Resource Type:
Polypeptide
Name:
DCAR_028962
Identifier:
DCAR_028962.mRNA-protein
Sequence:
MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGS
YSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVW
RDGRNEMPLMQTTGGTNNMNSRQNLQGQGLSLSLNPQLSSELQISSLHGR
NPDLGGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLG
SSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHER
KKDRVGDCVEADRASIDGTSASPAAGQDSTSNGPNELSASEKHELQNKMA
KLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQ
FRCLRDAINGQIRVTQVSLREQDGSAVGISRLRYVDQQLRQQRALQQLGV
MQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRS
QVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKT
YEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQML
NHGETDMNPPRVSVDECNVYANTMAQPGSENKYLDAYHVPEFGGFGNGNG
VSLTLGLQQREDGSMPVSVGADTNFVMMRREEDYVGFDSTDSENRQHRVG
SSHLWQDFVA*
Sequence Length:
661
Sequence Checksum:
8a01c3652c3c8f19b732331c66593ff2
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_028962, derives from mRNA, DCAR_028962. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B0K9 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 744.962 bits (1922), Expect = 0.000e+0
Identity = 408/684 (59.65%), Postives = 493/684 (72.08%), Query Frame = 0
Match: A0A5J5B0K9 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 744.962 bits (1922), Expect = 0.000e+0
Identity = 408/684 (59.65%), Postives = 493/684 (72.08%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGTNNMNSRQNLQGQGLSLSLNPQLSSELQISSLHGRNPDLGGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASPAAGQDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGS----AVGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMNPPRVS-----VDECNVYANTMAQP-GSENKYLDA---YHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY------VG-----FDSTDSENRQHRVGSSHLWQDFVA 660
MATYFP+ +N+RD+ P+ YLRE L NSYSETPV+ NMMMYMNY +SS SYSD LAGNSQ QN ID+PSVG S QE +SNLG SR D + WRD RN+M M GT ++ QNLQGQGLSLSL Q+ S +Q+ S+ +NP+ G SSFLSP+ +SG+ R+G+FRDD+ QN+Q + P G + KAD+S + M ++ RN+PNSKYLKA QQLLDEVVNV KALKQH+ K+ G E D S + T+ + +STSN P++LSA+EK +LQNKM KLLSMLDEV++RYKQY+HQMQIVVSSFDVI+G GAA+PYT+LALQTISR FRCLRDAI GQIR T+ +L EQD S V ISRLRYVDQQLRQQRALQQLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+LARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE GD EM+ SSS++AP TK D K E +G DLQ +ATS++ E+ QF +S+ H+ D +MV + FQ HGET+ V +DEC ++ +T+A+ G +++ A YH+ EFG FG+GNGVSLTLGLQ E GS+P+SVGA +FV MR ++ Y VG FD DS NRQHR+GSSHL DFVA
Sbjct: 1 MATYFPSPNNQRDATPMLYLRETLPNSYSETPVLSSNMMMYMNYSASSRSYSDALAGNSQQQNGCIDIPSVGNSDSTPPQQEILSNLGGSRIAGHDFNTWRD-RNDMLFMHPMAGTTSI---QNLQGQGLSLSLGTQMPSGIQMPSVQYQNPNPGFSSFLSPNPPISGEGNGRNGSFRDDDNSQNKQS-----MPPSFPGGNPDSTKADISPYGMSSMARNIPNSKYLKAVQQLLDEVVNVWKALKQHDSKELMKG-SKEIDGGSKNETTLPSSNPHESTSNSPSDLSAAEKQDLQNKMTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAQPYTALALQTISRHFRCLRDAITGQIRSTRRNLGEQDASENSKGVAISRLRYVDQQLRQQRALQQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEETGDVEMDSNSSSEVAPKATKGDIKASEDKGEDLQQSATSTATEQCSTGQFFDSKSNHITDAEMVGLNADARFQNGTHGETETEYGVVKSRMEQIDECGLFQDTIARSNGGSERFMAAAAPYHMSEFGRFGSGNGVSLTLGLQHCEGGSLPLSVGAHHSFVAMRGDDVYNTATSSVGPETADFDCMDSGNRQHRLGSSHLLHDFVA 674
