERMQMKL +KSTIV+KLS+EIE+FL++K V S +++GL R+SLESFHLN ASAP + D EEDST S N N+ SSG + NG+SK + + +PS+ K +R+VFK + SQ Q N + + Y K + ++ +K ++ES + H ++ NHS GKLH+E C +DSL SA H + T E+SE+SS+ +K+H+LKA+LLEA+LE + S ++ SK
Sbjct: 26 AILVGKRGKNCTTPSPTWRFGL---DGSINENPNFPTSKHSARELGANLWEVLPQLTAATMSRGGGDRHRRRGHDHKDKAFQVPSQVDEDPPDSPHEEPASASSLRRHLAASLIQHHRSVKRNGHTRQPVSPASYGSSMEIAPYNPALTPSSSDYKGQIGESSFNLKTSTELLKVLNRIWILEEQHTSNMSLVNALKRELDHSRARIKELAQEKQTSRHEMEELIQQVAADKIVRKSKEQDRIKAAVQLVREEIEDERKLRKHSESLHRKLARELSDLKSSFSSALKELERQKKAQVLLEDLCDEFAKGIRDYEQEVRSLKHKPEKERAHRESPDRLILHLSEAWLDERMQMKLTEPQYDLAEKSTIVDKLSLEIETFLRAKHSVGSVHMNGL----------RRHSLESFHLNGAASAPHNVDDEEDSTSSDSNCFELNRASSGKQSNGSSKHNGESHLKEVKPNPSK-KALSREVFKGQQ---GSQMQ--------FEYGENGAKDPGELTSYPKLEMSKGTKGLGDEKSESVGNGGSNSNHICNLIGNHSSFFEGGKLHAENKCKDDSLARSALPGHASPVQPWKSRFTAPDIEVSETSSRWPHGLKEHTLKAKLLEARLEGQRSHLRASKG 635
| Match Name | Stats | Description |
|---|---|---|
| A0A438JM70 | E-Value: 1.686e-145, PID: 45.00 | (Uncharacterized protein {ECO:0000313|EMBL:RVX1003... [more] |
| F6I690 | E-Value: 2.367e-145, PID: 45.00 | (Uncharacterized protein {ECO:0000313|EMBL:CCB6248... [more] |
| A0A5B6ZV03 | E-Value: 1.050e-144, PID: 45.98 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4724... [more] |
| A0A5J4ZBZ5 | E-Value: 6.983e-140, PID: 44.90 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8516... [more] |
| A0A2R6Q7U3 | E-Value: 2.145e-133, PID: 44.88 | (Uncharacterized protein {ECO:0000313|EMBL:PSS0397... [more] |
| A0A5B6ZUJ9 | E-Value: 2.732e-133, PID: 44.27 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4723... [more] |
| A0A5B6ZRY9 | E-Value: 3.150e-133, PID: 47.87 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4724... [more] |
| A0A5B6ZRT0 | E-Value: 3.436e-133, PID: 45.61 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4724... [more] |
| A0A5B6ZSD3 | E-Value: 4.287e-133, PID: 45.37 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4723... [more] |
| A0A7J0FGU6 | E-Value: 8.443e-132, PID: 44.57 | (Myosin heavy chain-like protein {ECO:0000313|EMBL... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |