Resource Type:
Polypeptide
Name:
XM_017386406.1
Identifier:
XM_017386406.1-protein
Sequence:
MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSNSG
NLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRS
ASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQS
QQHQGTSSATSFSAGRAGQISLPSGPRIPGSFIQDPLSHLQKKPRLDIKQ
EDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQS
MPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRL
MQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGV
FPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDL
PRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEF
CARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSN
MMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQ
KDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQ
NGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSA
QQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHFLQSHQRA
LNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLA
GNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSAS
DSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLFSDLEESMA
YGGWKTGL
Sequence Length:
858
Sequence Checksum:
e1aad4692c73781ec6e5a80349e9774d
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017386406.1, derives from mRNA, XM_017386406.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AJM8 ((Putative transcriptional regulator SLK2 {ECO:0000313|EMBL:MPA55701.1}) (1.1.3.15 {ECO:0000313|EMBL:MPA55701.1}))
HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0
Identity = 620/866 (71.59%), Postives = 704/866 (81.29%), Query Frame = 0
Match: A0A5B7AJM8 ((Putative transcriptional regulator SLK2 {ECO:0000313|EMBL:MPA55701.1}) (1.1.3.15 {ECO:0000313|EMBL:MPA55701.1}))
HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0
Identity = 620/866 (71.59%), Postives = 704/866 (81.29%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSN-SGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQGTSS---ATSFSAGRAGQISLPSGPRIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHF----LQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWK 855
M PSRVAGGL +SS++SGI FQGD QS VGNSHLSS + +++ G RSN+GP SGDVSNT+LNSVA+SGPSVGASSLVTDANSGLS GP+LQRSAS NT+SY+RLPASPMSFSSNNISIS SSV+DGSSVVQQNSN+DP+ Q QQ Q ATS + R GQ+SLP+GPR+PGSFIQ+P +S + KKPRLDIKQEDI QQQ +QQ+LQRQD MQ+Q NPQLQALIQQQRLRQQQQQQQQLLQSMP +QRA QQQQQQQ + QQG+QPASA KRPYDGGVCSRRLMQYLYHQRQRP DNT YWRKFVAEYYSPRAKKRWCLSLYDNVG HSLGVFPQA ++AWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELL+LD+PRECR SSG+MMLEYGKAVQESVYEQLRVVREGQLR+IFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQ I ESGSDGVSQQD Q SNM++TA RQ K+LE QSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCR+ K GP+E LK +PR AS AK Q+QKMQE+EQ+A I GL TDR TLNKL+A + GLN+Q+ ++ MVGR ALSGS QAA+AL++YQN+LMRQNS NSNSNS QQEA+SS +N NQ +S +FQGS ++L GT+QN SGFS+S Q QR+LN G LQQNH Q Q SQ LQQ +IQ+LLQD+N+ GGV QQQ L G +AN S DGLG+G+ +S +AA N + P P+RSNSFK S SDSSA GNNG +++A D+ QNL LS+E+ QDIA +F+E+G F SDLE+SM Y GWK
Sbjct: 1 MMPSRVAGGLT---HSSSSSGICFQGDGQSQAVGNSHLSSSFGNSSNSIPGTARSNLGPISGDVSNTILNSVASSGPSVGASSLVTDANSGLSGGPHLQRSASINTESYLRLPASPMSFSSNNISISGSSVMDGSSVVQQNSNQDPSSQQVQQSQQQQGASSATSLPSSRMGQVSLPTGPRVPGSFIQEPNNMSQVLKKPRLDIKQEDIMQQQVLQQLLQRQDSMQLQTHNPQLQALIQQQRLRQQQQQQQQLLQSMPPVQRAH--LLQQQQQQQLQLRQHLQQQGMQPASAMKRPYDGGVCSRRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHSLGVFPQATVEAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDMPRECRFSSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQRAIAESGSDGVSQQDLQTNSNMIMTAQRQLDKTLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCREHKVGPIEGLKNYPRHASAAKLQMQKMQEMEQLAGIQGLPTDRNTLNKLMALHPGLNSQMVNDHHMVGRGALSGSAQAALALTSYQNLLMRQNSMNSNSNSFQQEASSSFNNSNQNSSSAFQGSTALLPGTLQNLAASGFSNSRLSQQQQQQQQRSLNGIGLLQQNHAQPSQGSQALQQHVIQQLLQDMNTTTG-GGV--QQQSLGGQNANGSVARDGLGFGNTSSAATAASGNGQGSVMGPTPSRSNSFKAASHSDSSAGGGNNGFNRKAPDLSQNLHLSEEMVQDIAHDFTENGFFNSDLEDSMGY-GWK 857