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZTS5 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46948.1}))
HSP 1 Score: 713.761 bits (1841), Expect = 0.000e+0
Identity = 402/690 (58.26%), Postives = 485/690 (70.29%), Query Frame = 0
Match: A0A5B6ZTS5 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46948.1}))
HSP 1 Score: 713.761 bits (1841), Expect = 0.000e+0
Identity = 402/690 (58.26%), Postives = 485/690 (70.29%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGTNNMNSRQNLQGQGL-SLSLNPQLSSELQISSLHGRNPDL------GGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASPAAG-----QDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGSA----VGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMN--------PPRVSVDECNVYANTMAQP-GSENKYLDA---YHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY------VG-----FDSTDSENRQHRVGS 651
MATYFP+S+N+RD+ P+ Y RE L NSY ETPV+ GNMMMYMNY +SS SYSDTLA NSQ QN+ ID+PSVG S QE SNLG SR E D + WRD RNEM M GGT ++ SLSL Q+SS +Q+ S+ RNP+ G SSFLSP+ ++SG+ R+G+FRDD+ QN+Q + P G + L+KAD+S + M +I R +PNSKYLKAAQ+LLDEVVNV KALKQH+ K+ G E D S + T+ A G +STSN P++LSA+EK +LQNKM KLLSMLDEV++RYKQY+H MQIVVSSFDVI+GSGAA+PYT+LALQTISR FRCLRDAI GQIR+T+ SL EQD SA VGISRLRYVDQQLRQQRALQQLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+LARQTGL+RSQVSNWFINARVRLWKPMVEEMYKEE GD EM+ SSS++AP K D K E +G DLQ + TS + E+ QF +S+ HVPD +M+ + FQ HGET+ R +VD+C ++ +TM + G +++ A YH+ EFG FG+GNGVSLTLGLQ E GS+P+SVGA +F+ MR E Y VG FD DS NRQHR+GS
Sbjct: 1 MATYFPSSNNQRDATPLLYFRETLPNSYPETPVLSGNMMMYMNYSASSRSYSDTLAANSQQQNSCIDIPSVGPSDSTPPQQEIFSNLGGSRIPEHDFNTWRD-RNEMLFMHPMGGTTSILQGGQNLQGQGLSLSLGTQMSSGIQMPSIQYRNPNPNPNPNPGFSSFLSPNPSISGEGNGRNGSFRDDDNSQNKQS-----MPPGFPGGNPDLIKADISPYGMSSISRTIPNSKYLKAAQKLLDEVVNVRKALKQHDSKEPMKG-SKEVDGGSKNETTLPSATGVSSNPPESTSNSPSDLSAAEKQDLQNKMTKLLSMLDEVDRRYKQYYHHMQIVVSSFDVIAGSGAAQPYTALALQTISRHFRCLRDAITGQIRLTRRSLGEQDVSANSKGVGISRLRYVDQQLRQQRALQQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLSRSQVSNWFINARVRLWKPMVEEMYKEEIGDIEMDSNSSSEVAPKAMKGDIKASEDKGEDLQQSVTSMATERCSTGQFFDSKSDHVPDAEMLGPNADARFQNGTHGETETEYGVVKSRMEQRSNVDDCGLFQDTMVRSNGGSERFMAAAATYHMSEFGRFGSGNGVSLTLGLQHCEGGSLPLSVGAHHSFITMREENVYNAATSSVGPETADFDCMDSGNRQHRLGS 683
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2MZM0 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0
Identity = 386/673 (57.36%), Postives = 470/673 (69.84%), Query Frame = 0
Match: A0A7N2MZM0 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0
Identity = 386/673 (57.36%), Postives = 470/673 (69.84%), Query Frame = 0
Query: 19 YLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGTNN-MNSRQNLQGQGLSLSLNPQLSSELQISSLHGRNPDLGGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRV--GDCVEADRASIDGTSASPAA----GQDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGSA----VGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETD--------MNPPRVSVDECNVYANTMAQ--PGSENKYLDAYHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY------VGFDSTDSE-----NRQHRVGSSHLWQDFV 659
YLRE L +SY+E PVIPGNMMMYMN SG YSD LAGNSQ QN +++PS+GA +S QE MSNLG S E D + WR+ RNEM + GG + ++S QNLQGQGLSLSL Q+ S +Q+SS+ RNP+ G +SFLSP++++SGD DR+G+ RD+ Q RN EY+ P G + L K D S + M +I+RNVPNSKYLK AQQLLDEVVNV KALKQ + K + + E+D S + + P+ Q+S N P ELS +EK +LQNK+ KLLSM DEV++RYKQY+HQMQIVVSSFDVI+G GAAKPYT+LALQTISR FRCLRDAI GQIR T+ SL EQD S VGI+RLRYVDQ L+QQRALQQLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+LARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE GD EM+ SSS+ A TK D +T E RG DLQ +A+S++ E+ Q +S+ HVPDV+M S +F + GE + R +VD+C+++ + M Q SE AYH+ E G FG+G+GVSLTLGLQ EDGS+P+S G +F+ MR +E Y VG ++ D E N+QHR SSHL DFV
Sbjct: 3 YLREHLPSSYAEAPVIPGNMMMYMN----SGPYSDALAGNSQQQNNCMEIPSLGASNSTPQQQEIMSNLGGSHIAEHDFNAWREARNEMLVTHPMGGAASILHSGQNLQGQGLSLSLGTQMPSGIQMSSIPYRNPNPGFASFLSPNSSISGDSADRNGSSRDE------QLRNAEYLPPGFPGGNQDLNKGDSSPYGMPSIVRNVPNSKYLKVAQQLLDEVVNVRKALKQADMKNESTHEKNSKESDGGSKNENALPPSGVSSNPQESAGNTPCELSHAEKQDLQNKLTKLLSMSDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAITGQIRATRKSLGEQDTSGSSRGVGITRLRYVDQHLKQQRALQQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEETGDMEMDSNSSSENAVKATKGDNRTSEERGEDLQQSASSTATERCSTGQLMDSKSNHVPDVEMAGSSV-VNFHNGSRGEAENEYGLVKRREEQRPNVDDCSLFPDAMMQSDAASERFMAAAYHMSELGRFGSGSGVSLTLGLQHCEDGSLPMSSGNHHSFMSMRGDEIYSAAASSVGPETADFECMNPGNQQHRFSSSHLLHDFV 664
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZSL1 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46945.1}))
HSP 1 Score: 711.064 bits (1834), Expect = 0.000e+0
Identity = 409/698 (58.60%), Postives = 488/698 (69.91%), Query Frame = 0
Match: A0A5B6ZSL1 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46945.1}))
HSP 1 Score: 711.064 bits (1834), Expect = 0.000e+0
Identity = 409/698 (58.60%), Postives = 488/698 (69.91%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGTNNMNSRQNLQGQGL-SLSLNPQLSSELQISSLHGRNPDL------GGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASPAAG-----QDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGSA----VGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMN--------PPRVSVDECNVYANTMAQPGSEN--KYLDAYHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY-------VG-----FDSTDSENRQHRVGSSHLWQDFVA 660
MATYFP+S+N+RD+ P+ Y RE L NSY ETPV+ GNMMMYMNY +SS SYSDTLA NSQ QN+ ID+PSVG S QE SNLG SR E D + WRD RNEM M GGT ++ SLSL Q+SS +Q+ S+ RNP+ G S FLSP+ ++SG+ R+G+FRDD+ QN+Q + P G + L+KAD+S + M +I R +PNSKYLKAAQ+LLDEVVNV KALKQH+ K+ G E D S + T+ A G +STSN P++LSA+EK +LQNKM KLLSMLDEV++RYKQY+H MQIVVSSFDVI+GSGAA+PYT+LALQTISR FRCLRDAI GQIR+T+ SL EQD SA VGISRLRYVDQQLRQQRALQQLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+LARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE GDAEM+ SSS++A TK D E +G DL +ATS++ E QF +S+ +VP+ +MV +SFQ HGET+ R SVD+C+++ + GSE+ AYHV E G FG+GNGVSLTLGLQ E G +P+SVGA +FV MR ++ Y VG FD DS NRQHR GSSHL DFVA
Sbjct: 1 MATYFPSSNNQRDATPLLYFRETLPNSYPETPVLSGNMMMYMNYSASSRSYSDTLAANSQQQNSCIDIPSVGPSDSTPPQQEIFSNLGGSRIPEHDFNTWRD-RNEMLFMHPMGGTTSILQGGQNLQGQGLSLSLGTQMSSGIQMPSIQYRNPNPNPNPNPGVSWFLSPNPSISGEGNGRNGSFRDDDNSQNKQS-----MPPGFPGGNPDLIKADISPYGMSSISRTIPNSKYLKAAQKLLDEVVNVRKALKQHDSKEPMKG-SKEVDGRSKNETTLPSATGVSSNPPESTSNSPSDLSAAEKQDLQNKMTKLLSMLDEVDRRYKQYYHHMQIVVSSFDVIAGSGAAQPYTALALQTISRHFRCLRDAITGQIRLTRRSLGEQDVSANSKGVGISRLRYVDQQLRQQRALQQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGDAEMDSNSSSEVALKATKGDINASEDKGEDLLQSATSAATELCSTGQFLDSKSNYVPEAEMVGPNDDASFQNGIHGETETEYGVVKSRVEQRSSVDDCSLF---QSNGGSESFMAAAAAYHVSELGRFGSGNGVSLTLGLQHCEGGGLPLSVGAHHSFVTMRGDDVYNAAASSSVGPETADFDCLDSGNRQHRFGSSHLLHDFVA 688
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZTX5 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46946.1}))
HSP 1 Score: 708.368 bits (1827), Expect = 0.000e+0
Identity = 399/690 (57.83%), Postives = 482/690 (69.86%), Query Frame = 0
Match: A0A5B6ZTX5 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46946.1}))
HSP 1 Score: 708.368 bits (1827), Expect = 0.000e+0
Identity = 399/690 (57.83%), Postives = 482/690 (69.86%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGTNNMNSRQNLQGQGL-SLSLNPQLSSELQISSLHGRNPDL------GGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASPAAG-----QDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGS----AVGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMN--------PPRVSVDECNVYANTMAQP-GSENKYLDA---YHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY------VG-----FDSTDSENRQHRVGS 651
MATYFP+S+N+RD+ P+ Y RE L NSY ETPV+ GNMMMYMNY +SS SYSDTLA NSQ QN+ ID+PSVG S QE SNLG SR E D + WRD RNEM M GGT ++ SLSL Q+SS +Q+ S+ RNP+ G S FLSP+ ++SG+ R+G+FRDD+ Q++Q +LP G +S +K D+S + + +I R +P SKYLKAAQQLLDEVVNV KALKQ K+ G E D S + T+ PA+G Q+STSN P+ELSA+EK +LQNKM KLLSMLDEV++RYKQY+HQMQIVVSSFDV++G AAKPYT+LALQTISR FRCLRDAI GQI+VT+ SL EQD S VGISRLRYVDQQLRQQRALQQLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+LARQTGL+RSQVSNWFINARVRLWKPMVEEMYKEE GD EM+ SSS++AP K D K E +G DLQ + TS + E+ QF +S+ HVPD +M+ + FQ HGET+ R +VD+C ++ +TM + G +++ A YH+ EFG FG+GNGVSLTLGLQ E GS+P+SVGA +F+ MR E Y VG FD DS NRQHR+GS
Sbjct: 1 MATYFPSSNNQRDATPLLYFRETLPNSYPETPVLSGNMMMYMNYSASSRSYSDTLAANSQQQNSCIDIPSVGPSDSTPPQQEIFSNLGGSRIPEHDFNTWRD-RNEMLFMHPMGGTTSILQGGQNLQGQGLSLSLGTQMSSGIQMPSIQYRNPNPNPNPNPGVSWFLSPNPSISGEGSGRNGSFRDDDNSQSKQS-----MLPGFPGGNSDSIKPDISPYGISSIARTIPGSKYLKAAQQLLDEVVNVRKALKQCNSKELMKGS-KEVDGGSKNDTTLPPASGVSSNPQESTSNSPSELSAAEKQDLQNKMTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVVAGCSAAKPYTALALQTISRHFRCLRDAITGQIQVTRRSLGEQDASENSKGVGISRLRYVDQQLRQQRALQQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLSRSQVSNWFINARVRLWKPMVEEMYKEEIGDIEMDSNSSSEVAPKAMKGDIKASEDKGEDLQQSVTSMATERCSTGQFFDSKSDHVPDAEMLGPNADARFQNGTHGETETEYGVVKSRMEQRSNVDDCGLFQDTMVRSNGGSERFMAAAATYHMSEFGRFGSGNGVSLTLGLQHCEGGSLPLSVGAHHSFITMREENVYNAATSSVGPETADFDCMDSGNRQHRLGS 683
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZQW3 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46947.1}))
HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0
Identity = 407/699 (58.23%), Postives = 487/699 (69.67%), Query Frame = 0
Match: A0A5B6ZQW3 ((Putative BEL1-like homeodomain protein 3 {ECO:0000313|EMBL:MPA46947.1}))
HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0
Identity = 407/699 (58.23%), Postives = 487/699 (69.67%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGTNNMNSRQNLQGQGL-SLSLNPQLSSELQISSLHGRNPDL------GGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASPAAG-----QDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGSA----VGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMN--------PPRVSVDECNVYANTMAQPGSEN--KYLDAYHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY-------VG-----FDSTDSENRQHRVG-SSHLWQDFVA 660
MATYFP+S+N+RD+ P+ Y RE L NSY ETPV+ GNMMMYMNY +SS SYSDTLA NSQ QN+ ID+PSVG S QE SNLG SR E D + WRD RNEM M GGT ++ SLSL Q+SS +Q+ + RNP+ G S FLSP+ ++SG+ R+G+FRDD+ QN+Q + P G + L+KAD+S + M +I R +PNSKYLKAAQ+LLDEVVNV KALKQH+ K+ G E D S + T+ A G +STSN P++LSA+EK +LQNKM KLLSMLDEV++RYKQY+H MQIVVSSFDVI+GSGAA+PYT+LALQTISR FRCLRDAI GQIR+T+ SL EQD SA VGISRLRYVDQQLRQQRALQQLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+L+RQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE GDAEM+ SSS++A TK D E +G DL +ATS++ E QF +S+ +VP+ +MV +SFQ HGET+ R SVD+C+++ + GSE+ AYHV E G FG+GNGVSLTLGLQ E G +P+SVGA +FV MR ++ Y VG FD DS NRQHR G SSHL DFVA
Sbjct: 1 MATYFPSSNNQRDATPLLYFRETLPNSYPETPVLSGNMMMYMNYSASSRSYSDTLAANSQQQNSCIDIPSVGPSDSTPPQQEIFSNLGGSRIPEHDFNTWRD-RNEMLFMHPMGGTTSILQGGQNLQGQGLSLSLGTQMSSGIQMPPIQYRNPNPNPNPNPGVSWFLSPNPSISGEGNGRNGSFRDDDNSQNKQS-----MPPGFPGGNPDLIKADISPYGMSSISRTIPNSKYLKAAQKLLDEVVNVRKALKQHDSKEPMKG-SKEVDGGSKNETTLPSATGVSSNPPESTSNSPSDLSAAEKQDLQNKMTKLLSMLDEVDRRYKQYYHHMQIVVSSFDVIAGSGAAQPYTALALQTISRHFRCLRDAITGQIRLTRRSLGEQDVSANSKGVGISRLRYVDQQLRQQRALQQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLSRQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGDAEMDSNSSSEVALKATKGDINASEDKGEDLLQSATSAATELCSTGQFLDSKSNYVPEAEMVGPNDDASFQNGIHGETETEYGVVKSRVEQRSSVDDCSLF---QSNGGSESFMAAAAAYHVSELGRFGSGNGVSLTLGLQHCEGGGLPLSVGAHHSFVTMRGDDVYNAAASSSVGPETADFDCLDSGNRQHRFGSSSHLLHDFVA 689
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A835DMD0 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8405289.1}))
HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0
Identity = 389/757 (51.39%), Postives = 482/757 (63.67%), Query Frame = 0
Match: A0A835DMD0 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8405289.1}))
HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0
Identity = 389/757 (51.39%), Postives = 482/757 (63.67%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGT-------------------------------------NNMNSRQNLQGQGLSLSLNPQLSSELQISSLHGRNPDLGGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLK-----------------ADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHE---------------RKKDRVGDCVEADRASIDGTSASPAAGQDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGSA----VGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMN--------PPRVSVDECNVYANTMAQ--PGSENKYL---DAYHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY------VG-----FDSTDSENRQHRVGSSHLWQDFVA 660
MATY+P+SSN+RD +P+ YLR+ + SY E P +PGN MMY+NY +Y+DTLAGNSQ QN +++PSVGA S S Q +SNL S GE D VWRDGRNEM MQ TGG +N+ R NLQGQGLSLSL+ Q+ S + I SL R+P+ G SSFLS H ++SG+ +R G+ R DE+ ++Q R+ EY+ P G + +K +D S ++M + +PNSKY+KAAQQLLDEVVNV KALKQ + R+ D +C +A + T+ P+ Q+S +N ELS +E+ +LQNKM KLLSMLDEV++RYKQY+HQMQIVVSSFDVI+G GAAKPYT+LALQTISR FRCLRDAINGQI+ T+ SL EQD SA GISRLRYVDQQL+QQRALQQLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+LARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE GDAEM+ SSS+ AP T KDD + + RG DLQ TS++ E+ + Q +S +PDV+M +SF H E D + R + D+CN++ + + Q +++ AY + E G FG+GNGVSLTLGLQ + G +P+S G NFV MR +E Y VG +D D NRQHR +SHL DFVA
Sbjct: 1 MATYYPSSSNQRDIMPMLYLRDAVPTSYPEAPGLPGNTMMYLNY-----AYTDTLAGNSQPQNNCVEIPSVGASQSTPSQQRILSNLSGSNLGEQDYGVWRDGRNEMLFMQPTGGAASMQSIEGQLSSDLVRNSVTEDHQMAMRTQLGILQGGHNLQGRHNLQGQGLSLSLSTQIPSAIPIPSLQYRHPNPGLSSFLSSHQSMSGEGGNRTGSCRGDESSPSKQSRHAEYLPPGFPGGNHDAIKGEAMSNLQCSIGPRQMHSDQSPYSMSGLASTIPNSKYIKAAQQLLDEVVNVRKALKQPDSDKHQSFHGFGLKGSRETDGGSNCDDA----LPPTNGMPSNPQESATNSSGELSPAERQDLQNKMTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAINGQIQATRRSLGEQDTSANSKGGGISRLRYVDQQLKQQRALQQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGDAEMDSNSSSENAPKTVKDDIRASKDRGEDLQQNVTSAATERCHLGQLLDSESDLIPDVEMTGPTAGASFHNGAHVEDDTDYGEMRLRGEQRPNEDDCNLFQDALLQSGGSGGGRFMAAAAAYQMSELGRFGSGNGVSLTLGLQHCDGGGLPMSGGTHHNFVTMRGDEMYNAAAPSVGPDTADYDCMDPGNRQHRFSTSHLLHDFVA 748
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4DZE1 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0
Identity = 389/692 (56.21%), Postives = 473/692 (68.35%), Query Frame = 0
Match: A0A4S4DZE1 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0
Identity = 389/692 (56.21%), Postives = 473/692 (68.35%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMN-YPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTG-GTNNMNSRQNLQGQGLSLSLNPQLSSELQISSLHGRNPDLGGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASPAAG-----QDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGSA----VGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTK-DDTKTYEARGADLQNTATSSSNEK-SMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMN----PPRVSVDECNVYANTMAQP-GSENKYL-DAYHVPEFGGFGNGNGVSLTLGLQQRE-DGSMPVSVGADTN-FVMMRREEDY-----------VGFDSTDSENRQHRVGSSHLWQDFVA 660
MAT+FPNS+++R + P+ YLRE L +SYSE+PVIP NMMMY+N Y SSSG +DTLAGNS D+P A S HQE +SNLG SR GE D + W +GR EMP M G + QNLQGQGLSLSL+ Q+ S Q+ S+ R P+ G SSFL+P ++SG+ LG +S +K D+S++ M ++ R +PNSKYLKAAQQLLDEVVNV ALKQ + KK + E D + P+ G QDS SN P+ELSA+EK +LQNK+ KLLSMLDEV++RYKQY+HQMQIVVSSFDVI+G GAAKPYT+LALQTISR FRCLRD I GQIRV++ SL EQD SA VGISRLRYVDQ LRQQRALQQLG+MQQH WRPQRGLPESSVS+LRAWLFEHFLHPYPKDS+KI+LARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEM+ SSS++AP DD E RG DLQ+ ATS++ E+ S +QF +S+ HVPD++M+ + + ++FQ HG T++ R SVDE +V+ +T+ + G +Y+ AYH E G FGNG GVSLTLGLQ E G +P+SV + + FV +R +E Y FD+ DS NRQHR SSHL DFVA
Sbjct: 1 MATFFPNSNDQRYAAPMLYLRESLPSSYSESPVIPSNMMMYVNNYSSSSGPCTDTLAGNSN------DIPPGAASASTPPHQEILSNLGGSRIGEHDFNGWGNGRGEMPFMPPMGSAIGILQGVQNLQGQGLSLSLSTQIPSTGQVPSMEYRGPNSGFSSFLNP-LSISGEG----------------------------LGGNSDSMKPDMSAYGMSSVARIIPNSKYLKAAQQLLDEVVNVRNALKQQDSKKGPTNNLKEDDHGGSKNETTLPSGGVSSNPQDSASNSPSELSAAEKQDLQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDTITGQIRVSRRSLGEQDASANGKGVGISRLRYVDQHLRQQRALQQLGMMQQHAWRPQRGLPESSVSVLRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMDSNSSSEVAPKAMNGDDISASEDRGEDLQHGATSTATEQCSTGQQFLDSKHDHVPDLEMLGTTSNTNFQNGTHGGTEIEYGVAKTRPSVDEGSVFPDTIVESDGGTGRYMTSAYHFSELGRFGNGIGVSLTLGLQHCEGGGGIPMSVDQNHHGFVSVRGDEVYNTASSSMGPQTSDFDTMDSGNRQHRYSSSHLLHDFVA 657
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5NQU2 ((BEL1-like homeodomain protein 6 {ECO:0000313|EMBL:TKR85071.1}))
HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0
Identity = 379/691 (54.85%), Postives = 474/691 (68.60%), Query Frame = 0
Match: A0A4U5NQU2 ((BEL1-like homeodomain protein 6 {ECO:0000313|EMBL:TKR85071.1}))
HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0
Identity = 379/691 (54.85%), Postives = 474/691 (68.60%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMNYPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTGGTNN-MNSRQNLQGQGLSLSLNPQLSSELQISSLHGRNPDLGGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASP--AAGQDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGS----AVGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTKDDTKTYEARGADLQNTATSSSNEKSMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDM--------NPPRVSVDECNVYANTMAQP-GSENKYL----DAYHVPEFGGFGNGNGVSLTLGLQQREDGSMPVSVGADTNFVMMRREEDY------VGFDSTDSE-----NRQHRVGSSHLWQDFVA 660
MATY+ +S+N+RD + YL SY E PV+PGNMMMYMN SGSYSD LAGNS QN I+ SV S QE +SNLG SR GE WRDGRNEM ++ + G ++ ++ Q++QGQGLSLSL Q+ S +Q+ S+ RN + G +SFLSP+++++GD R+G+ RDD Q RN EY+ P G + + K D+S + M +I R +PNSKYLKAAQQLLDEVVNV KALKQ +++K++ ++ DG S S A+ ++N P+ELS +E+ ELQNK+ KLLSMLDEV++RYKQY+HQMQIVVSSFDVISG GAAKPYT+LALQTISR FRCLRDAI GQI T+ SL EQ+ S VGI+RLRYVDQ LRQQRAL QLG+MQQH WRPQRGLPESSVSILRAWLFEHFLHPYPKDS+KI+LARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE GDAEM+ SSS+ A TK D T E RG + Q +A+S++ E+ Q + + HVPD++M S T+S+FQ GE R S+D+C ++++ MA G ++++ AY + E G FGNG+GVSLTLGLQ E G++P+S FV MR ++D VG +TD E NRQHR SSH++ DFVA
Sbjct: 1 MATYYTSSNNQRDGAAMVYLP----GSYPEAPVLPGNMMMYMN----SGSYSDNLAGNSHQQNNYIEFQSVENSDSTPQQQEILSNLGGSRLGEHGFGAWRDGRNEMLVLHSVSGASSVLHGAQSMQGQGLSLSLGTQIQSGIQMPSISYRNTNPGLTSFLSPNSSITGDGGGRNGSSRDD------QSRNIEYLTPGFSGGNHDVNKGDLSPYGMNSIARTIPNSKYLKAAQQLLDEVVNVRKALKQPDKEKNQT-TSEHGLNSAKDGDSGSKNGASNLQESTNSPSELSHAERQELQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVISGCGAAKPYTALALQTISRHFRCLRDAITGQIHATRKSLGEQETSENSKGVGITRLRYVDQHLRQQRALHQLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEELGDAEMDSNSSSENAAKATKGDMGTSEDRGEEFQQSASSTATERCSAGQLMDPKSDHVPDMEMAGSTTRSNFQNGTRGEAFTEYGLLKLREDQRPSMDDCGLFSDAMAHSEGGGDRFMAAAAAAYQMSEVGRFGNGSGVSLTLGLQHCEGGNLPMSGTTHHGFVSMRGDDDIYNAASSVGAGATDFECLNPGNRQHRFSSSHVFHDFVA 676
BLAST of DCAR_028962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7H400 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0
Identity = 389/692 (56.21%), Postives = 472/692 (68.21%), Query Frame = 0
Match: A0A7J7H400 (Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071})
HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0
Identity = 389/692 (56.21%), Postives = 472/692 (68.21%), Query Frame = 0
Query: 1 MATYFPNSSNERDSVPINYLREPLLNSYSETPVIPGNMMMYMN-YPSSSGSYSDTLAGNSQHQNTSIDLPSVGALHSNLSHQEFMSNLGVSRAGELDLSVWRDGRNEMPLMQTTG-GTNNMNSRQNLQGQGLSLSLNPQLSSELQISSLHGRNPDLGGSSFLSPHTALSGDDIDRHGTFRDDETYQNRQPRNTEYILPDVLGSSSALLKADVSSFAMQNILRNVPNSKYLKAAQQLLDEVVNVHKALKQHERKKDRVGDCVEADRASIDGTSASPAAG-----QDSTSNGPNELSASEKHELQNKMAKLLSMLDEVNKRYKQYFHQMQIVVSSFDVISGSGAAKPYTSLALQTISRQFRCLRDAINGQIRVTQVSLREQDGSA----VGISRLRYVDQQLRQQRALQQLGVMQQHTWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIVLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMECYSSSDIAPNTTK-DDTKTYEARGADLQNTATSSSNEK-SMIRQFSESRPGHVPDVDMVRSGTQSSFQMLNHGETDMN----PPRVSVDECNVYANTMAQP-GSENKYL-DAYHVPEFGGFGNGNGVSLTLGLQQRE-DGSMPVSVGADTN-FVMMRREEDY-----------VGFDSTDSENRQHRVGSSHLWQDFVA 660
MAT+FPNS+++R + P+ YLRE L +SYSE+PVIP NMMMYMN Y SSSG +DTL GNS D+P A S HQE +SNLG SR GE D + W +GR EMP M G + QNLQGQGLSLSL+ Q+ S Q+ S+ R P+ G SSFL+P ++SG+ LG +S +K D+S++ M ++ R +PNSKYLKAAQQLLDEVVNV ALKQ + KK + E D + P+ G QDS SN P+ELSA+EK +LQNK+ KLLSMLDEV++RYKQY+HQMQIVVSSFDVI+G GAAKPYT+LALQTISR FRCLRD I GQIRV++ SL EQD SA VGISRLRYVDQ LRQQRALQQLG+MQQH WRPQRGLPESSVS+LRAWLFEHFLHPYPKDS+KI+LARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEM+ SSS++AP DD E RG DLQ+ ATS++ E+ S +QF +S+ HVPD++M+ + + ++FQ HG T++ R SVDE +V+ +T+ + G +Y+ AYH E G FGNG GVSLTLGLQ E G +P+SV + + FV +R +E Y FD+ DS NRQHR SSHL DFVA
Sbjct: 1 MATFFPNSNDQRYAAPMLYLRESLPSSYSESPVIPSNMMMYMNNYSSSSGPCTDTLPGNSN------DIPPGAASASTPPHQEILSNLGGSRIGEHDFNGWGNGRGEMPFMPPMGSAIGILQGVQNLQGQGLSLSLSTQIPSTGQVPSMEYRGPNSGFSSFLNP-LSISGEG----------------------------LGGNSDSMKPDMSAYGMSSVARIIPNSKYLKAAQQLLDEVVNVRNALKQQDSKKGPTNNLKEDDHGGSKNETTLPSGGVSSNPQDSASNSPSELSAAEKQDLQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDTITGQIRVSRRSLGEQDASANGKGVGISRLRYVDQHLRQQRALQQLGMMQQHAWRPQRGLPESSVSVLRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAEMDSNSSSEVAPKAMNGDDISASEDRGEDLQHGATSTATEQCSTGQQFLDSKHDHVPDLEMLGTTSNTNFQNGTHGGTEIEYGVAKTRPSVDEGSVFPDTIVESDGGTGRYMTSAYHFSELGRFGNGIGVSLTLGLQHCEGGGGIPMSVDQNHHGFVSVRGDEVYNTASSSMGPQTSDFDTMDSGNRQHRYSSSHLLHDFVA 657
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5B0K9 | E-Value: 0.000e+0, PID: 59.65 | Homeobox domain-containing protein {ECO:0000259|PR... [more] |
| A0A5B6ZTS5 | E-Value: 0.000e+0, PID: 58.26 | (Putative BEL1-like homeodomain protein 3 {ECO:000... [more] |
| A0A7N2MZM0 | E-Value: 0.000e+0, PID: 57.36 | Homeobox domain-containing protein {ECO:0000259|PR... [more] |
| A0A5B6ZSL1 | E-Value: 0.000e+0, PID: 58.60 | (Putative BEL1-like homeodomain protein 3 {ECO:000... [more] |
| A0A5B6ZTX5 | E-Value: 0.000e+0, PID: 57.83 | (Putative BEL1-like homeodomain protein 3 {ECO:000... [more] |
| A0A5B6ZQW3 | E-Value: 0.000e+0, PID: 58.23 | (Putative BEL1-like homeodomain protein 3 {ECO:000... [more] |
| A0A835DMD0 | E-Value: 0.000e+0, PID: 51.39 | (Uncharacterized protein {ECO:0000313|EMBL:KAF8405... [more] |
| A0A4S4DZE1 | E-Value: 0.000e+0, PID: 56.21 | Homeobox domain-containing protein {ECO:0000259|PR... [more] |
| A0A4U5NQU2 | E-Value: 0.000e+0, PID: 54.85 | (BEL1-like homeodomain protein 6 {ECO:0000313|EMBL... [more] |
| A0A7J7H400 | E-Value: 0.000e+0, PID: 56.21 | Homeobox domain-containing protein {ECO:0000259|PR... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |