Resource Type:
Polypeptide
Name:
DCAR_011386
Identifier:
DCAR_011386.mRNA-protein
Sequence:
MYSFQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKL
FVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDL
WTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLG
NMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANS
CTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHE
ETFLPGEVIAEQGDFMDQLYIVCHGKLGGTEGEFEEPVHFLQSHSSLGEM
SVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGK
TTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADT
SNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKH
SHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSK
NYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNK
TLIQLLENAKHDQLLKFPNCLKGFQDVQRKCTVFPFHSWDHQERRLGVVL
WIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD
NSET*
Sequence Length:
655
Sequence Checksum:
052f0906fb0692af359a388a463c94cc
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_011386, derives from mRNA, DCAR_011386. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7CAK4 ((Putative potassium channel SKOR-like {ECO:0000313|EMBL:MPA77166.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 457/654 (69.88%), Postives = 555/654 (84.86%), Query Frame = 0
Match: A0A5B7CAK4 ((Putative potassium channel SKOR-like {ECO:0000313|EMBL:MPA77166.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 457/654 (69.88%), Postives = 555/654 (84.86%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKL---GGTE-GEFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQD--VQRKCTVFPFHSWDHQ-ERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD 650
++ GRKEPVRYLLWIRLSRA+RVTE FEK+EKDIR+NYLFTRI+KL VVELYCTHTAACIFYYLATTLP ++EGYTWIGSL+MGDY+YSHFR+IDLW RYITSLYFAIVTMATVGYG++HAVN REMIF+M +VS DMILGAYLLGNM ALIVKGSKTE+FRDKMSDL++YMNR KL K I NEIKGHV+ QY ++ T+A+VLQDIP+S RA+IS++LY P +REVP+FKGCSSGF+KQIA +VHEE F PGE I EQG+ DQ+Y VC G L G +E E EEP L +SS GE+SVLCNI PYT++V E SKLLR+DKQ+F+ +L++YFSDGR IINNLLEGK + L+ K+LESDI LH+G+HESELAM+LNCAA+ GDL RLKRL+ AG D + TDYDGR PLHLAAS+G+EDI FL+Q+ + I DN+GNTPL EAIK+ H+ VASLLVK+GASL I DAG+ LCMAVVR+D ++LR+V+ G NPNSKNYDLRTPLHLASS+GLY++A +LL++GAS+F+KDRWGNTPLD+AR+GGNK LI+LLE+AK QL +FP+C +G QD +RKCTVFPF+ WDH+ E+ GVVLW+PQ+IEEL++ AK+QLK + I++E+GGKILD+ MICD QKLFLVS+
Sbjct: 171 YKVCGRKEPVRYLLWIRLSRALRVTEFFEKMEKDIRINYLFTRIVKLLVVELYCTHTAACIFYYLATTLPSSKEGYTWIGSLQMGDYSYSHFREIDLWKRYITSLYFAIVTMATVGYGEIHAVNTREMIFVMAYVSFDMILGAYLLGNMTALIVKGSKTERFRDKMSDLIKYMNRNKLEKNINNEIKGHVRLQYESNRTDASVLQDIPVSIRAKISQQLYEPKVREVPLFKGCSSGFIKQIAIRVHEELFFPGEEIIEQGNIADQVYFVCDGTLEEVGKSEDDETEEPHPRLPKYSSFGEISVLCNIPAPYTIRVCEISKLLRVDKQAFIEILEIYFSDGRIIINNLLEGKESNLRRKLLESDITLHVGKHESELAMRLNCAAYDGDLYRLKRLIGAGGDPNKTDYDGRLPLHLAASEGHEDITLFLIQQGVGIDILDNFGNTPLLEAIKNGHDQVASLLVKAGASLTIDDAGSRLCMAVVRKDLEFLRRVLTSGINPNSKNYDLRTPLHLASSEGLYSMAKLLLESGASIFSKDRWGNTPLDDARVGGNKNLIKLLEDAKCTQLSEFPDCFEGIQDKMQRRKCTVFPFNPWDHKVEKTHGVVLWVPQSIEELVKTAKEQLKYSVASCILSENGGKILDVDMICDDQKLFLVSE 824
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BE44 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8541403.1}))
HSP 1 Score: 954.51 bits (2466), Expect = 0.000e+0
Identity = 457/654 (69.88%), Postives = 552/654 (84.40%), Query Frame = 0
Match: A0A5J5BE44 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8541403.1}))
HSP 1 Score: 954.51 bits (2466), Expect = 0.000e+0
Identity = 457/654 (69.88%), Postives = 552/654 (84.40%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKL---GGTEGEFEEPVHF-LQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQD--VQRKCTVFPFHSWDHQ-ERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD 650
F+A GRKEPVRYLLWIRLSRA+RVTE FEKLEKDIR+NYLFTRI+KL VVELYCTHTAACIFYYLATTLPP+QEGYTWIGSL+MGDY+YSHFRDIDLWTRY TSLYFAIVTMATVGYGD+HAVN REMIFIMI+VS DMILGAYLLGNM ALIVKGSKTE++RDKM+DL++YMNR KLG QI EIKGHV+ Q+ + EA+VLQDIP+S RA+IS+ LY PY+R++P+FKGCSSGF+KQIA +VHEE F PGE I EQG+ DQ+Y VC G L G +E + E H L +SS+GEMSVLCNI PYTV V + S+LLR+DKQ+F+ +L++YF DGR IINNLLEGK + L+ K+LESDI LHIG+HESELA +LNCAA+ GD+ RLK L+ AGAD + TDYDGRSPLHLAAS+G+EDI FL+Q+ ++I DN+GNTPL AIK+ H+ VASLLVK+GASL I DAG+ LCMAVVR+D ++LR+V+ G NPNSKNYDLRTPLHLA+S+GLY++A +LL+AGAS+F+KDRWGNTPLD+AR+GGNK LI+LLE+ K QLL+FP+ +G Q +RKCTVFPF+ WDH E+ GVVLW+PQ+IE+LI+ AK+QLK G+ I++E+GGKILD+ MICD QKLFLVS+
Sbjct: 154 FKACGRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRINYLFTRIVKLLVVELYCTHTAACIFYYLATTLPPSQEGYTWIGSLQMGDYSYSHFRDIDLWTRYTTSLYFAIVTMATVGYGDIHAVNAREMIFIMIYVSFDMILGAYLLGNMTALIVKGSKTERYRDKMTDLIKYMNRNKLGNQIQKEIKGHVRLQHQSRHAEASVLQDIPVSIRAKISQELYEPYVRQIPLFKGCSSGFIKQIAIRVHEEIFFPGEAIIEQGNTADQVYFVCDGTLVEEGKSEDDETEIPHLCLTKYSSIGEMSVLCNIPAPYTVLVSQISRLLRVDKQAFIEVLEIYFFDGRIIINNLLEGKESNLRKKLLESDITLHIGKHESELATRLNCAAYDGDMYRLKCLIGAGADPNKTDYDGRSPLHLAASEGHEDITLFLIQQGVGINIFDNFGNTPLLGAIKNGHDQVASLLVKAGASLTIDDAGSYLCMAVVRKDLEFLRRVLASGINPNSKNYDLRTPLHLAASEGLYSMAKLLLEAGASIFSKDRWGNTPLDDARVGGNKNLIKLLEDTKCTQLLEFPDFFEGIQGKMQRRKCTVFPFNPWDHNTEKTQGVVLWVPQSIEDLIKTAKEQLKYSGASCILSENGGKILDVDMICDDQKLFLVSE 807
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6GSP6 ((Uncharacterized protein {ECO:0000313|EMBL:CCB43301.1}))
HSP 1 Score: 927.932 bits (2397), Expect = 0.000e+0
Identity = 439/657 (66.82%), Postives = 540/657 (82.19%), Query Frame = 0
Match: F6GSP6 ((Uncharacterized protein {ECO:0000313|EMBL:CCB43301.1}))
HSP 1 Score: 927.932 bits (2397), Expect = 0.000e+0
Identity = 439/657 (66.82%), Postives = 540/657 (82.19%), Query Frame = 0
Query: 1 MYSFQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKL---GGTEGEFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNC---LKGFQDVQRKCTVFPFHSWD-HQERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD 650
+Y GRKEPVRYLLWIRLSRA+RVTE FEKLEKDIR+NYLFTRI+KL VVELYCTH AACIFYYLATT+P +QEGYTWIGSLKMGDY+YSHFRDIDLW RY TSLYFAIVTMATVGYGD+HAVN REM+F+M +VS DMILGAYLLGNM ALIVKGSKTEKFRD+M++L+ YMNR KLG+QI NEIK H++SQY S TEAA+LQDIP+S RA+IS++LY PYI +V +FKGCS GF+KQIA++VHEE FLPGEVI E+G+ +DQLYIVC+GKL G E E E P+ LQ++ S GE+ +LCN YTVQV+E +L+RLDKQSF+N+L++YFSDGR I+NNLLEGK + L+NKILESDI L+IG+ E+E+AM++NCAA+ GDL +L+RL+ A AD + TDY+GRSPLH AASKG EDI +L++ + ++DN+GNTPL EAIK+ H+ V SLLVKSGA L + DAGNCLCM VVR D ++L++++ G NPN+KNYD RTPLHLA+S+GLY++ ++LL+AGASV AKDRWGNTPLDEARIGGNK LI+LLE A QL +F +C ++ + QRKCTVFPFH WD +ER+ GVVLWIP+ IEELIE A QLK I++E+G KI+D+ M+ D +KLFLV++
Sbjct: 73 IYQVSFCGRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRINYLFTRIVKLLVVELYCTHAAACIFYYLATTMPASQEGYTWIGSLKMGDYSYSHFRDIDLWKRYFTSLYFAIVTMATVGYGDIHAVNVREMLFVMAYVSFDMILGAYLLGNMTALIVKGSKTEKFRDRMAELISYMNRNKLGRQISNEIKHHMRSQYETSYTEAALLQDIPVSIRAKISQKLYGPYISKVSLFKGCSPGFLKQIATRVHEEIFLPGEVILEEGNMVDQLYIVCNGKLKGVGSNEDETEGPLIHLQTNDSFGEIPLLCNTPQAYTVQVVELCRLVRLDKQSFINILEIYFSDGRIILNNLLEGKGSNLRNKILESDITLYIGKREAEVAMRVNCAAYNGDLYQLRRLIEARADPNKTDYNGRSPLHFAASKGYEDITDYLIELRVNIHLSDNFGNTPLLEAIKNGHDGVTSLLVKSGALLTVEDAGNCLCMTVVRRDLNFLKRLLANGINPNAKNYDSRTPLHLAASEGLYSMTNLLLEAGASVLAKDRWGNTPLDEARIGGNKNLIKLLEEAMSAQLSEFSSCSQEIRADKMRQRKCTVFPFHPWDSKEERKQGVVLWIPKTIEELIETAMDQLKCSSGSCILSENGAKIIDIDMVSDEEKLFLVAE 729
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5AP20 ((Uncharacterized protein {ECO:0000313|EMBL:CAN69248.1}))
HSP 1 Score: 926.776 bits (2394), Expect = 0.000e+0
Identity = 438/655 (66.87%), Postives = 540/655 (82.44%), Query Frame = 0
Match: A5AP20 ((Uncharacterized protein {ECO:0000313|EMBL:CAN69248.1}))
HSP 1 Score: 926.776 bits (2394), Expect = 0.000e+0
Identity = 438/655 (66.87%), Postives = 540/655 (82.44%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKL---GGTEGEFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNC---LKGFQDVQRKCTVFPFHSWD-HQERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSDN 651
+Q GRKEPVRYLLWIRLSRA+RVTE FEKLEKDIR+NYLFTRI+KL VVELYCTH AACIFYYLATT+P +QEGYTWIGSLKMGDY+YSHFRDIDLW RY TSLYFAIVTMATVGYGD+HAVN REM+F+M +VS DMILGAYLLGNM ALIVKGSKTEKFRD+M++L+ YMNR KLG+QI NEIK H++SQY S TEAA+LQDIP+S RA+IS++LY PYI +V +FKGCS GF+KQIA++VHEE FLPGEVI E+G+ +DQLYIVC+GKL G E E E P+ LQ++ S GE+S+LCN YTVQV+E +L+RLDKQSF+N+L++YFSDGR +NNLLEGK + L+NKILESDI L+IG+ E+E+AM++NCAA+ GDL +L+RL+ AGAD + TDY+GRSPLH AASKG EDI +L++ + ++DN+GNTPL EAIK+ H+ V SLLVK+GA L + AGNCLCM VVR D ++L++++ G NPN+KNYD RTPLHLA+S+GLY++ ++LL+AGASV AKDRWGNTPLDEARIGGNK LI+LLE A QL +F +C ++ + QRKCTVFPFH WD +ER+ GVVLWIP+ IEELIE A QLK I++E+G KI+D+ M+ D +KLFLV++
Sbjct: 179 YQFCGRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRINYLFTRIVKLLVVELYCTHAAACIFYYLATTMPASQEGYTWIGSLKMGDYSYSHFRDIDLWKRYFTSLYFAIVTMATVGYGDIHAVNVREMLFVMAYVSFDMILGAYLLGNMTALIVKGSKTEKFRDRMAELISYMNRNKLGRQISNEIKHHMRSQYETSYTEAALLQDIPVSIRAKISQKLYGPYISKVSLFKGCSPGFLKQIATRVHEEIFLPGEVILEEGNMVDQLYIVCNGKLKGVGSNEDETEGPLIHLQTNDSFGEISLLCNTPQAYTVQVVELCRLVRLDKQSFMNILEIYFSDGRITLNNLLEGKGSNLRNKILESDITLYIGKREAEVAMRVNCAAYNGDLYQLRRLIEAGADPNKTDYNGRSPLHFAASKGYEDITDYLIELRVNIHLSDNFGNTPLLEAIKNGHDGVTSLLVKAGALLTVEGAGNCLCMTVVRRDLNFLKRLLANGINPNAKNYDSRTPLHLAASEGLYSMTNLLLEAGASVLAKDRWGNTPLDEARIGGNKNLIKLLEEAMSAQLSEFSSCSQEIRADKMRQRKCTVFPFHPWDSKEERKQGVVLWIPKTIEELIETAMDQLKCSSGSCILSENGAKIIDIDMVSDEEKLFLVAET 833
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7TC62 ((Uncharacterized protein {ECO:0000313|EMBL:CBI28247.3}))
HSP 1 Score: 925.235 bits (2390), Expect = 0.000e+0
Identity = 439/654 (67.13%), Postives = 539/654 (82.42%), Query Frame = 0
Match: D7TC62 ((Uncharacterized protein {ECO:0000313|EMBL:CBI28247.3}))
HSP 1 Score: 925.235 bits (2390), Expect = 0.000e+0
Identity = 439/654 (67.13%), Postives = 539/654 (82.42%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKL---GGTEGEFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNC---LKGFQDVQRKCTVFPFHSWD-HQERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD 650
++ GRKEPVRYLLWIRLSRA+RVTE FEKLEKDIR+NYLFTRI+KL VVELYCTH AACIFYYLATT+P +QEGYTWIGSL MGDY+YSHFRDIDLW RY TSLYFAIVTMATVG GD+HAVN REM+F+M +VS DMILGAYLLGNM ALIVKGSKTEKFRD+M++L+ YMNR KLG+QI NEIK HV+SQ+ S TEAA LQDIP+S RA+IS++LY PYI+EV +FKGCSSGF+KQIA++VHEE FLPGEVI E+ + +DQLYIVC+GKL G E E E P+ LQ++ S GE+ +LCN L YTVQV+E +L+RLDKQSF+N+L++YFSDG+ I+NNLLEGK + L+NKILESDI L+IG+HE+E+AM++NCAA+ GDL +L+RL+ AGAD + TDYDGRSPLH AASKG EDI FL++ + ++DN+GNTPL EAIK+ H+ V SLLVK+GA L + DAG CLCM VVR D ++L++++ G NPN+KNYD RTPLHLA+S+GLY++ ++LL+AGASV AKDRWGNTPLDEARIGGNK LI+LLE A QL +F +C ++ + QRKCTVFPFH WD +ER+ GVVLWIP+ IEELIE A QLK I++E+G KI ++ MI D +KLFLV++
Sbjct: 181 YRFCGRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRINYLFTRIVKLLVVELYCTHAAACIFYYLATTMPASQEGYTWIGSLTMGDYSYSHFRDIDLWKRYFTSLYFAIVTMATVGSGDIHAVNVREMLFVMAYVSFDMILGAYLLGNMTALIVKGSKTEKFRDRMAELISYMNRNKLGRQISNEIKHHVRSQHETSYTEAAFLQDIPVSIRAKISQKLYGPYIKEVSLFKGCSSGFLKQIATRVHEEIFLPGEVILEEENMVDQLYIVCNGKLKRVGSNEDEIEGPLMHLQTNDSFGEIPLLCNTPLAYTVQVVELCRLVRLDKQSFINILEIYFSDGQIILNNLLEGKGSNLRNKILESDITLYIGKHEAEVAMRVNCAAYNGDLYQLRRLIEAGADPNKTDYDGRSPLHFAASKGYEDITDFLIELRVNIHLSDNHGNTPLLEAIKNGHDGVTSLLVKAGALLTVEDAGGCLCMTVVRRDLNFLKRLLANGINPNAKNYDSRTPLHLAASEGLYSMTNLLLEAGASVLAKDRWGNTPLDEARIGGNKNLIKLLEEAMSAQLSEFSSCSQEIRADKMRQRKCTVFPFHPWDSKEERKQGVVLWIPKTIEELIETAMDQLKCSSGSCILSENGAKITNIDMISDEEKLFLVAE 834
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6RTW2 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8125868.1}))
HSP 1 Score: 901.353 bits (2328), Expect = 0.000e+0
Identity = 435/654 (66.51%), Postives = 537/654 (82.11%), Query Frame = 0
HSP 2 Score: 437.573 bits (1124), Expect = 1.872e-135
Identity = 215/385 (55.84%), Postives = 284/385 (73.77%), Query Frame = 0
Match: A0A5N6RTW2 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8125868.1}))
HSP 1 Score: 901.353 bits (2328), Expect = 0.000e+0
Identity = 435/654 (66.51%), Postives = 537/654 (82.11%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHG---KLGGTE-GEFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQDVQRK--CTVFPFHSWD-HQERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD 650
++ASGRKEPVRYLLWIRLSRA+RVTE FEKLEKDIR++YL TRI+KLFVVELYCTHTAACIFYYLATTLPP++EGYTWIGSLKMGDY+YSHFR+IDLW RY+TSLYFAIVTMAT+GYG++HAVN REMIFIMI+VS DMILGAYLLGNMAALIVKGSKTEKFRDKM+DL++YMN+ KL +Q EIKGH++ QY S TE A+LQD+P S R +IS+ LY PY+RE IFKGCSSGF+KQIA KV EE FLPGEVI EQG+ +DQLYI+CHG ++G E E EE V LQ+HSS GE+S LCN YTVQV E S++LRLDKQ F +L++ FSDGR I+NNLLEGK + +++KILES+I LHI ESELAMK+NCAA+ GD R+KRL+ AG D +NTDY+GRSPLH+AASKG EDI FL+ + ++I+D +GNTPL EAIK+ H+ VAS LVK+GA+L+I +AG+ LCM + R D D L++++ G +PN+KNYDLRTPLHLA+S+GLY +A +LL+AGASV +KDRWGNTPLD+A IGGNK L++LLE A+ QL + +C + +D R+ CTVFPFH WD +ERR GVVLW+PQ+I+ELI+AAK+QLK I++E+GGKILD+ M+ + QKL+LV +
Sbjct: 574 YKASGRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRLHYLGTRIVKLFVVELYCTHTAACIFYYLATTLPPSEEGYTWIGSLKMGDYSYSHFREIDLWKRYVTSLYFAIVTMATLGYGEIHAVNVREMIFIMIYVSFDMILGAYLLGNMAALIVKGSKTEKFRDKMADLIKYMNKHKLDRQTSKEIKGHLRLQYERSNTEVALLQDVPASIRTKISQNLYEPYVREASIFKGCSSGFIKQIAIKVQEEFFLPGEVIIEQGNVIDQLYIICHGEVDEIGKVEDDETEEYVMCLQAHSSFGEVSFLCNTPQTYTVQVRELSRVLRLDKQCFKEVLEICFSDGRIIVNNLLEGKDSNVRSKILESEITLHIEHRESELAMKINCAAYDGDSYRVKRLIKAGVDPNNTDYNGRSPLHIAASKGYEDIAVFLIGQGVGINISDKFGNTPLLEAIKNGHDQVASSLVKAGAALNIDNAGDFLCMTIARRDLDLLKRILANGIHPNAKNYDLRTPLHLAASEGLYTVAELLLEAGASVLSKDRWGNTPLDDACIGGNKNLMKLLEVARTSQLSELSDCSQRIRDEMREKTCTVFPFHPWDPEEERREGVVLWVPQSIQELIKAAKEQLKCSSGTCILSENGGKILDINMVTNNQKLYLVGE 1227
HSP 2 Score: 437.573 bits (1124), Expect = 1.872e-135
Identity = 215/385 (55.84%), Postives = 284/385 (73.77%), Query Frame = 0
Query: 291 LQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQDV--------------------QRKCTVFPFHSWD-HQERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSDNSET 654
LQ+HSS GE+S LCN YT++V E S++LRLD Q F +L++ FSDGR I+NNLLEGK + L+ KILESDI L+I + ESELAMK+NCAA+ GD R+KRL+ AGAD + TDY+GRSPLH+AA KG EDI FL++ ++I+D GNTPL EAIK+ H+ VASLLVK+GA+L+I +AG+ LCM + R D D L++++ G NPN+KNYDLRTPLHLA+S+G Y++ +LL+AGASV +KDRWGNTPLD+A IGGNK LI+LLE A+ QL + +C +G +DV ++ CTVFPFH WD +ERR GVVLW+PQ+I+ELI+AAK+QLK I++E+GGKILD+ M+ + QKL+LV + E
Sbjct: 3 LQAHSSFGEVSFLCNAPQTYTIRVCELSRVLRLDIQCFKEILEICFSDGRIIMNNLLEGKDSNLRRKILESDITLYIEKRESELAMKVNCAAYDGDSYRVKRLITAGADPNKTDYNGRSPLHIAACKGYEDIALFLIEHGVSINISDMLGNTPLLEAIKNGHDQVASLLVKAGAALNIDNAGDFLCMTIARRDLDLLKRILANGINPNAKNYDLRTPLHLAASEGFYSVTELLLEAGASVLSKDRWGNTPLDDACIGGNKNLIKLLEVARTSQLSELSDCSQGIRDVYPSTLSELTTFPLASTDEMRRKTCTVFPFHPWDPKEERREGVVLWVPQSIQELIKAAKEQLKCSSGTCILSENGGKILDINMVTNDQKLYLVGEGREA 387
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7FQ84 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc03g097940.3.1}))
HSP 1 Score: 900.197 bits (2325), Expect = 0.000e+0
Identity = 437/654 (66.82%), Postives = 532/654 (81.35%), Query Frame = 0
Match: A0A3Q7FQ84 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc03g097940.3.1}))
HSP 1 Score: 900.197 bits (2325), Expect = 0.000e+0
Identity = 437/654 (66.82%), Postives = 532/654 (81.35%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKL----GGTEGEFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQDVQR--KCTVFPFHSWD-HQERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD 650
++ASGRKEPVRY+LWIRLSRA+RVTELFE+LEKDIR+NYLFTRI+KLFVVELYCTHTAAC FYYLATTLPP +EGYTWIGSLKMGDYNY+ FRDIDLWTRYITSLYFA+VTMATVGYG++HAVN REMIF+MI+VS+DMILGAYLLGNMAALIVKGSKTE+FRDKM+DL++YMNR KLGK + EIK HV+ QY + E++VLQDIP S RA+I+ +LY PYIR VP+F+GCS F++QIA KVHEE FLPGEVI EQG DQLY VCHGK+ E E EE + L +++S+GE+SVLCNI +PYTVQV E S+LLR+DKQS + +L +YFSDGR IINNLLEG+ + L++KILESDI L+I +HESELAM+LNCAA GDL RL RL+ AGA+ + TDYDGRSPLHLAAS+G+ DI FL+Q+ ++ DN+G TPL EA+K+SH+ VASLLV++GA L I + G CLC AV R D +YLR+++ G NPNSKNYD RTPLHLA+S+GLY I+ +LL+AGASVFA DRWG +PLDEAR+GGNK LI+LLE+AK QL +F QD + KC VF + ERR GVVLW+PQ+++ELI AK+QL++ + +++EDG KILD MI DGQKLFLVS+
Sbjct: 31 YKASGRKEPVRYILWIRLSRALRVTELFERLEKDIRLNYLFTRIVKLFVVELYCTHTAACFFYYLATTLPPWEEGYTWIGSLKMGDYNYTDFRDIDLWTRYITSLYFAVVTMATVGYGEIHAVNVREMIFVMIYVSVDMILGAYLLGNMAALIVKGSKTERFRDKMADLIKYMNRNKLGKSLSKEIKDHVRLQYESRYNESSVLQDIPASIRAKIARKLYEPYIRGVPLFRGCSDEFIEQIAIKVHEEFFLPGEVILEQGSMADQLYFVCHGKVEELTKSEENETEESLLDLHTYNSVGEISVLCNIPVPYTVQVSELSRLLRIDKQSLVEILGIYFSDGRVIINNLLEGRESSLRSKILESDITLNIAKHESELAMRLNCAAHDGDLYRLSRLIGAGAEPNRTDYDGRSPLHLAASRGHGDITAFLIQRGVEINGRDNFGYTPLLEAVKNSHDHVASLLVEAGALLGIDNDGTCLCEAVARRDVEYLRRLLANGINPNSKNYDFRTPLHLAASEGLYPISVLLLEAGASVFAVDRWGKSPLDEARVGGNKNLIKLLEDAKGSQLSEFSPSFGRSQDEGQGVKCRVFASEPKELKDERRKGVVLWVPQSLDELINTAKEQLRVSSANCVVSEDGAKILDTNMISDGQKLFLVSE 684
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2C9VLH1 ((Uncharacterized protein {ECO:0000313|EMBL:OAY46472.1}))
HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0
Identity = 433/659 (65.71%), Postives = 535/659 (81.18%), Query Frame = 0
Match: A0A2C9VLH1 ((Uncharacterized protein {ECO:0000313|EMBL:OAY46472.1}))
HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0
Identity = 433/659 (65.71%), Postives = 535/659 (81.18%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKLG----GTEG--EFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQDV----QRKCTVFPFHSWDHQE-RRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSDN 651
++A GRKE RY+LWIRLSRA RV+E FE+LEKDIR+NYLFTRI+KL VVELYCTHTAACIFYYLATTLPP++EGYTWIGSL+MGDY+YSHFRDIDLW RYITSLYFAIVTMATVGYG++HAVN REMIF+M++VS DMILGAYLLGNM ALIVKGSKTEKFRDKM++L++YMNR LGK I NEIKGH++ Q+ S TEAAVLQDIP S RA+IS++LY PYI+EV +FKGCS GF+KQIA KVHEE FLPGEVI EQG +DQLY VCHG+L G EG E EEP+ LQ++SS GE+S LCN P+TV+V E ++LRLDK+SF +L++YFSDGR I+NNLLEGK + LQN++LESD+ LHI + ES LA +LNCAA+ GD RLKRL+ AGAD + TDYDGRSPLH+AA+KG+EDI FL+++ V+I+D +GNTPL E++K H+ V S LV++GA+L+I DAG LCMAV R D L++ + G NPN+KN+D RTPLH+A+S+GLY +A +LL+AGASVF+KDRWGNTPLDEAR+GGNK I L E A+ Q+ + +C G Q V +RKCTV+PFH WD E RR GVVLW+P+ +EE+++AA +QL SC I++E+GGKI+D+ MI D QKLFLVS++
Sbjct: 174 YKACGRKEAARYMLWIRLSRARRVSEFFERLEKDIRINYLFTRIVKLLVVELYCTHTAACIFYYLATTLPPSEEGYTWIGSLQMGDYHYSHFRDIDLWKRYITSLYFAIVTMATVGYGEIHAVNVREMIFVMVYVSFDMILGAYLLGNMTALIVKGSKTEKFRDKMAELIKYMNRNNLGKGISNEIKGHLRLQFDRSYTEAAVLQDIPSSLRAKISQKLYEPYIKEVHLFKGCSLGFIKQIAIKVHEEFFLPGEVIIEQGQIVDQLYFVCHGELVKEELGKEGNDETEEPM-CLQAYSSFGEISFLCNTPQPHTVRVRELCRVLRLDKRSFTEILEIYFSDGRTILNNLLEGKDSNLQNELLESDVTLHIEKSESVLATRLNCAAYDGDFYRLKRLIGAGADPNKTDYDGRSPLHVAATKGHEDITLFLIEQGVDVNISDKFGNTPLLESVKGGHDEVGSALVRAGATLEIDDAGGFLCMAVARRDLGLLKRALANGMNPNAKNFDCRTPLHVAASEGLYPMAKLLLEAGASVFSKDRWGNTPLDEARLGGNKNFINLFETARTSQISELSDCHGGIQAVAEKQRRKCTVYPFHPWDPTEKRREGVVLWVPETMEEIVKAAMEQLNCTSSC-ILSENGGKIIDVNMINDNQKLFLVSES 830
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IKB5 ((Potassium channel skor {ECO:0000313|EMBL:OIT04724.1}))
HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0
Identity = 431/659 (65.40%), Postives = 531/659 (80.58%), Query Frame = 0
Match: A0A1J6IKB5 ((Potassium channel skor {ECO:0000313|EMBL:OIT04724.1}))
HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0
Identity = 431/659 (65.40%), Postives = 531/659 (80.58%), Query Frame = 0
Query: 1 MYSFQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKLGGT----EGEFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQDVQR-KCTVFPFHSWDHQERRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSDNSET 654
+Y+ A GRKEPVRYLLWIRLSRA+RVTE FEKLEKDIR+NYLFTRI+KL VVE+YCTHTAACIFYYLATTLPP +EGYTWIGSLKMGDY+Y+HFRDIDLWTRYITSLYFAIVTMATVGYG++HAVN +EMIF+MI+VS DMILGAYLLGNMAALIVKGSKTEKFRDKM+DL++YMNR +LGK+I EIK HV+ QY + E++VLQDIP S RA+IS++LY PYIR VP+F+GCS F+KQIA KVHEE FLPGEVI EQG DQLY VCHGK+ E E EE + L +++S+GE+SVLCNI +PYTVQV E S+LLR+DKQS + +L + FSDGR IINNLLEG+ + L++KIL+SDI L+I +HESEL M+LNCAA GDL RL R++ AGAD S TDYDGRSPLHLAASKG+ DI FL+Q+ ++ D +G+T L EA+K+ H+ VASLL+++GA L I + G CLC AV + D DYLR++++ G NPNSKNYD RTPLHLA+S+GL+ I+ +LL+AGASVFA DRWG TPLDEAR+GGNK LI+LLE+A+ QL +F + QR +CTVF D ++ R VVLW+PQ+++ELI AK QL++ + +++EDG KILD MI DGQKLFLV +++ +
Sbjct: 9 IYAIGACGRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRLNYLFTRIVKLLVVEVYCTHTAACIFYYLATTLPPWEEGYTWIGSLKMGDYSYAHFRDIDLWTRYITSLYFAIVTMATVGYGEIHAVNTKEMIFVMIYVSFDMILGAYLLGNMAALIVKGSKTEKFRDKMADLIKYMNRNRLGKRISKEIKDHVRLQYESRYNESSVLQDIPASIRAKISQKLYEPYIRGVPLFRGCSHEFIKQIAIKVHEEFFLPGEVIIEQGSMADQLYFVCHGKVEEVRKPEENETEESLLDLHTYNSVGEISVLCNIPVPYTVQVYELSRLLRIDKQSLVEILGICFSDGRVIINNLLEGRESSLRSKILDSDITLNIAKHESELTMRLNCAAHDGDLYRLSRIIGAGADPSRTDYDGRSPLHLAASKGHGDITVFLIQRGVEINARDKFGSTALLEAVKNGHDHVASLLMEAGALLGIDNDGTCLCEAVAKRDLDYLRRLLDSGINPNSKNYDFRTPLHLAASEGLFPISVLLLEAGASVFAVDRWGRTPLDEARVGGNKNLIKLLEDAQGSQLSEFSTSFGKQDEGQRVRCTVFSSDPRDLKDERRRVVLWVPQSLDELINTAKAQLRVSSANCVVSEDGAKILDTDMISDGQKLFLVRESTRS 667
BLAST of DCAR_011386 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2C9VLK9 ((Uncharacterized protein {ECO:0000313|EMBL:OAY46473.1}))
HSP 1 Score: 894.419 bits (2310), Expect = 0.000e+0
Identity = 432/658 (65.65%), Postives = 534/658 (81.16%), Query Frame = 0
Match: A0A2C9VLK9 ((Uncharacterized protein {ECO:0000313|EMBL:OAY46473.1}))
HSP 1 Score: 894.419 bits (2310), Expect = 0.000e+0
Identity = 432/658 (65.65%), Postives = 534/658 (81.16%), Query Frame = 0
Query: 4 FQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKLFVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDLWTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLGNMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANSCTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHEETFLPGEVIAEQGDFMDQLYIVCHGKLG----GTEG--EFEEPVHFLQSHSSLGEMSVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGKTTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADTSNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKHSHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSKNYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNKTLIQLLENAKHDQLLKFPNCLKGFQDVQ---RKCTVFPFHSWDHQE-RRLGVVLWIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSDN 651
++A GRKE RY+LWIRLSRA RV+E FE+LEKDIR+NYLFTRI+KL VVELYCTHTAACIFYYLATTLPP++EGYTWIGSL+MGDY+YSHFRDIDLW RYITSLYFAIVTMATVGYG++HAVN REMIF+M++VS DMILGAYLLGNM ALIVKGSKTEKFRDKM++L++YMNR LGK I NEIKGH++ Q+ S TEAAVLQDIP S RA+IS++LY PYI+EV +FKGCS GF+KQIA KVHEE FLPGEVI EQG +DQLY VCHG+L G EG E EEP+ LQ++SS GE+S LCN P+TV+V E ++LRLDK+SF +L++YFSDGR I+NNLLEGK + LQN++LESD+ LHI + ES LA +LNCAA+ GD RLKRL+ AGAD + TDYDGRSPLH+AA+KG+EDI FL+++ V+I+D +GNTPL E++K H+ V S LV++GA+L+I DAG LCMAV R D L++ + G NPN+KN+D RTPLH+A+S+GLY +A +LL+AGASVF+KDRWGNTPLDEAR+GGNK I L E A+ Q+ + +C G Q + RKCTV+PFH WD E RR GVVLW+P+ +EE+++AA +QL SC I++E+GGKI+D+ MI D QKLFLVS++
Sbjct: 174 YKACGRKEAARYMLWIRLSRARRVSEFFERLEKDIRINYLFTRIVKLLVVELYCTHTAACIFYYLATTLPPSEEGYTWIGSLQMGDYHYSHFRDIDLWKRYITSLYFAIVTMATVGYGEIHAVNVREMIFVMVYVSFDMILGAYLLGNMTALIVKGSKTEKFRDKMAELIKYMNRNNLGKGISNEIKGHLRLQFDRSYTEAAVLQDIPSSLRAKISQKLYEPYIKEVHLFKGCSLGFIKQIAIKVHEEFFLPGEVIIEQGQIVDQLYFVCHGELVKEELGKEGNDETEEPM-CLQAYSSFGEISFLCNTPQPHTVRVRELCRVLRLDKRSFTEILEIYFSDGRTILNNLLEGKDSNLQNELLESDVTLHIEKSESVLATRLNCAAYDGDFYRLKRLIGAGADPNKTDYDGRSPLHVAATKGHEDITLFLIEQGVDVNISDKFGNTPLLESVKGGHDEVGSALVRAGATLEIDDAGGFLCMAVARRDLGLLKRALANGMNPNAKNFDCRTPLHVAASEGLYPMAKLLLEAGASVFSKDRWGNTPLDEARLGGNKNFINLFETARTSQISELSDCHGGIQVAEKQRRKCTVYPFHPWDPTEKRREGVVLWVPETMEEIVKAAMEQLNCTSSC-ILSENGGKIIDVNMINDNQKLFLVSES 829
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7CAK4 | E-Value: 0.000e+0, PID: 69.88 | (Putative potassium channel SKOR-like {ECO:0000313... [more] |
| A0A5J5BE44 | E-Value: 0.000e+0, PID: 69.88 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8541... [more] |
| F6GSP6 | E-Value: 0.000e+0, PID: 66.82 | (Uncharacterized protein {ECO:0000313|EMBL:CCB4330... [more] |
| A5AP20 | E-Value: 0.000e+0, PID: 66.87 | (Uncharacterized protein {ECO:0000313|EMBL:CAN6924... [more] |
| D7TC62 | E-Value: 0.000e+0, PID: 67.13 | (Uncharacterized protein {ECO:0000313|EMBL:CBI2824... [more] |
| A0A5N6RTW2 | E-Value: 1.872e-135, PID: 66.51 | (Uncharacterized protein {ECO:0000313|EMBL:KAE8125... [more] |
| A0A3Q7FQ84 | E-Value: 0.000e+0, PID: 66.82 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A2C9VLH1 | E-Value: 0.000e+0, PID: 65.71 | (Uncharacterized protein {ECO:0000313|EMBL:OAY4647... [more] |
| A0A1J6IKB5 | E-Value: 0.000e+0, PID: 65.40 | (Potassium channel skor {ECO:0000313|EMBL:OIT04724... [more] |
| A0A2C9VLK9 | E-Value: 0.000e+0, PID: 65.65 | (Uncharacterized protein {ECO:0000313|EMBL:OAY4647... [more] |
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An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |