Resource Type:
Polypeptide
Name:
DCAR_000602
Identifier:
DCAR_000602.mRNA-protein
Sequence:
MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSW
NALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELV
LHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQ
SNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVS
NGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPK
QRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVE
IVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGL
LTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIK
EEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYAS
NGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNS
SSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRH
LDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVD
PELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSE
IKASSLAWAELALSP*
Sequence Length:
666
Sequence Checksum:
f18d91fe03a4997746678508696f7b65
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_000602, derives from mRNA, DCAR_000602. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZN15 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1042.34 bits (2694), Expect = 0.000e+0
Identity = 497/664 (74.85%), Postives = 575/664 (86.60%), Query Frame = 0
Match: A0A5B6ZN15 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1042.34 bits (2694), Expect = 0.000e+0
Identity = 497/664 (74.85%), Postives = 575/664 (86.60%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M PLQ +WV LG+LL CDA +EV ALT FKEA+++DPLL LS+WNAL ++PC+W GISCSM DHVIKLN+SGSSLKGFL P + LS LQEL+LHGN IGIIPKEIG+LK L+VLDLG NQLSG IPPEIGNL+SI+KINLQSNGL+G LP ELGNLK LEELRLDRNKLQGTVPG++ S V SNMHGM SN CR SQLKVADFSYNFFVGS+PKCL+YLP SSFQGNCL DRDPKQRPT +CG + PP KS P V KH+P+ED S H SKP+W+LA+E+VTG + GSLFLVAL L++CK+++SI++PWKKS +++DHMT+Y+++ +L D+ ++SRQELEVACEDFSNIIGSS DS+VYKG +K GPEIAVISLC+KEEHWTG+LELYFQ+EVADLARL+HEN GKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM IVIGIA+GLKYLHT++EPPFTISELNSS+VYLT+ FSPKLVDFESWKTI+SRSEKNSG+IS EGA+CVLP+SL+ R LDVQGNIYAFGVLLLE+ISGRPP+CK+KGCLVDWAK++L+ PEVMS VVDPELKHFR +DLKVICEV +LCI PN + +MQELCT+LESRIDTSVS+E+KASSLAWAELALS
Sbjct: 1 MRPFSPLQLVWVSLGLLLVPCDALASNEVSALTTFKEAVFEDPLLVLSNWNALAADPCDWPGISCSMARDHVIKLNISGSSLKGFLVPALGLLSFLQELILHGNSLIGIIPKEIGMLKYLKVLDLGVNQLSGSIPPEIGNLTSIMKINLQSNGLTGTLPPELGNLKYLEELRLDRNKLQGTVPGSSSSHVTSNMHGMSASN-----FCRSSQLKVADFSYNFFVGSIPKCLDYLPRSSFQGNCLQDRDPKQRPTARCGGT-----PPAKSSPEVNPKHQPAEDGSKHQVASKPAWLLALEVVTGTMVGSLFLVALLTALQKCKSKSSIIIPWKKSASEKDHMTIYIDSEMLKDILRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCVKEEHWTGFLELYFQREVADLARLNHENTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVIGIARGLKYLHTQLEPPFTISELNSSAVYLTEDFSPKLVDFESWKTILSRSEKNSGSISHEGAICVLPNSLEKRSLDVQGNIYAFGVLLLEIISGRPPYCKDKGCLVDWAKDFLELPEVMSYVVDPELKHFRYEDLKVICEVVTLCIHPNSTDRASMQELCTMLESRIDTSVSAELKASSLAWAELALS 654
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7TW14 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1024.62 bits (2648), Expect = 0.000e+0
Identity = 479/664 (72.14%), Postives = 569/664 (85.69%), Query Frame = 0
Match: D7TW14 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1024.62 bits (2648), Expect = 0.000e+0
Identity = 479/664 (72.14%), Postives = 569/664 (85.69%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M S LQ LWV G+L A+CDAF +EV AL KE IY+DPL LS+WN +DS+PC+WSGI+CS DHVIK+N+SGSSLKGFL PE+ +LSSLQEL+LHGN IG+IPKEIG LK+L+VLDLG NQL+GPIPPEIGNL+SI+KINL+SNGLSGRLP ELGNL+ LEELRLDRN+L+GTVPG+N S S+++GMY S+ N GLCR SQ KVADFSYNFFVGS+PKCL YLP +SFQGNCL D P+QR T QC PPP KS PGV KH+P+ D H D SKP+W+LA+EIVTG + GSL ++AL L+RCK+++SI++PWKKS ++++HM +Y+++ +L DV ++SRQELEVACEDFSNIIGSS DS+VYKG +K GPEIAVISLCIKEEHW GYLELYFQKEVADLARL+HEN GKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM I+IGI +GLKYLHTE++PPFTISELNSS+VY+T+ FSPKLVDFESWK+I+SRSEKNSG+I +GA+CVLP+SL+ RHLDVQGN+YAFGVLLLE++SGRPP+CK+KGCLV+WA++YLD PE MS VVDPELKHFR DDLKVICEV +LCI P P + +MQELCT+LE++IDTS+SSE+KASSLAWAELALS
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDWSGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNLKVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEGTVPGSNTSNFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQGNCLQDTAPRQRSTVQCAV-----PPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGTMVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHENTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYLHTELDPPFTISELNSSAVYITEDFSPKLVDFESWKSILSRSEKNSGSIGSQGAICVLPNSLEGRHLDVQGNVYAFGVLLLEIMSGRPPYCKDKGCLVEWARDYLDLPEAMSYVVDPELKHFRYDDLKVICEVVNLCIHPEPTKRPSMQELCTMLETKIDTSISSELKASSLAWAELALS 659
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438JJH3 ((Putative LRR receptor-like serine/threonine-protein kinase {ECO:0000313|EMBL:RVX09111.1}))
HSP 1 Score: 1024.62 bits (2648), Expect = 0.000e+0
Identity = 479/664 (72.14%), Postives = 569/664 (85.69%), Query Frame = 0
Match: A0A438JJH3 ((Putative LRR receptor-like serine/threonine-protein kinase {ECO:0000313|EMBL:RVX09111.1}))
HSP 1 Score: 1024.62 bits (2648), Expect = 0.000e+0
Identity = 479/664 (72.14%), Postives = 569/664 (85.69%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M S LQ LWV G+L A+CDAF +EV AL KE IY+DPL LS+WN +DS+PC+WSGI+CS DHVIK+N+SGSSLKGFL PE+ +LSSLQEL+LHGN IG+IPKEIG LK+L+VLDLG NQL+GPIPPEIGNL+SI+KINL+SNGLSGRLP ELGNL+ LEELRLDRN+L+GTVPG+N S S+++GMY S+ N GLCR SQ KVADFSYNFFVGS+PKCL YLP +SFQGNCL D P+QR T QC PPP KS PGV KH+P+ D H D SKP+W+LA+EIVTG + GSL ++AL L+RCK+++SI++PWKKS ++++HM +Y+++ +L DV ++SRQELEVACEDFSNIIGSS DS+VYKG +K GPEIAVISLCIKEEHW GYLELYFQKEVADLARL+HEN GKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM I+IGI +GLKYLHTE++PPFTISELNSS+VY+T+ FSPKLVDFESWK+I+SRSEKNSG+I +GA+CVLP+SL+ RHLDVQGN+YAFGVLLLE++SGRPP+CK+KGCLV+WA++YLD PE MS VVDPELKHFR DDLKVICEV +LCI P P + +MQELCT+LE++IDTS+SSE+KASSLAWAELALS
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDWSGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNLKVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEGTVPGSNTSNFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQGNCLQDTAPRQRSTVQCAV-----PPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGTMVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHENTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYLHTELDPPFTISELNSSAVYITEDFSPKLVDFESWKSILSRSEKNSGSIGSQGAICVLPNSLEGRHLDVQGNVYAFGVLLLEIMSGRPPYCKDKGCLVEWARDYLDLPEAMSYVVDPELKHFRYDDLKVICEVVNLCIHPEPTKRPSMQELCTMLETKIDTSISSELKASSLAWAELALS 659
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZT78 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1024.23 bits (2647), Expect = 0.000e+0
Identity = 493/663 (74.36%), Postives = 573/663 (86.43%), Query Frame = 0
Match: A0A5B6ZT78 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1024.23 bits (2647), Expect = 0.000e+0
Identity = 493/663 (74.36%), Postives = 573/663 (86.43%), Query Frame = 0
Query: 3 SLVPLQFLWVG-LGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
+LV ++F +G LG CDA +EV ALT FKEA+++DPLL LS+WNAL ++PC+W GISCSM DHVIKLN+SGSSLKGFL P + LS LQEL+LHGN IGIIPKEIG+LK L+VLDLG NQLSG IPPEIGNL+SI+KINLQSNGL+G LP ELGNLK LEELRLDRNKLQGTVPG++ S V SNMHGM SN CR SQLKVADFSYNFFVGS+PKCL+YLP SSFQGNCL DRDPKQRPT +CG + PP KS P V KH+P+ED S H SKP+W+LA+E+VTG + GSLFLVAL L++CK+++SI++PWKKS +++DHMT+Y+++ +L D+ ++SRQELEVACEDFSNIIGSS DS+VYKG +K GPEIAVISLC+KEEHWTG+LELYFQ+EVADLARL+HEN GKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM IVIGIA+GLKYLHT++EPPFTISELNSS+VYLT+ FSPKLVDFESWKTI+SRSEKNSG+IS EGA+CVLP+SL+ R LDVQGNIYAFGVLLLE+ISGRPP+CK+KGCLVDWAK++L+ PEVMS VVDPELKHFR +DLKVICEV +LCI PN + +MQELCT+LESRIDTSVS+E+KASSLAWAELALS
Sbjct: 57 NLVFMEFSSLGILGFAXVPCDALASNEVSALTTFKEAVFEDPLLVLSNWNALAADPCDWPGISCSMARDHVIKLNISGSSLKGFLVPALGLLSFLQELILHGNSLIGIIPKEIGMLKYLKVLDLGVNQLSGSIPPEIGNLTSIMKINLQSNGLTGTLPPELGNLKYLEELRLDRNKLQGTVPGSSSSHVTSNMHGMSASN-----FCRSSQLKVADFSYNFFVGSIPKCLDYLPRSSFQGNCLQDRDPKQRPTARCGGT-----PPAKSSPEVNPKHQPAEDGSKHQVASKPAWLLALEVVTGTMVGSLFLVALLTALQKCKSKSSIIIPWKKSASEKDHMTIYIDSEMLKDILRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCVKEEHWTGFLELYFQREVADLARLNHENTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVIGIARGLKYLHTQLEPPFTISELNSSAVYLTEDFSPKLVDFESWKTILSRSEKNSGSISHEGAICVLPNSLEKRSLDVQGNIYAFGVLLLEIISGRPPYCKDKGCLVDWAKDFLELPEVMSYVVDPELKHFRYEDLKVICEVVTLCIHPNSTDRASMQELCTMLESRIDTSVSAELKASSLAWAELALS 709
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZPJ5 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1023.85 bits (2646), Expect = 0.000e+0
Identity = 483/664 (72.74%), Postives = 573/664 (86.30%), Query Frame = 0
Match: A0A5J4ZPJ5 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1023.85 bits (2646), Expect = 0.000e+0
Identity = 483/664 (72.74%), Postives = 573/664 (86.30%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M Q +W+ LG+ L ACDA +EV LT FKEAI++DPL LS+WNAL ++PC+WSGISCSM DHVIKLN+SGSSLKGFLAPE+ RLSSLQEL+LHGN IGIIPKEIG+LK+L+VLDLG NQL+G IPPE GNL+ I+KINLQSNGL+GRLP ELGNLK L+ELRLDRNKLQGTVPGN S S+ HGMY S+ G+CR SQL VADFSYNFFVGS+PKCL++LP SSFQGNCL +RDPKQRPT +CG + PP KS P V KH+P+ED S H SKP+W+LA+E+VTG + GSLFLVAL L++CK+++SI++PWKKS +++D+MT+Y+++ +L D+ ++SRQELEVACEDFSNIIGSS DS+VYKG +K GPEIAVISLCIKEEHWT +LELYFQ+EVADLARL+HEN GKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM IVIG+A+GLKYLHTE+EPPFTISELNSS+VYLT+ FSPKLVDFESWKTI+SRSEKNSG+I +G +CVLP+SL+ R+LDVQGNI AFGVLLLE+ISGRPP+CK++GCLVDWAK++L+ PEVMS VVDPELKHFR +DLKVICEV +LCI PNP+ + +MQELC++LES IDTSVS+++KASSLAWAELALS
Sbjct: 1 MRPFSTFQLVWISLGLFLVACDALESNEVSTLTIFKEAIFEDPLQVLSNWNALVADPCHWSGISCSMARDHVIKLNISGSSLKGFLAPELGRLSSLQELILHGNCLIGIIPKEIGMLKNLKVLDLGVNQLTGSIPPEFGNLTGIMKINLQSNGLTGRLPPELGNLKYLDELRLDRNKLQGTVPGNISSDFTSSTHGMYASSNYTTGICRLSQLNVADFSYNFFVGSIPKCLDHLPRSSFQGNCLQERDPKQRPTARCGGT-----PPAKSHPEVNPKHQPAEDGSKHQPASKPAWLLALEVVTGTMVGSLFLVALLTALQKCKSKSSIIIPWKKSASEKDNMTIYIDSEMLKDILRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTDFLELYFQREVADLARLNHENTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVIGVARGLKYLHTELEPPFTISELNSSAVYLTEDFSPKLVDFESWKTILSRSEKNSGSIPNKGPICVLPNSLEKRNLDVQGNISAFGVLLLEIISGRPPYCKDRGCLVDWAKDFLELPEVMSYVVDPELKHFRYEDLKVICEVVTLCIHPNPINRASMQELCSMLESGIDTSVSADLKASSLAWAELALS 659
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZVK2 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1010.75 bits (2612), Expect = 0.000e+0
Identity = 482/664 (72.59%), Postives = 568/664 (85.54%), Query Frame = 0
Match: A0A5J4ZVK2 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 1010.75 bits (2612), Expect = 0.000e+0