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BBV1 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8539880.1}))
HSP 1 Score: 1036.94 bits (2680), Expect = 0.000e+0
Identity = 610/863 (70.68%), Postives = 694/863 (80.42%), Query Frame = 0
Match: A0A5J5BBV1 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8539880.1}))
HSP 1 Score: 1036.94 bits (2680), Expect = 0.000e+0
Identity = 610/863 (70.68%), Postives = 694/863 (80.42%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSN-SGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQGTSSA---TSFSAGRAGQISLPSGPRIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHFLQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWKT 856
M PSR AGGL +SS++SG+FFQGD QS +GNS LSS + +++ G RSN+GP SGDVSN++LNSV +SGPSVGASSLVTDANSGLS GP+LQRSAS NT+SYMRLPASPMSFSSNNISIS SSV+DGSSVVQQNSN+DP+ Q QQ Q A TS + R G +SLP+GPR+PGSFIQ+P +S + KKPRLDIKQEDI QQQ +QQ+LQRQD MQ+Q NPQLQALIQQQRLRQQQQQ Q SMP +QRA +L QQQQQQQ QL+ + Q QQG+QP SA KRPYDGGVCSRRLMQYLYHQRQRP DNT YWRKFV EYYSPRAKKRWCLSLYDNVG HSLGVFPQA MDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELL+LDLPRECR SG+MMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCAR HEELLPRRLVAPQVNQLLQVAQKCQ I ESGSDGVSQQD Q SNM+V A RQ ++LE QSLNDLGFSKRYVRCLQISEVVNSMKD+MDFCR+ K GP+E LK +PR + AK Q+QKMQE+EQ+A I GL TDR TLN+L+ + GLN+Q+ ++ M GR ALSG QAA+AL++YQNMLMRQNS NSNSNS QQEA+SS +N NQ +SP+FQGS + L GT+QN SGFS+S Q Q +LN G QQNH Q Q SQ LQQ MIQ+LLQD+ NN TGG PQQ L+G +AN S DGLGYG+N S +AA N + P P+R+NSFK S SDSSAA GNNG +Q+ D+PQNL LS+E+ QDIA +F+E+G F SDLE++M+Y GWK
Sbjct: 1 MVPSRGAGGLT---HSSSSSGLFFQGDVQSQALGNSRLSSSFGNSSNSIPGTGRSNLGPVSGDVSNSVLNSVVSSGPSVGASSLVTDANSGLSGGPHLQRSASINTESYMRLPASPMSFSSNNISISGSSVMDGSSVVQQNSNQDPSSQQVQQGQQQQGASSATSLPSLRMGHVSLPNGPRLPGSFIQEPNNMSQVLKKPRLDIKQEDILQQQVLQQVLQRQDSMQLQTHNPQLQALIQQQRLRQQQQQFLQ---SMPPVQRAHMLHQQQQQQQLQLRQQLQ-QQGMQPVSAMKRPYDGGVCSRRLMQYLYHQRQRPPDNTIVYWRKFVTEYYSPRAKKRWCLSLYDNVGHHSLGVFPQATMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQRAIAESGSDGVSQQDLQTNSNMIVAAQRQLDRTLELQSLNDLGFSKRYVRCLQISEVVNSMKDVMDFCREHKIGPIEGLKNYPRHGTAAKLQMQKMQEMEQLAGIQGLPTDRNTLNQLMTLHPGLNSQMGNDHHMAGRGALSGPAQAALALNSYQNMLMRQNSMNSNSNSLQQEASSSFNNPNQNSSPTFQGSTAQLPGTLQNLAASGFSNSRLPQQQQHSLNGIGLQQQNHAQPSQGSQALQQHMIQQLLQDM--NNKTGGGVPQQS-LSGQNANGSVARDGLGYGNNNSAATAASGNGQGSVMGPTPSRNNSFKAASHSDSSAAGGNNGFNQKESDVPQNLHLSEEMVQDIAHDFTENGFFNSDLEDNMSY-GWKA 852
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AG29 ((Putative SEUSS-like 2 {ECO:0000313|EMBL:MPA55700.1}) (1.1.3.15 {ECO:0000313|EMBL:MPA55700.1}))
HSP 1 Score: 1025.39 bits (2650), Expect = 0.000e+0
Identity = 607/866 (70.09%), Postives = 695/866 (80.25%), Query Frame = 0
Match: A0A5B7AG29 ((Putative SEUSS-like 2 {ECO:0000313|EMBL:MPA55700.1}) (1.1.3.15 {ECO:0000313|EMBL:MPA55700.1}))
HSP 1 Score: 1025.39 bits (2650), Expect = 0.000e+0
Identity = 607/866 (70.09%), Postives = 695/866 (80.25%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSN-SGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQGTSS---ATSFSAGRAGQISLPSGPRIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSS---HFLQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWKT 856
M PSRVAGGL +SS++SG+ FQGD QS VGNSHLSS + +++ G RSN+GP SGDVSNT+LNSVA+SGPSVGASSLVTDANSGLS GP+LQRSAS NT+SY+RLPASPMSFSSNNISIS SS +DGSSV+QQ SN+DP+ QQ Q TS + R GQ+SLP+GPR+ SFIQ+P +S + KKPRLDIKQEDI QQQ +QQ+LQRQD MQ+Q NPQLQALIQQQRLRQQQQQQQQLLQSMP +QRA QQQQQQQ + QQG+QPASA KRPYDGGVCSRRLMQYLYHQRQRP DNT YWRKFVAEYYSPRAK+RWCLSLYDNVG HSLGVFPQA MDAW+CDICG+KSGRGFEATFEVLPRLNEIKFGSGVIDELL+LD+PRECR SSG+MMLEYGKAVQESVYEQLRVVREGQLR+IFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQ I ESGSDGVSQQD Q SNM+V A RQ +++LE QSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCR+ K GP+E LK +P+ A+ AK Q+Q+M++L GL TDR TLNKL+AQ+ G+N+Q+ ++QMVGR ALSGS QAA+ALS+YQN+LMRQNS NSNSNS QEA+ S +N NQ S +FQG ++L GT+QN +SGFS+S Q QR+LN NG LQQNH Q Q SQ LQQ MIQ+LLQD+ NN GGV QQQ AG +AN S G DG+G+GSN S +AA VN + P P+RSNSFK S DSSAA GNNG +Q+A D+ QNLQLSDE+ QDIA + +E+G F SDLE++M+Y WK
Sbjct: 1 MMPSRVAGGLT---HSSSSSGLCFQGDGQSQAVGNSHLSSSFGNSSNSIPGTARSNLGPISGDVSNTILNSVASSGPSVGASSLVTDANSGLSGGPHLQRSASINTESYLRLPASPMSFSSNNISISGSSAMDGSSVLQQCSNQDPSSQHRQQSQQQQGASSVTSLPSSRIGQVSLPTGPRVSSSFIQEPNNMSQVPKKPRLDIKQEDIMQQQVLQQLLQRQDSMQLQTHNPQLQALIQQQRLRQQQQQQQQLLQSMPPVQRAH--LLQQQQQQQLQLRQHLQQQGMQPASAMKRPYDGGVCSRRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKQRWCLSLYDNVGHHSLGVFPQATMDAWKCDICGAKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDMPRECRFSSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQRAIAESGSDGVSQQDLQTNSNMVVAAWRQLSRTLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCREHKAGPIEGLKNYPQHATAAKLQMQEMEQL-------GLPTDRNTLNKLMAQHPGMNSQMGNSHQMVGRGALSGSAQAALALSSYQNLLMRQNSMNSNSNSLHQEASPSFNNSNQNPSSTFQGPTALLPGTLQNLPSSGFSNSQLPQQQQMQQRSLNGNGLLQQNHPQPSQGSQALQQHMIQQLLQDMK-NNTGGGV--QQQSHAGQNANGSVGRDGMGFGSNPSAATAASVNGPGSIMGPTPSRSNSFKAASNIDSSAAGGNNGFNQKAPDLSQNLQLSDEMVQDIAHDLTENGFFNSDLEDNMSY-CWKA 850
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VPU9 ((probable transcriptional regulator SLK2 {ECO:0000313|RefSeq:XP_009763909.1, ECO:0000313|RefSeq:XP_009763910.1}))
HSP 1 Score: 1020.76 bits (2638), Expect = 0.000e+0
Identity = 592/864 (68.52%), Postives = 678/864 (78.47%), Query Frame = 0
Match: A0A1U7VPU9 ((probable transcriptional regulator SLK2 {ECO:0000313|RefSeq:XP_009763909.1, ECO:0000313|RefSeq:XP_009763910.1}))
HSP 1 Score: 1020.76 bits (2638), Expect = 0.000e+0
Identity = 592/864 (68.52%), Postives = 678/864 (78.47%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHL-SSFGNSINSNSGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQ---GTSSATSFSAGRAGQISLPSGP--RIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHFLQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWK 855
MAPSRVAGG+A +SS++SGIFFQGD QS V GNSHL SSFGNS NS GN RS++GP SGDVSNT+LNSVA+SGPSVGASSLVTDANSGLS GPNLQRSAS N +SYMRLPASP+SFSSNNIS+S SSV+DGSS+VQQ+SN+DPN Q Q +Q G SSATS R GQ+ LP+G R+PGSFIQDP LSH+QKKPRLDIKQEDI QQQ +QQ+LQRQDP+ +QN NPQLQALIQQQRLRQQQQQQ QLLQ +P MQRAQ QQQQQ +Q QQ VQP SA KRP DG +CSRRLMQYLYHQRQRP DN YWRKFVAEYYSPRAKKRWCLSLY+NVG HSLGVFPQ+ MDAW CDICGSKSGRGFEATFEVLPRLNEIKF SGVIDELL+LD PRECR SG+MMLEY KAVQESVYEQLRVVREGQLR+IFT DLKILSWEFCAR HEELLPRRLVAPQVNQLLQVAQKCQ+T+TE+G DGVSQQD Q SNM+VT RQ AKSLE QSLNDLGFSKRYVRCLQI+EVVNSMKDLMDFCRD K GP+E LK FPR ++ AKFQ Q QE EQ I GL TDR LN+L++ + GLN+Q++ N M GR ALSGS QAA+ L+N+QN LMRQNS NSNSN+ QQ+A+ S + N S QG+ +L GTMQN SG SS++ Q QR LN +G + QN Q SQ LQQQMIQ+LLQD+N+ N+GG QQQ L+G S A +G +G+N+S+ +A + ++ P P+RS+SFK S + SA+ GN+ SQ+A D+PQ+L LSDEL D+ EFSE+G F SDL+ +M Y GWK
Sbjct: 1 MAPSRVAGGMA---HSSSSSGIFFQGDGQSQVAGNSHLTSSFGNSSNSLPGNPRSSLGPLSGDVSNTVLNSVASSGPSVGASSLVTDANSGLSGGPNLQRSASINNESYMRLPASPLSFSSNNISVSGSSVMDGSSMVQQSSNQDPNSQQPQHNQQRQGASSATSLPTSRVGQVQLPNGQGLRVPGSFIQDPVALSHMQKKPRLDIKQEDILQQQVLQQLLQRQDPLHMQNSNPQLQALIQQQRLRQQQQQQHQLLQYLPPMQRAQ----LLQQQQQLQLRQQLQQQSVQPVSAMKRPSDGVLCSRRLMQYLYHQRQRPPDNAIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHSLGVFPQSTMDAWHCDICGSKSGRGFEATFEVLPRLNEIKFSSGVIDELLFLDFPRECRSPSGLMMLEYAKAVQESVYEQLRVVREGQLRIIFTSDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQTTLTETGPDGVSQQDLQANSNMVVTTGRQLAKSLELQSLNDLGFSKRYVRCLQIAEVVNSMKDLMDFCRDHKAGPIEGLKNFPRHSTAAKFQAQNAQETEQQVGIQGLPTDRSALNRLMSLHPGLNSQMSNNQHMGGRGALSGSGQAALQLTNFQNSLMRQNSMNSNSNTTQQDASPSFNYSNHSQSSLSQGANGILPGTMQNLPVSGLSSTNLQQQQQRLLN-SGLIPQNQSQPSHGSQVLQQQMIQQLLQDMNA--NSGGCGVQQQCLSGQSGGGIASREGFAFGNNSSVAAATATHGPVSSVGPTPSRSDSFKSASNCEPSASAGNSAFSQKAPDLPQSLHLSDELVPDMTHEFSENGFFSSDLDNNMNY-GWK 853
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314L849 ((Putative transcriptional regulator slk2 {ECO:0000313|EMBL:OIT37748.1}))
HSP 1 Score: 1006.9 bits (2602), Expect = 0.000e+0
Identity = 589/864 (68.17%), Postives = 674/864 (78.01%), Query Frame = 0
Match: A0A314L849 ((Putative transcriptional regulator slk2 {ECO:0000313|EMBL:OIT37748.1}))
HSP 1 Score: 1006.9 bits (2602), Expect = 0.000e+0
Identity = 589/864 (68.17%), Postives = 674/864 (78.01%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHL-SSFGNSINSNSGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQ---GTSSATSFSAGRAGQISLPSGP--RIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHFLQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWK 855
MAPSRVAGG+A +SS++SGIFFQGD QS V GNSHL SSFGNS NS GN RS++GP S DVSNT+LNSVA+SGPSVGASSLVTDANSGLS GPNLQRSAS N +SYMRLPASP+SFSSNNIS+S SSV+DGSS+ QQ+SN+DPN Q Q +Q G SSATS R GQ+ LP+G R+PGSFIQDP LSH+QKKPRLDIKQEDI QQQ +QQ+LQRQDP+ +QN NPQLQALIQQQRLRQQQQQQ QLLQ +P +QRAQ QQQQQ +Q QQ VQP SA KRP DG +CSRRLMQYLYHQRQRP DN+ YWRKFVAEYYSPRAKKRWCLSLY+NVG HSLGVFPQ+ MDAW CDICGSKSGRGFEATFEVLPRLNEIKF SGVIDELL+LD PRECR SG+MMLEY KAVQESVYEQLRVVREGQLR+IFT DLKILSWEFCAR HEELLPRRLVAPQVNQLLQVAQKCQ+T+TE+G DGVSQQD Q SNM+VT RQ AKSLE QSLNDLGFSKRYVRCLQI+EVVNSMKDLMDFCRD K GP+E LK FPR + AKFQ Q QE EQ I GL TDR LNKL++ + G+N+Q++ N M GR LSGS QAA+ L+N+QN L+RQNS NSNSN+ QQ+ + + + N S QG +L GTMQN SG SS++ Q QR LN +G L QN Q SQ LQQQMIQ+LLQD+N+ N+GG QQQ LAG S SA +GL +G+N+S+ +A + ++ P P+RSNSFK SAS+ A GN+ SQ+A D+P +L LSDE+ D+ EFSE+G F SDL+ +M Y GWK
Sbjct: 1 MAPSRVAGGMA---HSSSSSGIFFQGDGQSQVAGNSHLTSSFGNSSNSLPGNPRSSLGPLSADVSNTVLNSVASSGPSVGASSLVTDANSGLSGGPNLQRSASINNESYMRLPASPLSFSSNNISVSGSSVMDGSSMAQQSSNQDPNSQQPQHNQQRQGASSATSLPTSRVGQVQLPNGQGLRVPGSFIQDPVALSHMQKKPRLDIKQEDILQQQVLQQLLQRQDPLHMQNSNPQLQALIQQQRLRQQQQQQHQLLQYLPPLQRAQ----LLQQQQQLQLRQQLQQQSVQPVSAMKRPSDGVLCSRRLMQYLYHQRQRPPDNSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHSLGVFPQSTMDAWHCDICGSKSGRGFEATFEVLPRLNEIKFSSGVIDELLFLDFPRECRFPSGLMMLEYAKAVQESVYEQLRVVREGQLRIIFTSDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQTTLTETGPDGVSQQDLQANSNMVVTTGRQLAKSLELQSLNDLGFSKRYVRCLQIAEVVNSMKDLMDFCRDHKAGPIEGLKNFPRHGTAAKFQAQNAQETEQQVGIQGLPTDRSALNKLMSLHPGMNSQMSNNQHMGGRGTLSGSAQAALQLTNFQNSLIRQNSMNSNSNTTQQDVSPAFNYSNHSQSSLLQGPNGILPGTMQNLPVSGLSSTNLQQQQQRLLN-SGLLPQNQSQPSHGSQVLQQQMIQQLLQDMNA--NSGGCGVQQQCLAGQSGGASASREGLAFGNNSSVVAATATHGPGSSVGPTPSRSNSFK--SASNCEWA-GNSAFSQKASDLPASLHLSDEMVPDMTHEFSENGFFSSDLDNNMNY-GWK 850
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4E707 ((Full=PREDICTED: mRNAional {ECO:0000313|EMBL:VVA11056.1}))
HSP 1 Score: 997.653 bits (2578), Expect = 0.000e+0
Identity = 584/875 (66.74%), Postives = 685/875 (78.29%), Query Frame = 0
Match: A0A5E4E707 ((Full=PREDICTED: mRNAional {ECO:0000313|EMBL:VVA11056.1}))
HSP 1 Score: 997.653 bits (2578), Expect = 0.000e+0
Identity = 584/875 (66.74%), Postives = 685/875 (78.29%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSN-SGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQ--------GTSSATSFSAGRAGQISLPSGPRIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQ---PASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHF-----LQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWK 855
M PSRVAGGLA SS++SGIFFQGD QS +V NSHLSS + +++ G RSN+GP SGD++N +L+ VA SGPSVGASSLVTDANS LS GP+LQRSAS NT+SY+RLPASPMSFSSNNIS+S SS++DGSSVVQQNS D N Q QQ+Q G SSATS + + GQ+SLP G R+PG+FIQDP L+H+QKKPRLDIKQED+ QQQ +QQ+LQRQDPMQ Q NPQ+QA +Q+ +QQ Q+LQSMPQ+QRAQL QQQQQQQQQQ Q Q Q P S+ KRPYDGGVC+RRLMQYLYHQRQRP DN+ YWRKFV EYYSPRAKKRWCLSLYDNVG H+LGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELL+LDLPRECR SGVMMLEYGKAVQESVYEQLRVVREGQLR+IFT DLKILSWEFCAR HEELLPRRLVAPQVNQL+QVAQKCQSTI ESGSDG+SQQD Q SNM++TA RQ AKSLE QSLNDLGFSKRYVRCLQISEVVNSMKDL+DFCR+ K GP+E LK +PR A+ AK Q+QKMQE+EQ+AS G+ TDR TLNKL+A + G+NNQIN N+ MV R A+SGS QAA+ L+ YQN+L+RQNS NSN+NS QQEA+SS +N N S +FQG+++++ G+MQN SG SS H Q QR+L+ N L QNH S Q +Q LQQQ+IQ+LLQ++++N+ GG Q P +ANVS G GL +G N + A N V+ + P P+RSNSFK + SDSSA GNN +QRA D+P NL L +++ DIA EF+++G F SDL+++M Y GWK
Sbjct: 340 MVPSRVAGGLA---QSSSSSGIFFQGDGQSQLVVNSHLSSSFGNSSNSIPGTGRSNLGPVSGDMNNAVLSGVANSGPSVGASSLVTDANSVLSGGPHLQRSASINTESYLRLPASPMSFSSNNISMSGSSIMDGSSVVQQNSQHDHNSQQIQQNQQHQHPRQQGASSATSLATSQTGQVSLPMGARVPGAFIQDPNNLAHVQKKPRLDIKQEDMLQQQVLQQLLQRQDPMQFQGRNPQIQA----LLQQQRLRQQHQILQSMPQLQRAQLQQQQQQQQQQQQHQLQLRQLQQQSLQPVSSVKRPYDGGVCARRLMQYLYHQRQRPSDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGVMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPRHATAAKLQMQKMQEMEQLASAQGMPTDRNTLNKLMALHPGMNNQINNNHHMVNRGAMSGSAQAALQLTTYQNLLLRQNSMNSNANSLQQEASSSFNNSNHSPSSTFQGASALIPGSMQNLPGSGLSSPHLPSRQPHQMQQRSLSSNSLLPQNHSPSSQGNQALQQQVIQQLLQEMSNNSGGGGQQSLSGP----NANVSVGRSGLSFGGNNPAATPATSN-VSGGHGPAPSRSNSFKAAANSDSSAGGGNNAYNQRASDLPSNLHLQEDMVPDIAHEFTDNGFFNSDLDDNMGY-GWK 1201
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4BSB4 ((probable transcriptional regulator SLK2 {ECO:0000313|RefSeq:XP_016491779.1}))
HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 581/864 (67.25%), Postives = 669/864 (77.43%), Query Frame = 0
Match: A0A1S4BSB4 ((probable transcriptional regulator SLK2 {ECO:0000313|RefSeq:XP_016491779.1}))
HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 581/864 (67.25%), Postives = 669/864 (77.43%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHL-SSFGNSINSNSGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQ---GTSSATSFSAGRAGQISLPSGP--RIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHFLQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWK 855
MAPSRVAGG+A +SS++SGIFFQGD QS V GNSHL SSFGNS NS GN RS++GP SGDVSNT+LNSVA+SGPSVGASSLVTDANSGLS GPNLQRSAS N +SYMRLPASP+SFSSNNIS+S SSV+DGSS+VQQ+SN+DPN Q Q +Q G SSATS R GQ+ LP+G R+PGSFIQDP LSH+QKKPRLDIKQEDI QQQ +QQ+LQRQDP+ +QN NPQLQALIQQQRLRQQQQQQ QLLQ +P MQRAQ QQQQQ +Q QQ VQP SA KRP DG +CSR+LMQYLYHQRQRP DN YWRKFVAEYYSPRAKKRWCLSLY+NVG HSLGVFPQ+ MDAW CDICGSKSGRGFEATFEVLPRLNEIKF SGVIDELL+LD PRECR SG+MMLEY KAVQESVYEQLRVVREGQLR+IFT DLKILSWEFCAR HEELLPRRLVAPQVNQLLQVAQKCQ+T+TE+G + + T +VT RQ AKSLE QSLNDLGFSKRYVRCLQI+EVVNSMKDLMDFCRD K GP+E LK FPR ++ AKFQ Q QE EQ I GL TDR LN+L++ + GLN+Q++ N M GR ALSGS QAA+ L+N+QN LMRQNS NSNSN+ QQ+A+ S + N S QG+ +L GTMQN SG SS++ Q QR LN +G + QN Q SQ LQQQMIQ+LLQD+N+ N+GG QQQ L+G S A +G +G+N+S+ +A + + P P+RS+SFK S + SA+ GN+ SQ+A D+PQ+L LSDEL D+ EFSE+G F SDL+ +M Y GWK
Sbjct: 1 MAPSRVAGGMA---HSSSSSGIFFQGDGQSQVAGNSHLTSSFGNSSNSLPGNPRSSLGPLSGDVSNTVLNSVASSGPSVGASSLVTDANSGLSGGPNLQRSASINNESYMRLPASPLSFSSNNISVSGSSVMDGSSMVQQSSNQDPNSQQPQHNQQRQGASSATSLPTSRVGQVQLPNGQGLRVPGSFIQDPVALSHMQKKPRLDIKQEDILQQQVLQQLLQRQDPLHMQNSNPQLQALIQQQRLRQQQQQQHQLLQYLPPMQRAQ----LLQQQQQLQLRQQLQQQSVQPVSAMKRPSDGVLCSRQLMQYLYHQRQRPPDNAIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHSLGVFPQSTMDAWHCDICGSKSGRGFEATFEVLPRLNEIKFSSGVIDELLFLDFPRECRSPSGLMMLEYAKAVQESVYEQLRVVREGQLRIIFTSDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQTTLTETGXENIISCHVVVTFLRVVTTGRQLAKSLELQSLNDLGFSKRYVRCLQIAEVVNSMKDLMDFCRDHKAGPIEGLKNFPRHSTAAKFQAQNAQETEQQVGIQGLPTDRSALNRLMSLHPGLNSQMSNNQHMGGRGALSGSGQAALQLTNFQNSLMRQNSMNSNSNTTQQDASPSFNYSNHSQSSLSQGANGILPGTMQNLPVSGLSSTNLQQQQQRLLN-SGLIPQNQSQPSHGSQVLQQQMIQQLLQDMNA--NSGGCGVQQQCLSGQSGGGIASREGFAFGNNSSVAAATATHGPGNSVGPTPSRSDSFKSASNCEPSASAGNSAFSQKAPDLPQSLHLSDELVPDMTHEFSENGFFSSDLDNNMNY-GWK 853
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4E5F0 ((Full=PREDICTED: mRNAional {ECO:0000313|EMBL:VVA11057.1}))
HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 584/876 (66.67%), Postives = 685/876 (78.20%), Query Frame = 0
Match: A0A5E4E5F0 ((Full=PREDICTED: mRNAional {ECO:0000313|EMBL:VVA11057.1}))
HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 584/876 (66.67%), Postives = 685/876 (78.20%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSN-SGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQ--------GTSSATSFSAGRAGQISLPSGPRIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQ---PASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHF-----LQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWKT 856
M PSRVAGGLA SS++SGIFFQGD QS +V NSHLSS + +++ G RSN+GP SGD++N +L+ VA SGPSVGASSLVTDANS LS GP+LQRSAS NT+SY+RLPASPMSFSSNNIS+S SS++DGSSVVQQNS D N Q QQ+Q G SSATS + + GQ+SLP G R+PG+FIQDP L+H+QKKPRLDIKQED+ QQQ +QQ+LQRQDPMQ Q NPQ+QA +Q+ +QQ Q+LQSMPQ+QRAQL QQQQQQQQQQ Q Q Q P S+ KRPYDGGVC+RRLMQYLYHQRQRP DN+ YWRKFV EYYSPRAKKRWCLSLYDNVG H+LGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELL+LDLPRECR SGVMMLEYGKAVQESVYEQLRVVREGQLR+IFT DLKILSWEFCAR HEELLPRRLVAPQVNQL+QVAQKCQSTI ESGSDG+SQQD Q SNM++TA RQ AKSLE QSLNDLGFSKRYVRCLQISEVVNSMKDL+DFCR+ K GP+E LK +PR A+ AK Q+QKMQE+EQ+AS G+ TDR TLNKL+A + G+NNQIN N+ MV R A+SGS QAA+ L+ YQN+L+RQNS NSN+NS QQEA+SS +N N S +FQG+++++ G+MQN SG SS H Q QR+L+ N L QNH S Q +Q LQQQ+IQ+LLQ++++N+ GG Q P +ANVS G GL +G N + A N V+ + P P+RSNSFK + SDSSA GNN +QRA D+P NL L +++ DIA EF+++G F SDL+++M Y GWK
Sbjct: 1 MVPSRVAGGLA---QSSSSSGIFFQGDGQSQLVVNSHLSSSFGNSSNSIPGTGRSNLGPVSGDMNNAVLSGVANSGPSVGASSLVTDANSVLSGGPHLQRSASINTESYLRLPASPMSFSSNNISMSGSSIMDGSSVVQQNSQHDHNSQQIQQNQQHQHPRQQGASSATSLATSQTGQVSLPMGARVPGAFIQDPNNLAHVQKKPRLDIKQEDMLQQQVLQQLLQRQDPMQFQGRNPQIQA----LLQQQRLRQQHQILQSMPQLQRAQLQQQQQQQQQQQQHQLQLRQLQQQSLQPVSSVKRPYDGGVCARRLMQYLYHQRQRPSDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGVMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPRHATAAKLQMQKMQEMEQLASAQGMPTDRNTLNKLMALHPGMNNQINNNHHMVNRGAMSGSAQAALQLTTYQNLLLRQNSMNSNANSLQQEASSSFNNSNHSPSSTFQGASALIPGSMQNLPGSGLSSPHLPSRQPHQMQQRSLSSNSLLPQNHSPSSQGNQALQQQVIQQLLQEMSNNSGGGGQQSLSGP----NANVSVGRSGLSFGGNNPAATPATSN-VSGGHGPAPSRSNSFKAAANSDSSAGGGNNAYNQRASDLPSNLHLQEDMVPDIAHEFTDNGFFNSDLDDNMGY-GWKA 863
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5U519 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4271371.1}))
HSP 1 Score: 992.26 bits (2564), Expect = 0.000e+0
Identity = 584/873 (66.90%), Postives = 684/873 (78.35%), Query Frame = 0
Match: A0A6J5U519 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4271371.1}))
HSP 1 Score: 992.26 bits (2564), Expect = 0.000e+0
Identity = 584/873 (66.90%), Postives = 684/873 (78.35%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSN-SGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQ--------GTSSATSFSAGRAGQISLPSGPRIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHF-----LQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWKT 856
M PSRVAGGLA SS++SGIFFQGD QS +V NSHLSS + +++ G RSN+GP SGD++N +L+ VA SGPSVGASSLVTDANS LS GP+LQRSAS NT+SY+RLPASPMSFSSNNIS+S SS++DGSSVVQQNS D N Q QQ+Q G SSATS + + GQ+SLP G R+PG+FIQDP L+H+QKKPRLDIKQED+ QQQ +QQ+LQRQDPMQ Q NPQ+Q L+QQQRLRQQ Q Q + Q + Q QQQQQQQQ QLQ+RQ QQ +QP S+ KRPYDGGVC+RRLMQYLYHQRQRP DN+ YWRKFV EYYSPRAKKRWCLSLYDNVG H+LGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELL+LDLPRECR SGVMMLEYGKAVQESVYEQLRVVREGQLR+IFT DLKILSWEFCAR HEELLPRRLVAPQVNQL+QVAQKCQSTI ESGSDG+SQQD Q SNM++TA RQ AKSLE QSLNDLGFSKRYVRCLQISEVVNSMKDL+DFCR+ K GP+E LK +PR A+ AK Q+QKMQE+EQ+AS G+ TDR TLNKL+A + G+NNQIN N+ MV R A+SGS QAA+ L+ YQN+L+RQNS NSN+NS QQEA+SS +N N S +FQG+++++ G+MQN SG SS H Q QR+L+ N L QNH S Q +Q LQQQ+IQ+LLQ++++N+ GG Q P +AN S G GL +G N + A N V+ + P P+RSNSFK + SDSSA GNN +QRA D+P NL L +++ DIA EF+E+G F SDL+++M Y GWK
Sbjct: 1 MVPSRVAGGLA---QSSSSSGIFFQGDGQSQLVVNSHLSSSFGNSSNSIPGTGRSNLGPVSGDMNNAVLSGVANSGPSVGASSLVTDANSVLSGGPHLQRSASINTESYLRLPASPMSFSSNNISMSGSSIMDGSSVVQQNSQHDHNSQQIQQNQQHQHPRQQGASSATSLATSQTGQVSLPMGARVPGAFIQDPNNLAHVQKKPRLDIKQEDMLQQQVLQQLLQRQDPMQFQGRNPQIQVLLQQQRLRQQHQILQSMPQLQRAQLQQQQQQQQQQQQQHQLQLRQLQQQSLQPVSSVKRPYDGGVCARRLMQYLYHQRQRPSDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGVMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPRHATAAKLQMQKMQEMEQLASAQGMPTDRNTLNKLMALHPGMNNQINNNHHMVNRGAMSGSAQAALQLTTYQNLLLRQNSMNSNANSLQQEASSSFNNSNHSPSSTFQGASALIPGSMQNLPGSGLSSPHLPSRQPHQMQQRSLSSNSLLPQNHSPSSQGNQALQQQVIQQLLQEMSNNSGGGGQQSLSGP----NANGSVGRSGLSFGGNNPAATPATSN-VSGGHGPAPSRSNSFKAAANSDSSAGGGNNAYNQRASDLPSNLHLQEDMVSDIAHEFTENGFFNSDLDDNMGY-GWKA 864
BLAST of XM_017386406.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4ERU9 ((Uncharacterized protein {ECO:0000313|EMBL:THG19560.1}))
HSP 1 Score: 991.49 bits (2562), Expect = 0.000e+0
Identity = 598/862 (69.37%), Postives = 685/862 (79.47%), Query Frame = 0
Match: A0A4S4ERU9 ((Uncharacterized protein {ECO:0000313|EMBL:THG19560.1}))
HSP 1 Score: 991.49 bits (2562), Expect = 0.000e+0
Identity = 598/862 (69.37%), Postives = 685/862 (79.47%), Query Frame = 0
Query: 1 MAPSRVAGGLAGLANSSTNSGIFFQGDRQSHVVGNSHLSSFGNSINSN-SGNLRSNMGPNSGDVSNTLLNSVAASGPSVGASSLVTDANSGLSVGPNLQRSASFNTDSYMRLPASPMSFSSNNISISASSVLDGSSVVQQNSNKDPNCYQSQQHQGTSSA---TSFSAGRAGQISLPSGPRIPGSFIQDP--LSHLQKKPRLDIKQEDIQQQQAIQQILQRQDPMQIQNPNPQLQALIQQQRLRQQQQQQQQLLQSMPQMQRAQLLQQQQQQQQQQLQMRQQLQQGVQPASAGKRPYDGGVCSRRLMQYLYHQRQRPQDNTFTYWRKFVAEYYSPRAKKRWCLSLYDNVGIHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLYLDLPRECRLSSGVMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARHHEELLPRRLVAPQVNQLLQVAQKCQSTITESGSDGVSQQDSQNTSNMMVTAARQFAKSLESQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDQKDGPMESLKKFPRLASPAKFQLQKMQELEQMASINGLQTDRGTLNKLVAQNGGLNNQINCNNQMVGRAALSGSPQAAMALSNYQNMLMRQNSFNSNSNSAQQEATSSVSNVNQKASPSFQGSASVLSGTMQNPQTSGFSSSHFLQSHQRALNVNGGLQQNHLQSPQNSQGLQQQMIQRLLQDINSNNNTGGVQPQQQPLAGNSANVSAGSDGLGYGSNTSMGSAAQVNRVATTNNPMPTRSNSFKGVSASDSSAAVGNNGNSQRACDIPQNLQLSDELAQDIAQEFSEHGLF-SDLEESMAYGGWK 855
M PSRVAGGL +SS++SGIFFQGD QS VGNSHLSS + +++ G RSN+ P SGD SNT+LNSVA+SGPSVGASSLVTDANSGLS GP+LQRSASFNT+SYMRLPASPMSFSSNNISIS SSV+DGSSVVQQ+SN+DP+ Q Q Q A TS R GQ+SLP GPR+PGS IQDP ++ LQKKPRLDIKQEDI QQQ +QQ+LQRQ+ MQ+Q NPQLQALIQQQR+RQQQQQQQQ LQS+P +QRA +LQQQQQQQQQ +Q QQG+QP S+ KRP D GVCSRRLMQYLYHQRQRP +T YWRKFVAEYYSPRAKKRWCLSLYDNVG HSLGVFPQA MDAWQCDIC SKSGRGFEATFEVLPRLNEIKFGSGVIDELL+LDLPRECR SG+MMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCAR HEELLPRRLVAPQVNQLLQVAQKCQSTI ESG DG+SQQD Q SN++VTA RQ A++LE QSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRD K GP+E LK +PR A+ AK Q+QKM ++EQ+A+I GL TDR TLNKL+A + GLN+ ++ NN +GR ALSGS QAA+AL+NYQN++MRQNS NSNSNS QQEA+SS++N NQ S FQG+ S+L GTMQN SGFS+S Q QR+LN N GL PQ S Q +IQ+LL D+NSN+ + L+G N + +GLG+GSN + SAA + P P+RSNSFK S SDSSAA GNNG +Q+ D+PQNL LS+E+ QDIA EF+ +GLF S L+++M + WK
Sbjct: 1 MTPSRVAGGLV---HSSSSSGIFFQGDGQSQAVGNSHLSSSFGNSSNSIPGAGRSNLAPVSGDASNTVLNSVASSGPSVGASSLVTDANSGLSGGPHLQRSASFNTESYMRLPASPMSFSSNNISISGSSVMDGSSVVQQSSNQDPSSQQVPQSQQQQGASSATSLPTSRMGQVSLPPGPRVPGSCIQDPNNIAQLQKKPRLDIKQEDIMQQQVLQQLLQRQESMQLQTHNPQLQALIQQQRMRQQQQQQQQFLQSIPPVQRAHILQQQQQQQQQLQLRQQLQQQGMQPMSSIKRPNDNGVCSRRLMQYLYHQRQRPPTHTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHSLGVFPQATMDAWQCDICNSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRVVREGQLRVIFTPDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTIAESGPDGISQQDLQTNSNLVVTAGRQLARTLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDHKAGPIEGLKNYPRHATAAKVQMQKMHDMEQLATIQGLPTDRNTLNKLIALHPGLNSPMSNNNHTIGRGALSGSAQAALALTNYQNIMMRQNSMNSNSNSLQQEASSSLNNSNQNPSSPFQGATSLLPGTMQNLPVSGFSNSQLSQ-QQRSLNGNNGL-------PQQSHPQPQHVIQQLLHDMNSNSGS---------LSGQHGNGNVTRNGLGFGSNAT--SAATAVSGSAMGGPTPSRSNSFKAASNSDSSAAGGNNGFNQKPPDLPQNLHLSEEMVQDIAHEFTVNGLFNSVLDDNMGF-DWK 839
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7AJM8 | E-Value: 0.000e+0, PID: 71.59 | (Putative transcriptional regulator SLK2 {ECO:0000... [more] |
| A0A5J5BBV1 | E-Value: 0.000e+0, PID: 70.68 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8539... [more] |
| A0A5B7AG29 | E-Value: 0.000e+0, PID: 70.09 | (Putative SEUSS-like 2 {ECO:0000313|EMBL:MPA55700.... [more] |
| A0A1U7VPU9 | E-Value: 0.000e+0, PID: 68.52 | (probable transcriptional regulator SLK2 {ECO:0000... [more] |
| A0A314L849 | E-Value: 0.000e+0, PID: 68.17 | (Putative transcriptional regulator slk2 {ECO:0000... [more] |
| A0A5E4E707 | E-Value: 0.000e+0, PID: 66.74 | (Full=PREDICTED: mRNAional {ECO:0000313|EMBL:VVA11... [more] |
| A0A1S4BSB4 | E-Value: 0.000e+0, PID: 67.25 | (probable transcriptional regulator SLK2 {ECO:0000... [more] |
| A0A5E4E5F0 | E-Value: 0.000e+0, PID: 66.67 | (Full=PREDICTED: mRNAional {ECO:0000313|EMBL:VVA11... [more] |
| A0A6J5U519 | E-Value: 0.000e+0, PID: 66.90 | (Uncharacterized protein {ECO:0000313|EMBL:CAB4271... [more] |
| A0A4S4ERU9 | E-Value: 0.000e+0, PID: 69.37 | (Uncharacterized protein {ECO:0000313|EMBL:THG1956... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |