XM_017381596.1 | CarrotOmics

Resource Type:

Polypeptide

Name:

XM_017381596.1

Identifier:

XM_017381596.1-protein

Sequence:

MAAATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPIS
TSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYE
KLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWR
YCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALI
QKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYA
AANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPW
DKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDP
RKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVF
KNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEP
SVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP

Sequence Length:

490

Sequence Checksum:

80b2e1db21bb8ee6025db0d5f42265f3

View location in JBrowse:

DCARv2_Chr2:26266125..26269173-

Organism:

Daucus carota subspecies sativus

Relationship:

There is 1 relationship.
Relationships
The polypeptide, XM_017381596.1, derives from mRNA, XM_017381596.1.

Blast Results:

The following BLAST results are available for this feature:

BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR

BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10

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BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AES3 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 893.264 bits (2307), Expect = 0.000e+0
Identity = 427/488 (87.50%), Postives = 458/488 (93.85%), Query Frame = 0

Query:    3 AATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            AATCSS LIF+++ES  N  SLF YNGLK   +KQVA     + G ISTSAPKCR +KA+ASPTV+APKRE DPKKRIVITGMG+VSVFG+D+DTFY KLLEG SGITLIDRFDASTFSVRFAGQIR FSS GYIDGKNDRRLDDCWRYCLVAGR+ALDDASLGPEVL+TMD+SRIGVLVG+GMGGLTAFSNGVEAL+QKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEAD+M VGGTEAAV ATGVGGFIACRALSQRNDEP +ASRPWDK+RDGFV+GEG+GVLIMESLEHAMKRGANI+AEYLGGA+TCDAHHMTDPR DGLGVSSCI+KSLEDAGVSPEEVNYVNAHATSTLAGDLAE NAIK VFK+TSE+KMNGTKSMIGHGLGA+GGLEAIATIKAI TGWVHPTINQD+LEP VTIDTVPNVKKQHE+NVGISNSFGFGGHNSVVVFAP++P
Sbjct:    5 AATCSSSLIFRTKESGSNRASLFHYNGLKVVESKQVA-----SPGFISTSAPKCRGIKAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYNKLLEGESGITLIDRFDASTFSVRFAGQIRSFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDDASLGPEVLETMDRSRIGVLVGTGMGGLTAFSNGVEALLQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMAVGGTEAAVMATGVGGFIACRALSQRNDEPQKASRPWDKDRDGFVMGEGAGVLIMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGASGGLEAIATIKAITTGWVHPTINQDNLEPEVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVVFAPYRP 487

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BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7B7P2 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 866.3 bits (2237), Expect = 0.000e+0
Identity = 426/486 (87.65%), Postives = 459/486 (94.44%), Query Frame = 0

Query:    5 TCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            +CSSGLIF+++ES  NG SL QYNGL+A  +KQVA  G KT+G ISTSAPKCR +KA+ASPTV+APKRE DPKKRIVITGMG+VSVFG+D+DT+Y KLLEG SGIT IDRFDASTFSVRFAGQIR+FSS GYIDGKNDRRLDDCWRYCLVAG++ALDDASLG EVL+TMD+SRIGVLVG+GMGGLTAFSNGVEALIQKG+KKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATAN+CFYAAANHIRRGEAD+MVVGGTEAAV ATGVGGFIACRALSQRNDEPH+ASRPWDK+RDGFVIGEGSGVLIMESLEHAMKR ANI+AE+LGGAITCDAHHMTDPR DGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAE NAIK VFK+TSE+KMNGTKSMIGHGLGAAGGLEAIATIKAI TGW+HPTINQ +LEP VTIDTVPNVKK HE+NV ISNSFGFGGHNSVVVFAPF+P
Sbjct:   66 SCSSGLIFRTKESGTNGASLLQYNGLRAVESKQVASTGSKTNGFISTSAPKCRRIKAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTYYNKLLEGESGITPIDRFDASTFSVRFAGQIREFSSKGYIDGKNDRRLDDCWRYCLVAGKRALDDASLGHEVLETMDRSRIGVLVGTGMGGLTAFSNGVEALIQKGFKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANHCFYAAANHIRRGEADIMVVGGTEAAVMATGVGGFIACRALSQRNDEPHKASRPWDKDRDGFVIGEGSGVLIMESLEHAMKREANIIAEFLGGAITCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAIATIKAITTGWLHPTINQYNLEPDVTIDTVPNVKKNHEVNVAISNSFGFGGHNSVVVFAPFRP 551

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BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZV23 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 864.759 bits (2233), Expect = 0.000e+0
Identity = 425/488 (87.09%), Postives = 453/488 (92.83%), Query Frame = 0

Query:    3 AATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            A +CSSGLIF++ ES   G SL QYNGL+   +KQVA +G KT+G ISTSA KCR +KA+ASP  +APKRE DPKKRIVITGMG+VSVFGN++DTFY KLLEG SGIT IDRFDASTFSVRFAGQIRDFSS GYIDGKNDRRLDDCWRYCLVAGR+ALDDASLGPEVL+TMD+SRIGVLVGSGMGGLTAFS GVEALIQKG+KKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR EAD+MVVGGTEAAV ATGVGGFIACRALSQRNDEP +ASRPWD+ RDGFVIGEGSGVLIMESLEHAMKRGANI+AEYLGGAITCDAHHMTDPR DGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAE NAIK VFK TSE+KMNGTKSMIGHGLGAAGGLEAIATIKAI TGW+HPTINQ +LEP VTIDTVPNVKK+HE+NV ISNSFGFGGHNSVVVF+PF+P
Sbjct:    5 AGSCSSGLIFRTNESGNKGASLLQYNGLRPVESKQVASSGSKTNGFISTSAAKCRRIKAVASPNFSAPKREKDPKKRIVITGMGLVSVFGNEIDTFYNKLLEGESGITPIDRFDASTFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDDASLGPEVLETMDRSRIGVLVGSGMGGLTAFSKGVEALIQKGFKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRREEADIMVVGGTEAAVMATGVGGFIACRALSQRNDEPQKASRPWDQERDGFVIGEGSGVLIMESLEHAMKRGANIIAEYLGGAITCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKETSELKMNGTKSMIGHGLGAAGGLEAIATIKAITTGWLHPTINQYNLEPEVTIDTVPNVKKKHEVNVAISNSFGFGGHNSVVVFSPFRP 492

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BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QMZ4 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 857.055 bits (2213), Expect = 0.000e+0
Identity = 415/488 (85.04%), Postives = 458/488 (93.85%), Query Frame = 0

Query:    3 AATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            A +CS+GL+FK++ES  N  SLFQ+NGL+A   KQ+  +G K +  ISTSA KC+ +KAM++PTV+APKRE DPKKR+VITGMG+VSVFG+DVDTFY+KLLEG SGITLIDRFDASTFSVRFAGQIRDFSS GYIDGKNDRRLDDCWRYCLVAGR+ALDDA LGPEVL+TMD+S+IGVLVG+GMGGLTAFSNGVE+LI KGYKKI+PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEA++MVVGGTEAAV  +GVGGFIACRALSQRNDEPH+ASRPWDK+RDGFV+GEGSGVL+MESLEHAM+RGANI+AEYLGGAITCDAHHMTDPR DGLGVSSCI+K+LEDAGVSPEEVNYVNAHATSTLAGDLAE NAIK VFK+TSE+KMNGTKSMIGHGLGAAGGLEAIATIKAINTGW+HPTINQ +LEP VTIDTVPNVKK+HE+NV ISNSFGFGGHNSVV FAPFKP
Sbjct:    5 AGSCSTGLVFKTKESCSNKASLFQHNGLRAVEKKQLGSSGFKPNRFISTSASKCQRIKAMSAPTVSAPKREMDPKKRVVITGMGLVSVFGSDVDTFYDKLLEGESGITLIDRFDASTFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDDAKLGPEVLETMDRSKIGVLVGTGMGGLTAFSNGVESLILKGYKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEANIMVVGGTEAAVMPSGVGGFIACRALSQRNDEPHKASRPWDKDRDGFVMGEGSGVLVMESLEHAMERGANIIAEYLGGAITCDAHHMTDPRSDGLGVSSCISKALEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWLHPTINQYNLEPEVTIDTVPNVKKKHEVNVAISNSFGFGGHNSVVAFAPFKP 492

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BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N0SVD6 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0
Identity = 403/487 (82.75%), Postives = 442/487 (90.76%), Query Frame = 0

Query:    4 ATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            ATCS+GLI              +YNGL+   AKQV   GV ++  +S S  KCR +KAMASPTV+APKRETDPKKR+VITGMG+VSVFG D DTFY KLLEG SGITLIDRF+AS FSVRF GQIRDFSS GYIDGK+DRRLDDCWRYCLVAG++AL+DA+LGP VL+TMDK +IG L+G+GMGG+TAFS+GVE+L+QKGYKKI+PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCF++AANHIRRGEAD+M+ GGTEAA+N TGVGGFIACRALSQRNDEPHRASRPWDKNRDGFV+GEGSGVL+MESLE A KRGA ++AEYLGGA+TCDAHHMTDPRKDGLGVS+CITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIK VFK+TSEIKMNGTKSMIGH LGAAGGLEAIATIKAI TGW+HPTINQDDLEPSVTIDTVPNVKKQHE+NVGISNSFGFGGHNSVVVFAPFKP
Sbjct:    2 ATCSAGLI--------------RYNGLRPIEAKQVGSFGVGSNVSVSASGSKCRKIKAMASPTVSAPKRETDPKKRVVITGMGLVSVFGTDTDTFYNKLLEGQSGITLIDRFEASEFSVRFGGQIRDFSSKGYIDGKSDRRLDDCWRYCLVAGKRALEDANLGPAVLETMDKMKIGALIGTGMGGVTAFSSGVESLVQKGYKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFHSAANHIRRGEADIMIAGGTEAAINPTGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVMGEGSGVLVMESLESATKRGATVIAEYLGGAVTCDAHHMTDPRKDGLGVSTCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKKVFKDTSEIKMNGTKSMIGHCLGAAGGLEAIATIKAITTGWLHPTINQDDLEPSVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVVFAPFKP 474

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BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5YAU3 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0
Identity = 413/490 (84.29%), Postives = 451/490 (92.04%), Query Frame = 0

Query:    1 MAAATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            +A   CSSGL+F++RE+ GNG SL QYN L+A  + Q++  G K    IS+SA KCRT++AMASPT +APKRE DPKKRIVITGMG+VSVFG+D + FY KLLEG SGIT IDRFDA+++SVRFAGQIRDFSS GYIDGKNDRRLDDCWRYCLVAGR+AL+DA+LG EVL+ MD+++IGVLVG+GMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEAD+MV GGTEAA+  TG+GGFIACRALSQRNDEP RASRPWDK+RDGFV+GEGSGVLIMESLEHAMKRGANI+AEYLGGA+TCDAHHMT+PR DGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAE NAIK VFK+TSEIKMNGTKSMIGHGLGAAGGLEAIATIKAI TGWVHPTINQD+LEP V IDTVPNVKKQHE+NV ISNSFGFGGHNSVVVFAPFKP
Sbjct:    4 IATGACSSGLLFRNREAGGNGASLAQYNELRAVESLQLSSTGTKPKWFISSSASKCRTIRAMASPTASAPKREKDPKKRIVITGMGLVSVFGSDTEHFYNKLLEGESGITQIDRFDATSYSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEDANLGAEVLEKMDRTKIGVLVGTGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIMPTGIGGFIACRALSQRNDEPKRASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANIIAEYLGGAVTCDAHHMTNPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAITTGWVHPTINQDNLEPDVIIDTVPNVKKQHEVNVAISNSFGFGGHNSVVVFAPFKP 493

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BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067JZ53 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 845.884 bits (2184), Expect = 0.000e+0
Identity = 411/488 (84.22%), Postives = 449/488 (92.01%), Query Frame = 0

Query:    3 AATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            A TCSS ++F+SR    NG SL QYNGL+     Q+A  G K+ G +STS PK RT++AMASP V+APKRE DPKKR+VITGMGVVSVFGNDVD FY KLLEG SGI+LIDRFDAS+FSVRFAGQIRDFSS GYIDGKNDRRLDDCWRYCLVAG++AL+DA+LGPEVLD MD++R GVL+G+GMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEAD+MV GGTEAAV  TGVGGFIACRALSQRND+P RASRPWDKNRDGFV+GEG+GVLIMESL+HA+KRGANI+AEYLGGA+TCDAHHMTDPR DGLGVS+CITKSLEDA VSPEEVNY+NAHATSTLAGDLAE NAIK VFK+TSEIKMNGTKSMIGHGLGAAGGLEA+ATIKAI TGW+HPTINQD+LEP VTIDTVPN+KKQH++NVGISNSFGFGGHNSVVVFAPF P
Sbjct:    5 AGTCSSSVLFRSRS---NGASLAQYNGLRPLETVQMAPAGTKSSGFLSTSVPKSRTIRAMASPNVSAPKREKDPKKRVVITGMGVVSVFGNDVDAFYNKLLEGESGISLIDRFDASSFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALEDANLGPEVLDNMDRTRTGVLIGTGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAVMPTGVGGFIACRALSQRNDDPKRASRPWDKNRDGFVMGEGAGVLIMESLDHALKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSTCITKSLEDAKVSPEEVNYINAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGAAGGLEAVATIKAITTGWLHPTINQDNLEPDVTIDTVPNLKKQHQVNVGISNSFGFGGHNSVVVFAPFTP 489

[Close]

BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2K2BUN6 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 845.114 bits (2182), Expect = 0.000e+0
Identity = 399/488 (81.76%), Postives = 445/488 (91.19%), Query Frame = 0

Query:    1 MAAATCSSGLIFKSRESIGNGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPF 488
            +A A CSS ++F SRE   +G SL QY GL+     Q+A  G +  G ISTSA K RT++AM S TV+APKRE DPKKR+VITGMG+VSVFG+ +DTFY+KLLEG SGI+LIDRFDAS+FSVRFAGQIRDFSS GYIDGKNDRRLDDCWRYCLVAG++AL+DA+LG EVL+ MD++RIGVLVG+GMGGLTAFSNGVE+L+QKGYKK++PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFY+AANHIRRGEAD+MV GGTEA+V   GVGGFIACRALSQRN++P +ASRPWDK+RDGFV+GEGSGVLIMESL+HAMKRGANI+AEYLGGA+TCDAHHMTDPR DGLGVS+CI KSLED+GVSPEEVNYVNAHATSTLAGDLAE NAIK VFKNTSEIKMNGTKSMIGHGLGAAG LEAIATIKAINTGW+HPTINQD++E  VTIDTVPNVKKQHE+NVGISNSFGFGGHNSVVVFAPF
Sbjct:    4 IAGAACSSNVLFGSREVGSDGASLAQYRGLRPVENMQLAPTGRRPSGSISTSASKSRTIRAMVSQTVSAPKREKDPKKRVVITGMGLVSVFGSGIDTFYDKLLEGESGISLIDRFDASSFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALEDANLGSEVLENMDRTRIGVLVGTGMGGLTAFSNGVESLVQKGYKKMSPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYSAANHIRRGEADIMVAGGTEASVIPAGVGGFIACRALSQRNEDPKKASRPWDKDRDGFVMGEGSGVLIMESLDHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSTCIAKSLEDSGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKNTSEIKMNGTKSMIGHGLGAAGALEAIATIKAINTGWLHPTINQDNIELDVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVVFAPF 491

[Close]

BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A540MSQ7 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 843.188 bits (2177), Expect = 0.000e+0
Identity = 415/489 (84.87%), Postives = 453/489 (92.64%), Query Frame = 0

Query:    3 AATCSSGLIFKSRESIG-NGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            A  CSSGL+F+SRE+   NG S+ Q++GL+      + VNG K++G   TSAPKCR +KAMAS TV+APKRETDPKKR VITGMG+VSVFG+D+DTFY KLLEG SGITLIDRFDASTFSVRFAGQIR FSS GYIDGKNDRRLDDCWRY +VAG+KAL+DA+LGPEVL TMD++RIGV+VG+GMGGLTAFS GVE+LIQKGYKKI+PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEAD+MVVGGTEAAV  TGVGGFIACRALSQRNDEPHRASRPWDKNRDGFV+GEG+GVL+MESLE A+KRGA I+AEYLGGA+TCDAHHMTDPR DGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIK VFK+TSE+K+NGTKSMIGHGLGAAGGLEAIATIKAINTGW+HPTINQDDLEP+VTIDTVPNVKKQHE+NV ISNSFGFGGHNSVVVFAPF P
Sbjct:    5 AGPCSSGLLFRSREAGSINGASMAQFDGLRQVETMHMPVNGNKSNGLGFTSAPKCRIIKAMASSTVSAPKRETDPKKRTVITGMGLVSVFGSDIDTFYNKLLEGESGITLIDRFDASTFSVRFAGQIRGFSSKGYIDGKNDRRLDDCWRYGIVAGKKALEDANLGPEVLQTMDRTRIGVIVGTGMGGLTAFSAGVESLIQKGYKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAVMPTGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVMGEGAGVLVMESLESALKRGAPIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKKVFKDTSEMKINGTKSMIGHGLGAAGGLEAIATIKAINTGWLHPTINQDDLEPAVTIDTVPNVKKQHEVNVAISNSFGFGGHNSVVVFAPFSP 493

[Close]

BLAST of XM_017381596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N5H0A3 (Beta-ketoacyl-[acyl-carrier-protein] synthase I {ECO:0000256|ARBA:ARBA00013191} (2.3.1.41 {ECO:0000256|ARBA:ARBA00013191}))

HSP 1 Score: 842.032 bits (2174), Expect = 0.000e+0
Identity = 414/489 (84.66%), Postives = 453/489 (92.64%), Query Frame = 0

Query:    3 AATCSSGLIFKSRESIG-NGVSLFQYNGLKAAGAKQVAVNGVKTHGPISTSAPKCRTVKAMASPTVTAPKRETDPKKRIVITGMGVVSVFGNDVDTFYEKLLEGTSGITLIDRFDASTFSVRFAGQIRDFSSTGYIDGKNDRRLDDCWRYCLVAGRKALDDASLGPEVLDTMDKSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADVMVVGGTEAAVNATGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVIGEGSGVLIMESLEHAMKRGANIVAEYLGGAITCDAHHMTDPRKDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKSVFKNTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWVHPTINQDDLEPSVTIDTVPNVKKQHEINVGISNSFGFGGHNSVVVFAPFKP 490
            A  CSSG++F+SRE+ G NG S+ Q++GL+      + VNG K++G   TSAPKCR +KAMAS TV+APKRETDPKKR VITGMG+VSVFG+D+DTFY KLLEG SGITLIDRFDASTFSVRFAGQIR FSS GYIDGKNDRRLDDCWRY +VAG+KAL+DA+LGPEVL TMD++RIGV+VG+GMGGLTAFS GVE+LIQKGYKKI+PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEAD+MVVGGTEAAV  TGVGGFIACRALSQRNDEPHRASRPWDKNRDGFV+GEG+GVL+MESLE A+KRGA I+AEYLGGA+TCDAHHMTDPR DGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIK VFK+TS +K+NGTKSMIGHGLGAAGGLEAIATIKAINTGW+HPTINQDDLEP+VTIDTVPNVKKQHE+NV ISNSFGFGGHNSVVVFAPF P
Sbjct:    5 AGPCSSGVLFRSREAGGINGASMAQFDGLRQVETMHMPVNGNKSNGLGFTSAPKCRIIKAMASSTVSAPKRETDPKKRTVITGMGLVSVFGSDIDTFYNKLLEGESGITLIDRFDASTFSVRFAGQIRTFSSKGYIDGKNDRRLDDCWRYGIVAGKKALEDANLGPEVLQTMDRTRIGVIVGTGMGGLTAFSAGVESLIQKGYKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAVMPTGVGGFIACRALSQRNDEPHRASRPWDKNRDGFVMGEGAGVLVMESLESALKRGAPIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEFNAIKKVFKDTSTMKINGTKSMIGHGLGAAGGLEAIATIKAINTGWLHPTINQDDLEPTVTIDTVPNVKKQHEVNVAISNSFGFGGHNSVVVFAPFSP 493


Match Name	Stats	Description
A0A5J5AES3	E-Value: 0.000e+0, PID: 87.50	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A5B7B7P2	E-Value: 0.000e+0, PID: 87.65	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A5J4ZV23	E-Value: 0.000e+0, PID: 87.09	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A2R6QMZ4	E-Value: 0.000e+0, PID: 85.04	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A7N0SVD6	E-Value: 0.000e+0, PID: 82.75	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A6P5YAU3	E-Value: 0.000e+0, PID: 84.29	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A067JZ53	E-Value: 0.000e+0, PID: 84.22	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A2K2BUN6	E-Value: 0.000e+0, PID: 81.76	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A540MSQ7	E-Value: 0.000e+0, PID: 84.87	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]
A0A5N5H0A3	E-Value: 0.000e+0, PID: 84.66	Beta-ketoacyl-[acyl-carrier-protein] synthase I {E... [more]

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR	This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.