Identity = 482/664 (72.59%), Postives = 568/664 (85.54%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M L P Q LWV LG+ + ACDAFP +EV AL FKEAIY+DPLL LS+WNALD++PC+WSGI CS DHVIKLN+S SSLKGFLAPE+ LSSLQEL+LHGN IGIIPKEIG L L+VLDLG NQLSG IPPEIGNL+SI+KINLQSNGL+GRLP ELGNLK LEELRLDRNKLQGTVPG++ S SNMHGMY S+ G CR S+LKV DFSYNFFVGS+PKCLEYLP SF+GNCL DRD KQRPT CG + PPPKS+P V KH+P++DKS H SKP+W+LA+EIVTG + GSLFLVAL +++CKN++SI++PWKKS +++D +T+Y+++ +L DV ++SRQELEVACEDFSNIIGSS DS VYKG +K GPEIAVISLCIKEE+WT +LELYFQ+EVADLARL+HEN GKLLGYCRES+PFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM IV+GIA+GLKYLHTE++PPFTISELNSS+VYLT+ FSPKLVDFESWK+I+SRSEKNSG+I EGA+CVLP+S ++R+LD+QGNIYAFGVLLLE+ISGRP +CK+KGCLVDWAK++L+ PE MS VVDPELKHF+ ++LKVICEV +LC +PNP +MQ++ T+LESRIDTSV + + ASSLAWAELALS
Sbjct: 1 MRPLCPFQLLWVSLGLFILACDAFPSNEVYALNTFKEAIYEDPLLVLSNWNALDADPCDWSGIYCSTARDHVIKLNISWSSLKGFLAPELGYLSSLQELILHGNGLIGIIPKEIGKLNYLKVLDLGVNQLSGSIPPEIGNLTSIMKINLQSNGLTGRLPHELGNLKGLEELRLDRNKLQGTVPGSSSSDFTSNMHGMYASSDYATGFCRPSRLKVVDFSYNFFVGSIPKCLEYLPRLSFRGNCLEDRDIKQRPTALCGGT-----PPPKSRPEVNPKHQPAKDKSKHQAPSKPAWLLALEIVTGTMMGSLFLVALITTVQKCKNKSSIIIPWKKSASEKDRVTVYIDSEMLKDVLRFSRQELEVACEDFSNIIGSSPDSQVYKGTMKDGPEIAVISLCIKEENWTDFLELYFQREVADLARLNHENTGKLLGYCRESTPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVLGIARGLKYLHTELDPPFTISELNSSAVYLTEDFSPKLVDFESWKSILSRSEKNSGSIGNEGAICVLPNSFETRNLDIQGNIYAFGVLLLEIISGRPQYCKDKGCLVDWAKDFLELPEAMSYVVDPELKHFKYEELKVICEVVTLCFRPNPSDGASMQKIYTMLESRIDTSVFAGVTASSLAWAELALS 659
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3Z3A6 ((probable LRR receptor-like serine/threonine-protein kinase At1g63430 {ECO:0000313|RefSeq:XP_016458909.1}))
HSP 1 Score: 1004.59 bits (2596), Expect = 0.000e+0
Identity = 474/653 (72.59%), Postives = 561/653 (85.91%), Query Frame = 0
Match: A0A1S3Z3A6 ((probable LRR receptor-like serine/threonine-protein kinase At1g63430 {ECO:0000313|RefSeq:XP_016458909.1}))
HSP 1 Score: 1004.59 bits (2596), Expect = 0.000e+0
Identity = 474/653 (72.59%), Postives = 561/653 (85.91%), Query Frame = 0
Query: 12 VGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
V LG+ + CDAFP +EV AL FKEAIY+DPLL LS+WNALDS+PC+W+GI CSM DHVIK+N+SG+SLKGFL+P + +LSSLQEL+LHGN IG IPKEIGLLK+L+VLDLGANQL+GPIPPE+GNL I+KINLQSNGL+G+LP+ELGNLK LEELRLDRNKLQG VP NNGS S +HGMY S +P G CR SQLKVADFS+NF +GS+PKCL YLP SSFQGNCL +DPKQR CG + PPP V +KHR E + SKP+W+LA+E+VTGV+ GSLF+VAL GL +CK+++SI+ PWKKS + +D+MT+Y++TG+L DV +YSRQELEVACEDFSNIIGSS DS+VYKG +K GPEIAVISLC+KEEHWT YLELYFQKEVA+LAR++HENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGC +SWTRRM IVIGIAKGL YLH+E++PPFTISELNS+SVYLT+ FSPKLVDFESWK+IISRSEKNSGAIS EGA+CVLP++L+SRHLDVQGN YAFGVLLLE+ISGRPP+CK+KGCLVDWAKE+L+ PEV+S VVDPELKHF+ +DLKVICEV +LCI P+ + +M++LC +LES IDTS+++E+KASSLAWAELALS
Sbjct: 11 VTLGLYVVICDAFPSNEVYALNTFKEAIYEDPLLFLSNWNALDSDPCDWAGIFCSMAQDHVIKINISGASLKGFLSPNLHQLSSLQELILHGNVLIGTIPKEIGLLKNLKVLDLGANQLTGPIPPELGNLKDIMKINLQSNGLTGKLPAELGNLKYLEELRLDRNKLQGIVPANNGSDFTSGVHGMYASGASPTGFCRSSQLKVADFSFNFLIGSIPKCLGYLPKSSFQGNCLQHKDPKQRSASLCGGT----PPPTSHASTVDNKHRSVEGPRHQASSSKPTWLLALEVVTGVMVGSLFIVALVTGLHKCKSKSSII-PWKKSGSGKDNMTIYVDTGMLKDVVRYSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCVKEEHWTAYLELYFQKEVAELARINHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCNISWTRRMKIVIGIAKGLTYLHSELDPPFTISELNSNSVYLTEDFSPKLVDFESWKSIISRSEKNSGAISSEGAICVLPNTLESRHLDVQGNTYAFGVLLLEIISGRPPYCKDKGCLVDWAKEFLEVPEVLSYVVDPELKHFKQEDLKVICEVINLCIHPSSSRRTSMKDLCAMLESNIDTSITAELKASSLAWAELALS 658
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7HTK8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 998.423 bits (2580), Expect = 0.000e+0
Identity = 477/665 (71.73%), Postives = 563/665 (84.66%), Query Frame = 0
Match: A0A3Q7HTK8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 998.423 bits (2580), Expect = 0.000e+0
Identity = 477/665 (71.73%), Postives = 563/665 (84.66%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLS-KHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M + V Q L V +G++L CDAFP +EV AL FKEAIY+DPLL LS+WN LDS+PC W+G+ CSM DHVIK+N+SG+SLKGFL+P + LSSLQEL+LHGN IG IPKEIGLLK+L+VLDLGANQL+GPIP E+GNL+ I+KINLQSNGL+G+LP+ELGNLK LEELRLDRNKLQG VP N GS S + GMY S + G CR SQLKVADFS+NF +GS+PKCL YLP SSFQGNCL +DPKQR CGS+ PP S LS KH+P E+ H SKP+W+LA+E+VTGV+ GSLF+V L GL+R KN++SI+ PWKKS +++DHMT+Y++TG+L DV +YSRQELEVACEDFSNIIGSS DSIVYKG +K GPEIAVISLC+KEEHWT YLELYFQKEVA+LAR++HENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM IVIGIAKGL Y H+E++PPFTISELNS+SVYLT+ FSPKLVDFESWK+IISRSEKNSGAIS EGA+CVLP++L+SR LDVQGNIYAFGVLLLE+ISGRPP+CK+KGCLVDWAKE+L+ PEV+S VVDPELKHF+ +DLKVICEV +LCI P + ++++LC +LES IDTS+++E+KASSLAWAELALS
Sbjct: 1 MRTCVVFQVL-VTVGLVLGICDAFPSNEVYALNTFKEAIYEDPLLVLSNWNGLDSDPCGWAGVFCSMAQDHVIKINISGASLKGFLSPNLHLLSSLQELILHGNVLIGTIPKEIGLLKNLKVLDLGANQLTGPIPSELGNLTKIMKINLQSNGLTGKLPAELGNLKYLEELRLDRNKLQGLVPANTGSDFTSAVRGMYASGASATGFCRTSQLKVADFSFNFLIGSIPKCLGYLPKSSFQGNCLQHKDPKQRSAALCGST-----SPPTSHASTLSNKHQPVEEP-RHQTSSKPTWLLALEVVTGVMVGSLFIVGLVTGLQRLKNKSSII-PWKKSGSEKDHMTIYVDTGMLKDVVRYSRQELEVACEDFSNIIGSSPDSIVYKGTMKGGPEIAVISLCVKEEHWTAYLELYFQKEVAELARINHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVIGIAKGLTYFHSELDPPFTISELNSNSVYLTEDFSPKLVDFESWKSIISRSEKNSGAISSEGAICVLPNTLESRRLDVQGNIYAFGVLLLEIISGRPPYCKDKGCLVDWAKEFLEMPEVLSYVVDPELKHFKQEDLKVICEVINLCIHPTTSRRTSIKDLCAILESNIDTSITAELKASSLAWAELALS 657
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6KIE1 ((Putative lrr receptor-like serinethreonine-protein kinase {ECO:0000313|EMBL:OIT22571.1}))
HSP 1 Score: 997.653 bits (2578), Expect = 0.000e+0
Identity = 473/666 (71.02%), Postives = 565/666 (84.83%), Query Frame = 0
Match: A0A1J6KIE1 ((Putative lrr receptor-like serinethreonine-protein kinase {ECO:0000313|EMBL:OIT22571.1}))
HSP 1 Score: 997.653 bits (2578), Expect = 0.000e+0
Identity = 473/666 (71.02%), Postives = 565/666 (84.83%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGI-LLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLSKHRPSEDKSNHH-DDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M + L L V L + + CDAFP +EV AL FKEAIY+DPLL LS+WNALDS+PC+W+GI CSM DHVIK+N+SG+SLKGFL+P + +L+SLQEL+LHGN IG IPKEIGLLK+L+VLDLGANQL+GPIP E+GNL++++KINLQSNGL+G+LP+ELGNLK LEELRLDRNKLQGTVP NNGS S +HGMY S +P G CR SQLKVADFS+NF +GS+PKCL YLP SSFQGNCL +DPKQR CG + PPP S ++ PS + H SKP+W+LA+E+VTGV+ GSLF+VAL GL +CKN++SI+ PWKKS + +D+MT+Y++TG+L DV +YSRQELEVACEDFSNIIGSS DS+VYKG +K GPEIAVISLC+KEEHWT YLELYFQKEVA+LAR++HEN GKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGC LSWTRRM IVIGIAKGL YLH+E++PPFTISELNS+S+YLT+ FSPKLVDFESWK+IISRSEKNSGAIS EGA+CVLP++L+SRHLDVQGN YAFGVLLLE+ISGRPP+CK+KGCLVDWAKE+L+ PEV+S VVDPELKHF+ +DLKVICEV +LCI P+ + +M++LC +LES IDTS+++E+KASSLAWAELALS
Sbjct: 1 MRTFAFLSVLTVFLSVERIVICDAFPSNEVYALNTFKEAIYEDPLLVLSNWNALDSDPCDWAGIFCSMAQDHVIKINISGASLKGFLSPNLHQLASLQELILHGNVLIGTIPKEIGLLKNLKVLDLGANQLTGPIPRELGNLTNLMKINLQSNGLTGKLPAELGNLKYLEELRLDRNKLQGTVPANNGSDFTSGVHGMYASGASPTGFCRSSQLKVADFSFNFLIGSIPKCLGYLPKSSFQGNCLQHKDPKQRSASLCGGT-----PPPTSHASTVNNKHPSVEGPRHQTSSSKPTWLLALEVVTGVMVGSLFIVALVTGLHKCKNKSSII-PWKKSGSGKDNMTIYVDTGMLKDVVRYSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCVKEEHWTAYLELYFQKEVAELARINHENTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCNLSWTRRMKIVIGIAKGLTYLHSELDPPFTISELNSNSIYLTEDFSPKLVDFESWKSIISRSEKNSGAISSEGAICVLPNTLESRHLDVQGNTYAFGVLLLEIISGRPPYCKDKGCLVDWAKEFLEVPEVLSYVVDPELKHFKQEDLKVICEVINLCIHPSSSRRTSMKDLCNMLESNIDTSITAELKASSLAWAELALS 660
BLAST of DCAR_000602 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1AWD0 ((Receptor kinase {ECO:0000313|EnsemblPlants:PGSC0003DMT400031856}))
HSP 1 Score: 996.497 bits (2575), Expect = 0.000e+0
Identity = 478/665 (71.88%), Postives = 562/665 (84.51%), Query Frame = 0
Match: M1AWD0 ((Receptor kinase {ECO:0000313|EnsemblPlants:PGSC0003DMT400031856}))
HSP 1 Score: 996.497 bits (2575), Expect = 0.000e+0
Identity = 478/665 (71.88%), Postives = 562/665 (84.51%), Query Frame = 0
Query: 1 MSSLVPLQFLWVGLGILLAACDAFPEHEVDALTAFKEAIYDDPLLALSSWNALDSNPCNWSGISCSMTTDHVIKLNLSGSSLKGFLAPEICRLSSLQELVLHGNKFIGIIPKEIGLLKDLRVLDLGANQLSGPIPPEIGNLSSIIKINLQSNGLSGRLPSELGNLKDLEELRLDRNKLQGTVPGNNGSRVASNMHGMYVSNGNPAGLCRFSQLKVADFSYNFFVGSVPKCLEYLPNSSFQGNCLLDRDPKQRPTHQCGSSYPPPPPPPKSQPGVLS-KHRPSEDKSNHHDDSKPSWVLAVEIVTGVLFGSLFLVALAMGLRRCKNQTSIVLPWKKSTTDRDHMTMYLETGLLTDVAKYSRQELEVACEDFSNIIGSSSDSIVYKGIIKSGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLDHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIVIGIAKGLKYLHTEIEPPFTISELNSSSVYLTDTFSPKLVDFESWKTIISRSEKNSGAISCEGAVCVLPSSLDSRHLDVQGNIYAFGVLLLELISGRPPFCKNKGCLVDWAKEYLDQPEVMSKVVDPELKHFRDDDLKVICEVASLCIKPNPLVQLTMQELCTVLESRIDTSVSSEIKASSLAWAELALS 664
M V Q L V +G++L CDAFP +EV AL FKEAIY+DPLL LS+WN LDS+PC W+G+ CSM DHVIK+N+S +SLKGFL+P + LSSLQEL+LHGN IG IPKEIGLLK+L+ LDLGANQL+GPIP E+GNL++I+KINLQSNGL+G+LP+ELGNLK LEELRLDRNKLQG VP N GS S + GMY S + G CR SQLKVADFS+NF +GS+PKCL YLP SSFQGNCL +DPKQR CGS+ PPP S LS KH+P E+ H SKP+W+LA+E+VTGV+ GSLF+V L GL+R KN++SI+L WKKS +++DHMT+Y++TG+L DV YSRQELEVACEDFSNIIGSS DSIVYKG +K GPEIAVISLC+KEEHWT YLELYFQKEVA+LAR++HENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRM IVIGIAKGL Y H+E++PPFTISELNS+SVYLT+ FSPKLVDFESWK+IISRSEKNSGAIS EGA+CVLP++L+SRHLDVQGNIYAFGVLLLE+ISGRPP+CK+KGCLVDWAKE+L+ PEV+S VVDPELKHF+ +DLKVICEV +LCI P + +M++LC +LES IDTS+++E+KASSLAWAELALS
Sbjct: 1 MRLCVVFQVL-VTVGLVLGICDAFPSNEVYALNTFKEAIYEDPLLVLSNWNGLDSDPCGWAGVFCSMAQDHVIKINISDASLKGFLSPNLHLLSSLQELILHGNVLIGTIPKEIGLLKNLKALDLGANQLTGPIPSELGNLTNIMKINLQSNGLTGKLPAELGNLKYLEELRLDRNKLQGLVPANTGSDFTSGVRGMYASGASTTGFCRTSQLKVADFSFNFLIGSIPKCLGYLPKSSFQGNCLQHKDPKQRSAALCGST-----PPPTSHASTLSNKHQPVEEP-RHQTSSKPTWLLALEVVTGVMVGSLFIVGLVTGLQRLKNKSSIIL-WKKSGSEKDHMTIYVDTGMLKDVVIYSRQELEVACEDFSNIIGSSPDSIVYKGTMKGGPEIAVISLCVKEEHWTAYLELYFQKEVAELARINHENAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVIGIAKGLTYFHSELDPPFTISELNSNSVYLTEDFSPKLVDFESWKSIISRSEKNSGAISSEGAICVLPNTLESRHLDVQGNIYAFGVLLLEIISGRPPYCKDKGCLVDWAKEFLEVPEVLSYVVDPELKHFKQEDLKVICEVINLCIHPTTSRRTSMKDLCAILESNIDTSITAELKASSLAWAELALS 657
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6ZN15 | E-Value: 0.000e+0, PID: 74.85 | Protein kinase domain-containing protein {ECO:0000... [more] |
| D7TW14 | E-Value: 0.000e+0, PID: 72.14 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A438JJH3 | E-Value: 0.000e+0, PID: 72.14 | (Putative LRR receptor-like serine/threonine-prote... [more] |
| A0A5B6ZT78 | E-Value: 0.000e+0, PID: 74.36 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5J4ZPJ5 | E-Value: 0.000e+0, PID: 72.74 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5J4ZVK2 | E-Value: 0.000e+0, PID: 72.59 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A1S3Z3A6 | E-Value: 0.000e+0, PID: 72.59 | (probable LRR receptor-like serine/threonine-prote... [more] |
| A0A3Q7HTK8 | E-Value: 0.000e+0, PID: 71.73 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A1J6KIE1 | E-Value: 0.000e+0, PID: 71.02 | (Putative lrr receptor-like serinethreonine-protei... [more] |
| M1AWD0 | E-Value: 0.000e+0, PID: 71.88 | (Receptor kinase {ECO:0000313|EnsemblPlants:PGSC00... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |