Resource Type:
Polypeptide
Name:
XM_017367671.1
Identifier:
XM_017367671.1-protein
Sequence:
MLSRRLVISSEKNMRGSLSSVTPASRKLSLVFMVIYTLLLFLSSSGCKAV
SSSSSSSCGNIQNISCPFTLKGDDQQCDSSFFTLELSCLKNRTILYLLED
KIFYVKSIDYDNLLVRIVDPGLENNNSSIKEDDFLALDQGYKLRKVNQPI
TMMECPSPVISTRYINITSPNSSFSSSVLGKYYVYSYAYIVVGYVDITEM
EDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLK
CHDGCDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQIL
KRMFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRY
AYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEF
INEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGS
EEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNF
NPIISDFGLAKSYATNDSTVTLNARGTMGYMAPEMFYKNIGGISYKADVY
SFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEE
ERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHP
QEDPAEINNSIHTEE
Sequence Length:
665
Sequence Checksum:
da155fe3dc2e9eb4705b490ea7a30c64
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367671.1, derives from mRNA, XM_017367671.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ALL0 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0
Identity = 358/647 (55.33%), Postives = 443/647 (68.47%), Query Frame = 0
Match: A0A5B7ALL0 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0
Identity = 358/647 (55.33%), Postives = 443/647 (68.47%), Query Frame = 0
Query: 56 SSCGNIQNISCPFTLKGDDQQCDSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENNNSS------IKEDDFLALDQGYKLRKVNQPITMMECPSPVISTRYINIT--SPNSSFSSSVLGKY-------------YVYSYAYIVVG-YVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKCHDGCDTSSP-------DHHLWACI-SFSTPCNLPDGSSYHITLLCMPHNLR--------------VTVQILKRMFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGD-VEELVMPPKPFRHPQEDPAE 656
SSCGNI NIS PF LKGD Q D S + EL+C NRT+L L + FYV++I Y+N +R+VDPGL+ +N S + DF L N P+ + C + V ST Y++ S N+S S+S L + +++Y+V G ++++ED+C I AW S + ++ S+IHD L+YG+++ W Y KC D C+ S DHH I C + SS +LC+ LR Q + +FLAARFS G+PF+LA L YK RRRHLSMY+TIEDFLQ+ NNL+PIRYA+SDIKK+TN F DKLGEGG+GTVYKGKLRSG+LVAVK++G+SKATG+EFINEV T GRIHHVNVV+L+GFC EG K AL+Y+FMPNGSLEKYIF EE +SLS +KMYEIS VA GI YLHRGC++QILHFDIKPHNILLD+NF P +SDFGLAK Y T+DS V+L ARGTMGYMAPE+FYKNIGG+SYKADVYSFGMLLM+MA +R+NLN DH SQI+FPSWVYDQF++GK++EM D EEERK+VKKMIIVALWCIQMKP +RPSM++ I+MLE + VE+L MPPKPF PQE PAE
Sbjct: 44 SSCGNIHNISYPFRLKGDPQN-DCSHPSYELACENNRTVLSLYDYGKFYVEAITYENYSIRVVDPGLDKDNCSSFPLHSLNYYDF-PYTTYSYLYSYNDPLVFISCTAHVNSTLYVDTAFCSKNTSSSNSALSSLQKTTSSSNYSTLSSLQNHSYVVSGDMFRLSDLEDSCTIGVTAWASSQGQSPREIIGSNSLSDIHDRLLYGFELSW---YNAKCGD-CEARSGICYQITIDHHNNTIICEIQNYCKFSNSSSSVRPMLCIRQILRGIRNGIRDNWMYDRKADQNIMGLFLAARFSCGIPFMLALLVYKFRRRHLSMYDTIEDFLQSHNNLVPIRYAFSDIKKMTNGFKDKLGEGGYGTVYKGKLRSGILVAVKMMGKSKATGQEFINEVGTIGRIHHVNVVQLIGFCAEGSKRALVYDFMPNGSLEKYIFPR---EEGTLSLSCEKMYEISLGVARGIHYLHRGCNMQILHFDIKPHNILLDQNFTPKVSDFGLAKLYPTDDSIVSLTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGRRKNLNAFADHFSQIYFPSWVYDQFNEGKDIEMGDATEEERKMVKKMIIVALWCIQMKPGDRPSMHEVIDMLEAENVEQLQMPPKPFLTPQEMPAE 681
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZIG0 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 648.277 bits (1671), Expect = 0.000e+0
Identity = 356/674 (52.82%), Postives = 458/674 (67.95%), Query Frame = 0
Match: A0A5J4ZIG0 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 648.277 bits (1671), Expect = 0.000e+0
Identity = 356/674 (52.82%), Postives = 458/674 (67.95%), Query Frame = 0
Query: 31 VFMVIYTLLLFLSSSGCKAVSS--SSSSSCGNIQNISCPFTLKGDDQQCDSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENNNSSIKEDDFLAL---------DQGYK-LRKVNQPITMMECPSPVISTRYINIT--SPNSSFSSSV----------LGKYYVYSYAYIVVGYVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKCHDGCDTSSPDHHLWA---CISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILK-----------------------RMFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIF-RNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQE 652
+F + LL L S C A + +SSCGNI NIS PF L D Q C F ELSC NRTIL L K + V++I Y+N +R+VDPGL+ +N S FL+L D Y+ + N+PIT + C +PV S Y + S N+S++S++ + +++Y+V G + I++ME++C I VA VS ++FS+IH+ LVYG+++ W Y + C D C+ + +L + + PCN SY + L + H ++ +Q + +FLAAR G+P +LA L YK RRRHLSMY+ IEDFLQ+ N LMPIRYA+SDIKK+TNNF DKLGEGG+GTVYKGKLRSG+LVAVK++G+SKATG+EFINEV T GRIHHVNVV+L+GFC EG K AL+Y+FMPNGSLEKYIF R +GS +SLSW+KMYEIS VA GI YLHRGCD+QILHFDIKPHNILLD+NFNP +SDFGLAK Y T ++TV++ ARGTMGYMAPE+FYKNIGG+SYKADVYSFGMLLM+MA +R+NLN +D +SQI+FPSWVY+Q ++GK++E+ D EEERK VKKMIIVALWCIQMKPS+RPSM + I+MLEG+VE+L MPPKPF +P++
Sbjct: 7 LFAGLTASLLVLFSLTCTAEENHRCEASSCGNIHNISYPFRLISDPQNCGHPSF--ELSCESNRTILSLSSGK-YNVEAITYENYSIRVVDPGLDKDNCSPFPLHFLSLFYPSKDVSGDSLYRGWYRYNEPITFISCAAPVNSPLYFDTAFCSKNTSYNSALSSLQKNTSSSSTLSSMQNHSYVVSGDMLISDMEESCTIGNVALVSLQIQSHGAIIGSNSFSDIHNRLVYGFELSW---YQVYCKDRCNATGGFCYLDSNNKIRCWGDPCN-----SYKLHLSAV-HPMQGPLQAPRFLCGIPSYYGIVTTFTGLFLACTGLFLAARLLCGIPLMLALLFYKFRRRHLSMYDIIEDFLQSHNKLMPIRYAFSDIKKMTNNFKDKLGEGGYGTVYKGKLRSGILVAVKMMGKSKATGQEFINEVGTIGRIHHVNVVQLIGFCAEGSKRALVYDFMPNGSLEKYIFPREEGS---TLSLSWEKMYEISLGVARGIQYLHRGCDMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPTEENTVSVTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGRRKNLNAFVDRLSQIYFPSWVYNQVNEGKDIEVGDATEEERKTVKKMIIVALWCIQMKPSDRPSMNEVIDMLEGNVEQLQMPPKPFLNPRD 665
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WEK7 ((rust resistance kinase Lr10-like isoform X2 {ECO:0000313|RefSeq:XP_027113853.1}))
HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0
Identity = 335/653 (51.30%), Postives = 447/653 (68.45%), Query Frame = 0
Match: A0A6P6WEK7 ((rust resistance kinase Lr10-like isoform X2 {ECO:0000313|RefSeq:XP_027113853.1}))
HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0
Identity = 335/653 (51.30%), Postives = 447/653 (68.45%), Query Frame = 0
Query: 27 KLSLVFMVIYTLLLFLSSSGCKAVSS--SSSSSCGNIQNISCPFTLKGDDQQC-DSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENNNSSIKEDDFLALDQ---------GYKLRKV---NQPITMMECPSPVISTRYINITS-----PNSSFSSSVLGKYYVYSYAYIVVGYVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKCHDGCDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILKR---MFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPA 655
KLS+ +++ L+ ++ C+A ++ + SSCG+I+NIS PF LK D C D S+ EL+C NRTI+ L K +YV+ I Y+N L+R+VDPGL+ N S + L D+ GY L + N P+ + CP+PV S + +I + S+FSS +++Y++ G +++ + D+C ++ AWV++ F K +++ + ++DAL YG+ + W YC +C G + + C + PC L ++ T C+ V+ L + M LA RF LG+PFL A + YK RR HLSMY IEDFLQ+ NNLMP+RYAYSDI+K+TNNF +KLGEGG+GTV+KGKLRSG LVAVK+LG+SKA G+EFI+EVAT GRIHH NVV L+GFCFEG K AL+YEFMPNGSLEKYIFR E E SLS +K+++I+ +A GIDYLH GCD+QILHFDIKPHN+LLD++F P +SDFGLAK Y T +S V+L ARGT+GYMAPE++YKNIGG+SYKAD+YSFGM L++MA +R+NLNP++D SQI+FPSWVYDQ S G +E+ D +E+ERK+ KKMI++ALWCIQMKP RPSM K IEMLEGD E L MPPKPF++P E PA
Sbjct: 5 KLSIASLIVLVLVSVGLATSCEATNNHHCNPSSCGDIRNISYPFRLKEDPIHCGDPSY---ELACENNRTIVNLFLQK-YYVQEIIYENYLMRVVDPGLDKANCSSFPINTLEYDELQMADNPQDGYTLYDIFYTNIPVLFISCPAPVRSPFFSDIMAFCRNHMPSNFSSPT------NNHSYLLFGDHEVSVLNDSCAVNMAAWVTKD--FGG-RKAYTSPAGLYDALAYGFLLDWRGIYCQQCSSGSCYRYVNGSI-RCSAVYMPCELLHPHTFRPTFECLKEIWYQKVEFLGQYPGMCLAGRFLLGVPFLFALIIYKIRRSHLSMYENIEDFLQSPNNLMPVRYAYSDIRKMTNNFNEKLGEGGYGTVFKGKLRSGPLVAVKMLGKSKANGQEFISEVATIGRIHHANVVRLIGFCFEGSKRALVYEFMPNGSLEKYIFR---KETETTSLSCEKLFDIALAIAKGIDYLHSGCDMQILHFDIKPHNVLLDEHFAPKLSDFGLAKLYPTENSIVSLTAARGTLGYMAPELYYKNIGGVSYKADIYSFGMRLLEMAGKRKNLNPLVDQRSQIYFPSWVYDQLSKGNSIEVGDASEDERKMFKKMILIALWCIQMKPINRPSMNKVIEMLEGDGELLEMPPKPFQNPDEMPA 640
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7WNX9 ((probable receptor-like protein kinase At1g67000 {ECO:0000313|RefSeq:XP_009780293.1}))
HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 334/651 (51.31%), Postives = 446/651 (68.51%), Query Frame = 0
Match: A0A1U7WNX9 ((probable receptor-like protein kinase At1g67000 {ECO:0000313|RefSeq:XP_009780293.1}))
HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 334/651 (51.31%), Postives = 446/651 (68.51%), Query Frame = 0
Query: 24 ASRKLSLVFMVIYTLLLFLSSSGCKAVS-SSSSSSCGNIQNISCPFTLKGDDQQCDSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENN--NSSIKEDDFLALDQG---YKLRKVNQPITMMECPSPVISTRYINITSPNSSFSSSVLGKYYVYSYAYIVVGY-VDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWS-YFYCLKCHDGCDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILKRMFLAA----RFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLNA-RGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPAEINNSI 661
A R+L L +V LL+ S++ KA + + +SSCG+I NI+ PF LK D + C +S F +L C NRT++ L E + + V I+YD L+R +DPGL N N + F G + +N PI + C + V S+RY+ T S ++S Y S++Y+ +G + I+++ ++C + VAW S +S ++ S I DAL YG ++ W F C +C D C + D+ C + DGS + + L C H V I +AA RF GL FL+A + Y+ RRRHLSMY +IEDFLQ Q+NL+PI+Y+YS+IKK+TN F +KLGEG +GTV+KGKLRSG VAVKI+ +S +G+EFI+EV+T GRIHHVNVV+L+GFC EG K AL+Y+FMPN SL+KYIF +G IVSLS+K+M+EIS VA GIDYLHRGCD+QILHFDIKPHNILLD+NFNP ISDFGLAK Y T+DS VTL A RGT+GYMAPE+FYKNIGG+SYKADVYS+GMLLM+MA +R+N+NP DH+SQI+FP+WVYDQF++G ++EM+D +EE+RK+VKK+I VALWCIQMKP +RP+M K +EMLEGDV+ L MPP+PF P+E ++ +I
Sbjct: 3 AVRQLQLATLV---LLVICSTTISKAQNITQCTSSCGDIHNITFPFRLKADPKNCGNSRF--QLDCQNNRTVISL-ESRTYNVLEINYDKFLIRAIDPGLLNQTTNCTFSPKYFTTAVPGTSTFNDLALNIPIIYVNCLAMVNSSRYVETTFCGSQNNTSFFN--YSQSHSYVAIGEDMSISDLAESCSVEIVAWASARG----LSGNNTSLSSIQDALSYGSELSWKRTFLCRECQDYCFSEGNDYR---CSRNNRHLRCDDGSPFDLPLPCSIHLHGVLTIIFGGFGIAAILSFRFLFGLVFLVALIVYRWRRRHLSMYQSIEDFLQIQSNLVPIKYSYSEIKKMTNKFKEKLGEGAYGTVFKGKLRSGPFVAVKIMHKSMTSGEEFISEVSTIGRIHHVNVVQLIGFCVEGSKRALVYDFMPNSSLDKYIFPQEG----IVSLSYKQMFEISLGVARGIDYLHRGCDMQILHFDIKPHNILLDENFNPRISDFGLAKLYPTDDSIVTLTAARGTVGYMAPELFYKNIGGVSYKADVYSYGMLLMEMAGRRKNMNPFADHLSQIYFPTWVYDQFNEGNDIEMQDASEEDRKMVKKIIFVALWCIQMKPVDRPAMNKVVEMLEGDVQLLQMPPRPFISPREIAGDVIETI 634
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3XGJ5 ((rust resistance kinase Lr10-like {ECO:0000313|RefSeq:XP_016439075.1}))
HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 334/651 (51.31%), Postives = 446/651 (68.51%), Query Frame = 0
Match: A0A1S3XGJ5 ((rust resistance kinase Lr10-like {ECO:0000313|RefSeq:XP_016439075.1}))
HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 334/651 (51.31%), Postives = 446/651 (68.51%), Query Frame = 0
Query: 24 ASRKLSLVFMVIYTLLLFLSSSGCKAVS-SSSSSSCGNIQNISCPFTLKGDDQQCDSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENN--NSSIKEDDFLALDQG---YKLRKVNQPITMMECPSPVISTRYINITSPNSSFSSSVLGKYYVYSYAYIVVGY-VDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWS-YFYCLKCHDGCDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILKRMFLAA----RFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLNA-RGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPAEINNSI 661
A R+L L +V LL+ S++ KA + + +SSCG+I NI+ PF LK D + C +S F +L C NRT++ L E + + V I+YD L+R +DPGL N N + F G + +N PI + C + V S+RY+ T S ++S Y S++Y+ +G + I+++ ++C + VAW S +S ++ S I DAL YG ++ W F C +C D C + D+ C + DGS + + L C H V I +AA RF GL FL+A + Y+ RRRHLSMY +IEDFLQ Q+NL+PI+Y+YS+IKK+TN F +KLGEG +GTV+KGKLRSG VAVKI+ +S +G+EFI+EV+T GRIHHVNVV+L+GFC EG K AL+Y+FMPN SL+KYIF +G IVSLS+K+M+EIS VA GIDYLHRGCD+QILHFDIKPHNILLD+NFNP ISDFGLAK Y T+DS VTL A RGT+GYMAPE+FYKNIGG+SYKADVYS+GMLLM+MA +R+N+NP DH+SQI+FP+WVYDQF++G ++EM+D +EE+RK+VKK+I VALWCIQMKP +RP+M K +EMLEGDV+ L MPP+PF P+E ++ +I
Sbjct: 3 AVRQLQLATLV---LLVICSTTISKAQNITQCTSSCGDIHNITFPFRLKADPKNCGNSRF--QLDCQNNRTVISL-ESRTYNVLEINYDKFLIRAIDPGLLNQTTNCTFSPKYFTTAVPGTSTFNDLALNIPIIYVNCLAMVNSSRYVETTFCGSQNNTSFFN--YSQSHSYVAIGEDMSISDLAESCSVEIVAWASARG----LSGNNTSLSSIQDALSYGSELSWKRTFLCRECQDYCFSEGNDYR---CSRNNRHLRCDDGSPFDLPLPCSIHLHGVLTIIFGGFGIAAILSFRFLFGLVFLVALIVYRWRRRHLSMYQSIEDFLQIQSNLVPIKYSYSEIKKMTNKFKEKLGEGAYGTVFKGKLRSGPFVAVKIMHKSMTSGEEFISEVSTIGRIHHVNVVQLIGFCVEGSKRALVYDFMPNSSLDKYIFPQEG----IVSLSYKQMFEISLGVARGIDYLHRGCDMQILHFDIKPHNILLDENFNPRISDFGLAKLYPTDDSIVTLTAARGTVGYMAPELFYKNIGGVSYKADVYSYGMLLMEMAGRRKNMNPFADHLSQIYFPTWVYDQFNEGNDIEMQDASEEDRKMVKKIIFVALWCIQMKPVDRPAMNKVVEMLEGDVQLLQMPPRPFISPREIAGDVIETI 634
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068VNX9 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 335/644 (52.02%), Postives = 439/644 (68.17%), Query Frame = 0
Match: A0A068VNX9 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 335/644 (52.02%), Postives = 439/644 (68.17%), Query Frame = 0
Query: 44 SSGCKAVSS--SSSSSCGNIQNISCPFTLKGDDQQC-DSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENNNSS------IKEDDFLALDQ---GYKLRKVNQPITMMECPSPVISTRYINITS-----PNSSFSSSVLGKYYVYSYAYIVVGYVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKCHDG-CDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILKR-------------MFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPA 655
++ C+A ++ + SSCG+I+NIS PF LK D C D S+ EL+C NRTI+ L K +YV+ I Y+ L+R+VDPGL+ N S ++ D+ D Y + N P+ + CP+PV S + +I + +S+FSS +++Y++ G +++ + D+C ++ AW+++ F K +++ + ++DAL YG+ + W YC +C G CD D C C L S++ T C+ V+ L + M LA RF LG+PFL A + YK RR HLSMY IEDFLQ+ NNL+P+RYAYSDI+K+TNNF DKLGEGG+GTV+KGKLRSG LVAVK+LG+SKA G+EFI+EVAT GRIHH NVV L+GFCFEG K AL+YEFMPNGSLEKYIFR E E SLS +K++ I+ +A GIDYLHRGC++QILHFDIKPHNILLD++F P +SDFGLAK Y T +S V+L ARGT+GYMAPE++YKNIGG+SYKADVYSFGMLL++MA +R+NLNP++D SQI+FPSWVYDQ S G +EM D +E+ERK++KKMI+VALWCIQMKP RPSM K IEMLEGD E L MPPKPF++P E PA
Sbjct: 73 ATSCEATNNHHCNPSSCGDIRNISYPFRLKEDPIHCGDPSY---ELACENNRTIVNLFLQK-YYVQEIIYEKYLMRVVDPGLDEANCSSFPINTLEYDELQMADNPQDAYDIFYTNIPVLFISCPAPVRSPFFSDIMAFCRNHMSSNFSSPT------NNHSYLLFGNHEVSVLNDSCAVNMAAWITKD--FGG-RKAYTSPAGLYDALAYGFLLDWRGIYCQQCSSGFCDRDVNDS--IRCSPKYWQCELLHPSTFRPTFECLKEIWYQKVEFLNQNTAISRELGILIGMCLAGRFLLGVPFLFALIIYKIRRSHLSMYENIEDFLQSPNNLLPVRYAYSDIRKMTNNFNDKLGEGGYGTVFKGKLRSGPLVAVKMLGKSKANGQEFISEVATIGRIHHANVVRLIGFCFEGSKRALVYEFMPNGSLEKYIFR---KETETTSLSCEKLFNIALGIAKGIDYLHRGCEMQILHFDIKPHNILLDEHFAPKLSDFGLAKLYPTENSIVSLTAARGTLGYMAPELYYKNIGGVSYKADVYSFGMLLLEMAGKRKNLNPLVDQRSQIYFPSWVYDQLSKGNSIEMGDASEDERKMLKKMILVALWCIQMKPINRPSMNKVIEMLEGDGELLEMPPKPFQNPDEMPA 698
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WJB7 ((rust resistance kinase Lr10-like isoform X1 {ECO:0000313|RefSeq:XP_027113852.1}))
HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0
Identity = 335/663 (50.53%), Postives = 448/663 (67.57%), Query Frame = 0
Match: A0A6P6WJB7 ((rust resistance kinase Lr10-like isoform X1 {ECO:0000313|RefSeq:XP_027113852.1}))
HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0
Identity = 335/663 (50.53%), Postives = 448/663 (67.57%), Query Frame = 0
Query: 27 KLSLVFMVIYTLLLFLSSSGCKAVSS--SSSSSCGNIQNISCPFTLKGDDQQC-DSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENNNSS------IKEDDFLALDQ---GYKLRKV---NQPITMMECPSPVISTRYINITS-----PNSSFSSSVLGKYYVYSYAYIVVGYVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKCHDGCDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILKR-------------MFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPA 655
KLS+ +++ L+ ++ C+A ++ + SSCG+I+NIS PF LK D C D S+ EL+C NRTI+ L K +YV+ I Y+N L+R+VDPGL+ N S ++ D+ D GY L + N P+ + CP+PV S + +I + S+FSS +++Y++ G +++ + D+C ++ AWV++ F K +++ + ++DAL YG+ + W YC +C G + + C + PC L ++ T C+ V+ L + M LA RF LG+PFL A + YK RR HLSMY IEDFLQ+ NNLMP+RYAYSDI+K+TNNF +KLGEGG+GTV+KGKLRSG LVAVK+LG+SKA G+EFI+EVAT GRIHH NVV L+GFCFEG K AL+YEFMPNGSLEKYIFR E E SLS +K+++I+ +A GIDYLH GCD+QILHFDIKPHN+LLD++F P +SDFGLAK Y T +S V+L ARGT+GYMAPE++YKNIGG+SYKAD+YSFGM L++MA +R+NLNP++D SQI+FPSWVYDQ S G +E+ D +E+ERK+ KKMI++ALWCIQMKP RPSM K IEMLEGD E L MPPKPF++P E PA
Sbjct: 5 KLSIASLIVLVLVSVGLATSCEATNNHHCNPSSCGDIRNISYPFRLKEDPIHCGDPSY---ELACENNRTIVNLFLQK-YYVQEIIYENYLMRVVDPGLDKANCSSFPINTLEYDELQMADNPQDGYTLYDIFYTNIPVLFISCPAPVRSPFFSDIMAFCRNHMPSNFSSPT------NNHSYLLFGDHEVSVLNDSCAVNMAAWVTKD--FGG-RKAYTSPAGLYDALAYGFLLDWRGIYCQQCSSGSCYRYVNGSI-RCSAVYMPCELLHPHTFRPTFECLKEIWYQKVEFLGQYPAIHRELGILIGMCLAGRFLLGVPFLFALIIYKIRRSHLSMYENIEDFLQSPNNLMPVRYAYSDIRKMTNNFNEKLGEGGYGTVFKGKLRSGPLVAVKMLGKSKANGQEFISEVATIGRIHHANVVRLIGFCFEGSKRALVYEFMPNGSLEKYIFR---KETETTSLSCEKLFDIALAIAKGIDYLHSGCDMQILHFDIKPHNVLLDEHFAPKLSDFGLAKLYPTENSIVSLTAARGTLGYMAPELYYKNIGGVSYKADIYSFGMRLLEMAGKRKNLNPLVDQRSQIYFPSWVYDQLSKGNSIEVGDASEDERKMFKKMILIALWCIQMKPINRPSMNKVIEMLEGDGELLEMPPKPFQNPDEMPA 650
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7A0P9 ((Putative stress-induced receptor-like kinase {ECO:0000313|EMBL:MPA49388.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA49388.1}) (Fragment))
HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0
Identity = 343/673 (50.97%), Postives = 447/673 (66.42%), Query Frame = 0
Match: A0A5B7A0P9 ((Putative stress-induced receptor-like kinase {ECO:0000313|EMBL:MPA49388.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA49388.1}) (Fragment))
HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0
Identity = 343/673 (50.97%), Postives = 447/673 (66.42%), Query Frame = 0
Query: 24 ASRKLSLVFMVIYTLLLFLSSSGCKAVSSSSS--SSCGNIQNISCPFTLKGDDQQC-DSSFFTLELSCLKNRTILYLL-------EDKIFYVKSIDYDNLLVRIVDPGLENNNSS---IKEDDFLALDQGYKLRKVNQPITMMECPSPVISTRYINITSPNSSFSSSVLGKYYVYSYAYIVVG---YVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKCHD------------GCDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLR---VTVQILKRMF--------LAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPAE 656
A K +V +++++L+ CKA ++S SSCGNI+NIS PF L D C DSS+ EL+C NRT+L + + V++I+YDN +R+VDPGL+ +N S + F + RK+N + + C +PV S YI+ NSS S+ L + + Y+Y+V+G + ++++ED+C I VA S P ++ + ++ + IHDAL+YG+++ W YC KC GC SS C F P + I+L C+ L+ V V+ + R LAARF G + A L YK RRRHLSMY +IEDFLQ N+LMPIRY Y DIKK+TNNF DKLGEGG+G+VYKGKLRSG LVA+KILG+S A G++FINEVAT GRIHHVNVV L+GFC E K AL+++FMPNGSLEKY F +G+ +S+S ++MYEIS VA GIDYLHRGCD+QILHFDIKPHNILLD+NF P +SDFGLAK Y+T+DS V+L ARGT+GYMAPE+FYKNIGG+SYKADVYSFGMLLM+M +++ LN DH S+ +FPS VYDQ S+GK +E+ D +EEER++VKKMII+ALWCIQMKPS+RPSM K +EMLEG+ E L MPPKPF +PQE P+E
Sbjct: 23 AGSKALVVLLIVFSLIT------CKAQQNNSCYPSSCGNIRNISYPFRLNSDPSNCGDSSY---ELTCENNRTMLNISYWTRSGSGSGSYLVEAINYDNFTIRVVDPGLDKDNCSSLPLHSLSFYDFYTSLQYRKLNTAVIVTSCAAPVNSALYIDTNFCNSSSVSNSLMQDH---YSYVVIGDPMMLTVSDVEDSCSIDVVALASSRGP---INDLRNSSTSIHDALLYGFELTWFGVYCTKCKTYEECYVDKNYNVGCRRSS-------CTVFKPP--------FKISLSCLFRVLKENAVEVRHISREISSKIIGPILAARFFFGFLGVSALLVYKLRRRHLSMYGSIEDFLQNHNDLMPIRYGYPDIKKMTNNFKDKLGEGGYGSVYKGKLRSGGLVAIKILGKSSANGQDFINEVATIGRIHHVNVVRLIGFCAERSKRALVFDFMPNGSLEKYAFSREGN----ISMSCEQMYEISLGVARGIDYLHRGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYSTDDSIVSLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMTGKKKTLNARTDHSSE-YFPSCVYDQLSEGKIVEVVDASEEEREMVKKMIIIALWCIQMKPSDRPSMTKVVEMLEGNDELLQMPPKPFLYPQEMPSE 660
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6VV41 ((rust resistance kinase Lr10-like isoform X1 {ECO:0000313|RefSeq:XP_027106959.1}))
HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 332/644 (51.55%), Postives = 438/644 (68.01%), Query Frame = 0
Match: A0A6P6VV41 ((rust resistance kinase Lr10-like isoform X1 {ECO:0000313|RefSeq:XP_027106959.1}))
HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 332/644 (51.55%), Postives = 438/644 (68.01%), Query Frame = 0
Query: 44 SSGCKAVSS--SSSSSCGNIQNISCPFTLKGDDQQC-DSSFFTLELSCLKNRTILYLLEDKIFYVKSIDYDNLLVRIVDPGLENNNSS------IKEDDFLALDQ---GYKLRKVNQPITMMECPSPVISTRYINITS-----PNSSFSSSVLGKYYVYSYAYIVVGYVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKCHDG-CDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILKR-------------MFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPA 655
++ C+A ++ + SSCG+I+NIS PF LK D C D S+ EL+C NRTI+ L K +YV+ I Y+ L+R+VDPGL+ N S ++ D+ D Y + N P+ + CP+PV S + +I + +S+FSS +++Y++ G +++ + D+C ++ AW+++ F K +++ + ++DAL YG+ + W YC +C G CD D C C L S++ T C+ V+ L + M LA RF LG+ FL A + YK RR HLSMY IEDFLQ+ NNLMP+RYAYSDI+K+TNNF DKLGEGG+GTV+KGKLRSG LVAVK+LG+SKA G+EFI+EVAT GRIHH NVV+L+GFCFEG K AL+YEFMPNGSLEKYIFR E E SLS +K+++I+ +A GIDYLHRGC++QILHFDIKPHNILLD++F P +SDFGLAK Y T +S V+L ARGT+GYMAPE++YKNIGG+SYKADVYSFGMLL++MA +R+NLNP+++ SQI+FPSWVYDQ S G +EM D +E+ERK++KKMI+VALWCIQMKP RPSM K EMLEGD E L PPKPF++P E PA
Sbjct: 22 ATSCEATNNHHCNPSSCGDIRNISYPFRLKEDPIHCGDPSY---ELACENNRTIVNLFLQK-YYVQEIIYEKYLMRVVDPGLDEANCSSFPINTLEYDELQMADNPQDAYDIFYTNIPVLFISCPAPVRSPFFSDIMAFCRNHMSSNFSSPT------NNHSYLLFGNHEVSVLNDSCAVNMAAWITKD--FGG-RKAYTSPAGLYDALAYGFLLDWRGIYCQQCSSGFCDRDVNDS--IRCSPKYWQCELLHPSTFRPTFECLKEIWYQQVEFLNQYTAISRELGILIGMCLAGRFLLGVLFLFALIIYKMRRSHLSMYENIEDFLQSPNNLMPVRYAYSDIRKMTNNFKDKLGEGGYGTVFKGKLRSGPLVAVKMLGKSKANGQEFISEVATIGRIHHANVVKLIGFCFEGSKRALVYEFMPNGSLEKYIFR---KETETASLSCEKLFDIALGIAKGIDYLHRGCEMQILHFDIKPHNILLDEHFAPKLSDFGLAKLYPTENSIVSLTAARGTLGYMAPELYYKNIGGVSYKADVYSFGMLLLEMAGKRKNLNPLVEQRSQIYFPSWVYDQLSKGNSIEMGDASEDERKMLKKMILVALWCIQMKPINRPSMNKVTEMLEGDGELLETPPKPFQNPDEMPA 647
BLAST of XM_017367671.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZXU3 ((Putative stress-induced receptor-like kinase {ECO:0000313|EMBL:MPA49390.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA49390.1}) (Fragment))
HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0
Identity = 342/667 (51.27%), Postives = 448/667 (67.17%), Query Frame = 0
Match: A0A5B6ZXU3 ((Putative stress-induced receptor-like kinase {ECO:0000313|EMBL:MPA49390.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA49390.1}) (Fragment))
HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0
Identity = 342/667 (51.27%), Postives = 448/667 (67.17%), Query Frame = 0
Query: 24 ASRKLSLVFMVIYTLLLFLSSSGCKAVSSSSS--SSCGNIQNISCPFTLKGDDQQC-DSSFFTLELSCLKNRTILYLL-------EDKIFYVKSIDYDNLLVRIVDPGLENNNSS---IKEDDFLALDQGYKLRKVNQPITMMECPSPVISTRYINITSPNSSFSSSVLGKYYVYSYAYIVVG---YVDITEMEDNCRISKVAWVSRHSPFSKVSKVFSNFSEIHDALVYGYDIPWSYFYCLKC--HDGCDTSSPDHHLWACISFSTPCNLPDGSSYHITLLCMPHNLRVTVQILKR---------------MFLAARFSLGLPFLLAFLTYKARRRHLSMYNTIEDFLQAQNNLMPIRYAYSDIKKITNNFGDKLGEGGFGTVYKGKLRSGLLVAVKILGRSKATGKEFINEVATSGRIHHVNVVELLGFCFEGPKHALIYEFMPNGSLEKYIFRNQGSEEEIVSLSWKKMYEISCKVASGIDYLHRGCDIQILHFDIKPHNILLDKNFNPIISDFGLAKSYATNDSTVTLN-ARGTMGYMAPEMFYKNIGGISYKADVYSFGMLLMDMAAQRQNLNPILDHISQIHFPSWVYDQFSDGKELEMKDVNEEERKLVKKMIIVALWCIQMKPSERPSMYKAIEMLEGDVEELVMPPKPFRHPQEDPAE 656
A K +V +++++L+ CKA ++S SSCGNI+NIS PF L D C DSS+ EL+C NRT+L + + V++I+YDN +R+VDPGL+ +N S + F + RK+N + + C +PV S YI+ NSS S+ L + + Y+Y+V+G + ++++ED+C I VA S P ++ + ++ + IHDAL+YG+++ W YC KC ++ CD H+ +C FS P + I+L C+ L+ LK LAARF G + A L YK RRRHLSMY +IEDFLQ N+LMPIRY Y DIKK+TNNF DKLGEGG+G+VYKGKLRSG LVA+KILG+S A G++FINEVAT GRIHHVNVV L+GFC E K AL+++FMPNGSLEKY F +G+ +S+S ++MYEIS VA GIDYLHRGCD+QILHFDIKPHNILLD+NF P +SDFGLAK Y+T+DS V+L ARGT+GYMAPE+FYKNIGG+SYKADVYSFGMLLM+M +++ LN DH S+ +FPS VYDQ S+GK +E+ D +EEER++VKKMII+ALWCIQMKPS+RPSM K +EMLEG+ E L MPPKPF +PQE P+E
Sbjct: 18 AGSKALVVLLIVFSLIT------CKAQQNNSCYPSSCGNIRNISYPFRLNSDPSNCGDSSY---ELTCENNRTMLNISYWTRSGSGSGSYLVEAINYDNFTIRVVDPGLDKDNCSSLPLHSLSFYDFYTSLQYRKLNTAVIVTSCAAPVNSALYIDTNFCNSSSVSNSLMQDH---YSYVVIGDPMMLTVSDVEDSCSIDVVALASSRGP---INDLRNSSTSIHDALLYGFELTWFGVYCTKCKTYEYCDVDK--HYNVSCRRFSCLVFKP---PFKISLSCLYTFLKDLYWFLKSENAVVVRRIIILIIGAILAARFFFGFLGVSALLVYKLRRRHLSMYGSIEDFLQNHNDLMPIRYGYPDIKKMTNNFKDKLGEGGYGSVYKGKLRSGGLVAIKILGKSSANGQDFINEVATIGRIHHVNVVRLIGFCAERSKRALVFDFMPNGSLEKYAFSREGN----ISMSCEQMYEISLGVARGIDYLHRGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYSTDDSIVSLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMTGKKKTLNARTDHSSE-YFPSCVYDQLSEGKIVEVVDASEEEREMVKKMIIIALWCIQMKPSDRPSMTKVVEMLEGNDELLQMPPKPFLYPQEMPSE 659
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7ALL0 | E-Value: 0.000e+0, PID: 55.33 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5J4ZIG0 | E-Value: 0.000e+0, PID: 52.82 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A6P6WEK7 | E-Value: 0.000e+0, PID: 51.30 | (rust resistance kinase Lr10-like isoform X2 {ECO:... [more] |
| A0A1U7WNX9 | E-Value: 0.000e+0, PID: 51.31 | (probable receptor-like protein kinase At1g67000 {... [more] |
| A0A1S3XGJ5 | E-Value: 0.000e+0, PID: 51.31 | (rust resistance kinase Lr10-like {ECO:0000313|Ref... [more] |
| A0A068VNX9 | E-Value: 0.000e+0, PID: 52.02 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A6P6WJB7 | E-Value: 0.000e+0, PID: 50.53 | (rust resistance kinase Lr10-like isoform X1 {ECO:... [more] |
| A0A5B7A0P9 | E-Value: 0.000e+0, PID: 50.97 | (Putative stress-induced receptor-like kinase {ECO... [more] |
| A0A6P6VV41 | E-Value: 0.000e+0, PID: 51.55 | (rust resistance kinase Lr10-like isoform X1 {ECO:... [more] |
| A0A5B6ZXU3 | E-Value: 0.000e+0, PID: 51.27 | (Putative stress-induced receptor-like kinase {ECO... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |