Resource Type:
Polypeptide
Name:
XM_017386869.1
Identifier:
XM_017386869.1-protein
Sequence:
MGAQRSHMSNLNLVYIFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGS
PILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFA
SIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSA
MSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFR
LQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFN
TSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRP
ADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCC
KERGDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKPQDN
YLKGPIVSSLAPMPREELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPP
PPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPLPPTTVR
SYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSS
QLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDA
LLADDESKPSWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDD
ELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVY
SFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQ
GKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRDFD
Sequence Length:
795
Sequence Checksum:
d650d38d293f73440e48f0acdc32f928
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017386869.1, derives from mRNA, XM_017386869.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z0I9 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 990.334 bits (2559), Expect = 0.000e+0
Identity = 543/804 (67.54%), Postives = 640/804 (79.60%), Query Frame = 0
Match: A0A5B6Z0I9 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 990.334 bits (2559), Expect = 0.000e+0
Identity = 543/804 (67.54%), Postives = 640/804 (79.60%), Query Frame = 0
Query: 1 MGAQRSHMSNLNL-VY--IFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNE-TPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCCKER--GDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKPQDNYLKGPIVSSLAPMPR--EELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPL-PPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
MG +RS ++ L+L +Y +F+ +LI+ S G+TNP DVAAIN+LY A+G P LP W GGDPC DAWQGV+C ++I+SI N AN+ G LGDNLGSF+SIK I LSNN IGG+IP++LP+++Q ++L+DN+FTGSIP SLSS+NQLSAMSLN NQLTG+IPD+FQGLTVLVNLDLSSN L+GQLPPSLE LSSLTT R+QNNQLSGTLDVLQ LPLRDLN+ENN FSGPIPE LLSI FK DGNPFN+++ P PPTSPT +P +P SG AP +E TP + ADGPS T ++NSK+T + TK IV ISI VF +IL+L L+L +PRCC+ R DR +R+EIAPYIG+REN + SL QP +QTEK PKV +V+P++ + GP L P+PR +ELNV +MSA+PK ++HE DM+RFD DS+ PPP PPPPPP PPP L + V V PI+PA+ V S+ L P TTV+SY+IA+LQQYTNSFSQENLIGGGMLG+VY AQLP+GKL+AVKKLD+R SSQ KDD+FLDLVNSIDKIRHANVVE++GYCAEHG+RLL+YEYCSNGTLQDAL +DDE K SWN+RIRMALGAARAL+YLHE CEP ++HRNFKS NVLL+DEL VHVSDCGLA LISSGSVSQLSG+LLS YGYGAPEFESG+YTS SDVYSFGVVMLELLTGRKSHD TR+R EQFL RWAIPQLHDIDALSRMVDPSL G+YP KSLS FADII RCVQPEPEFRP MSEVVQDL Q+IR++
Sbjct: 1 MGGKRSAINCLDLKIYAQVFVGFMLIYTVRVSRGYTNPGDVAAINNLYAALGYPPLPGWVPSGGDPCADAWQGVQCINTDINSIILNGANLGGQLGDNLGSFSSIKAIGLSNNHIGGSIPSSLPLTIQNVFLSDNQFTGSIPSSLSSLNQLSAMSLNNNQLTGEIPDAFQGLTVLVNLDLSSNNLSGQLPPSLENLSSLTTLRMQNNQLSGTLDVLQYLPLRDLNIENNLFSGPIPENLLSIPNFKKDGNPFNSTITPLPPPTSPTTTPPVPP------------LSG-----APSSERTPGKQADGPSVTEESNSKRTRLT--TKSIVGISIAGVFLFIILVLGLLLFMPRCCRGRQAADRFSKRHEIAPYIGSRENTTDNESLVQPSNQTEKVPKVAVVRPKEEHQTGPRRMGLIPVPRNEQELNVQRMSAIPKQDNHERDMSRFDIDSLRPPPTPPPPPPPPPPTL---------FEKVIVKPIVPAEITTVKPSTKSLNPSTTVKSYTIAALQQYTNSFSQENLIGGGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLDLVNSIDKIRHANVVELMGYCAEHGERLLIYEYCSNGTLQDALHSDDEFKKKLSWNIRIRMALGAARALEYLHEVCEPSIIHRNFKSVNVLLNDELAVHVSDCGLATLISSGSVSQLSGHLLSAYGYGAPEFESGVYTSKSDVYSFGVVMLELLTGRKSHDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLNGEYPAKSLSHFADIISRCVQPEPEFRPPMSEVVQDLTQMIRKE 776
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z1Z9 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 989.178 bits (2556), Expect = 0.000e+0
Identity = 541/804 (67.29%), Postives = 641/804 (79.73%), Query Frame = 0
Match: A0A5B6Z1Z9 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 989.178 bits (2556), Expect = 0.000e+0
Identity = 541/804 (67.29%), Postives = 641/804 (79.73%), Query Frame = 0
Query: 1 MGAQRSHMSNLNL-VY--IFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNE-TPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCCKER--GDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKPQDNYLKGPIVSSLAPMPR--EELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPL-PPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
MG +RS ++ L+L +Y +F+ +LI+ S G+TNP DVAAIN+LY A+G P LP W GGDPC DAWQGV+C ++I+SI N AN+ G LGDNLGSF+SIK I LSNN IGG+IP++LP+++Q ++L+DN+FTGSIP SLSS+NQLSAMSLN NQLTG+IPD+FQGLTVLVNLDLSSN L+GQLPPSLE LSSLTT R+QNNQLSGTLDVLQ LPLRDLN+ENN FSGPIPE LLSI FK DGNPFN+++ P PPTSPT +P +P SG AP +E TP + ADGPS T ++NSK+T + TK IV ISI VF +IL+L L+L +PRCC+ R DR +R+EIAPYIG+REN + SL QP +QTEK PKV +V+P++ + GP L P+PR +ELNV +MSA+PK ++HE DM+RFD DS+ PPP PPPPPP PPP L + V V PI+PA+ V S+ L P TTV+SY+IA+LQQYTNSFSQENLIGGGMLG+VY AQLP+GKL+AVKKLD+R SSQ KDD+FLDLVNSIDKIRHANVVE++GYCAEHG+RLL+YEYCSNGTLQDAL +DDE K SWN+RIRMALGAARAL+YLHE CEP ++HRNFKS NVLL+DEL VHVSDCGLA LISSGSVSQLSG+LLS YGYGAPEFESG+YTS SDVYSFGVVMLELLTGRKSHD TR+R EQFL RWAIPQLHDIDALSRMVDPSL G+YP KSLS FAD+I RCVQPEPEFRP MSEVVQDL+Q+I+++
Sbjct: 1 MGGKRSAINCLDLKIYAQVFVGFMLIYTVRVSRGYTNPGDVAAINNLYAALGYPPLPGWVPSGGDPCADAWQGVQCINTDINSIILNGANLGGQLGDNLGSFSSIKAIGLSNNHIGGSIPSSLPLTIQNVFLSDNQFTGSIPSSLSSLNQLSAMSLNNNQLTGEIPDAFQGLTVLVNLDLSSNNLSGQLPPSLENLSSLTTLRMQNNQLSGTLDVLQYLPLRDLNIENNLFSGPIPENLLSIPNFKKDGNPFNSTITPLPPPTSPTTTPPVPP------------LSG-----APSSERTPGKQADGPSVTEESNSKRTRLT--TKSIVGISIAGVFLFIILVLGLLLFMPRCCRGRQAADRFSKRHEIAPYIGSRENTTDNESLVQPSNQTEKVPKVAVVRPKEEHQTGPRRMGLIPVPRNEQELNVQRMSAIPKQDNHERDMSRFDIDSLRPPPTPPPPPPPPPPTL---------FEKVIVKPIVPAEITTVKPSTKSLNPSTTVKSYTIAALQQYTNSFSQENLIGGGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLDLVNSIDKIRHANVVELMGYCAEHGERLLIYEYCSNGTLQDALHSDDEFKKKLSWNIRIRMALGAARALEYLHEVCEPSIIHRNFKSVNVLLNDELAVHVSDCGLATLISSGSVSQLSGHLLSAYGYGAPEFESGVYTSKSDVYSFGVVMLELLTGRKSHDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLNGEYPAKSLSHFADVISRCVQPEPEFRPPMSEVVQDLIQMIQKE 776
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LLJ8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7141719.1}))
HSP 1 Score: 971.074 bits (2509), Expect = 0.000e+0
Identity = 519/809 (64.15%), Postives = 615/809 (76.02%), Query Frame = 0
Match: A0A834LLJ8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7141719.1}))
HSP 1 Score: 971.074 bits (2509), Expect = 0.000e+0
Identity = 519/809 (64.15%), Postives = 615/809 (76.02%), Query Frame = 0
Query: 1 MGAQRSHMSNLNL---VYIFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCCKER--GDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVK------PQDNYLKGPIVSSL--APMPREELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILP-AQTIPVNSSSGPLPPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADD--ESKPSWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
MG +RS +S LNL V+ F+ +L+ A S G TNP DVAAIN+LYIA+G+P +P W S GGDPCG AWQGVEC+ +NI+SI N AN+ G+LGDNLGSF+SI+ I L+NN IGG+IP+NLPV++Q +L+DN+FTGSIP SLS++ +LSAMSLN NQLTG+IPD+F+GL L+NLDLSSN L+GQLP S E LSSLTT RLQNNQLSGTLDVLQDLPLRDLNVENN F+GPIPE+LL I FK DGNPFNT+VAP PTSPT S + PP P+S + +T + ADGPSA+ +NS + T +IV ISI S VIL L L+L +PRC + R DR+ + E+APY+ R+N + GSL QP ++ EK PKV ++K P++++ GP +SL P E NV +MS +PK +H IDM+R D DS+ PPPPP P PP PPP V VNPI P A T S+ PLP V+SY+IASLQQYTNSFSQENLIG GMLGNVY A+LP+GKL+AVKKLD+R SQ KD +FLDLVN ID+IRHANVVE++GYCAEHGQRLL+YEYCSNGTLQDAL +DD +++ +WN RIRMALGAARAL+YLHE CEPP++HR FKS+NVLLDDEL+VHVSDCGLA LISSGSVSQLSGNLL+ YGYGAPEFESGIYTS SDVYSFGVVMLELLTGRKSHDSTRSR EQFL RWAIPQLHDIDALSRMVDPSL+GKYP KSLS F DII RCVQ EPE+RP MSEVV DLL++IRR+
Sbjct: 1 MGLKRSAISWLNLEIYVHFFVWFVLVSVARNSLGDTNPADVAAINNLYIALGNPPIPGWVSTGGDPCGGAWQGVECNNTNINSITLNGANLGGELGDNLGSFSSIRKISLANNHIGGSIPSNLPVTMQNFFLSDNQFTGSIPSSLSTLIELSAMSLNANQLTGEIPDAFEGLIGLINLDLSSNNLSGQLPTSFENLSSLTTLRLQNNQLSGTLDVLQDLPLRDLNVENNLFNGPIPEQLLGIPNFKKDGNPFNTTVAPLPSPTSPTTSGS-------TPPVAGAPSSSGSQSSG---QTHGKKADGPSASEASNSTSAKKYLTTGRIVGISIASALLFVILALALLLFMPRCLRGRRDADRISKPQEVAPYVNIRDNPMDGGSLVQPSNEIEKVPKVQVLKPKEDHQPKEDHQPGPRRTSLIHKPWNESEPNVQRMSRIPKRNNHAIDMSRIDIDSLR-----PPPPPPPTLPPPPPPPPPPQFDKVIVNPIAPAAATTERPSTQTPLPQIAVKSYTIASLQQYTNSFSQENLIGSGMLGNVYRAELPDGKLLAVKKLDKRACSQQKDAEFLDLVNHIDQIRHANVVELMGYCAEHGQRLLIYEYCSNGTLQDALHSDDGFKNQLTWNTRIRMALGAARALEYLHEVCEPPIIHRYFKSANVLLDDELSVHVSDCGLARLISSGSVSQLSGNLLTAYGYGAPEFESGIYTSKSDVYSFGVVMLELLTGRKSHDSTRSRAEQFLVRWAIPQLHDIDALSRMVDPSLKGKYPAKSLSHFVDIISRCVQHEPEYRPPMSEVVHDLLEMIRRE 794
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z384 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 959.133 bits (2478), Expect = 0.000e+0
Identity = 530/803 (66.00%), Postives = 624/803 (77.71%), Query Frame = 0
Match: A0A5B6Z384 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 959.133 bits (2478), Expect = 0.000e+0
Identity = 530/803 (66.00%), Postives = 624/803 (77.71%), Query Frame = 0
Query: 1 MGAQRSHMSNLNL-VY--IFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCC--KERGDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKPQDNYLKGPIVSSLAPMPR--EELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPL-PPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
MG +RS ++ L+L +Y +F+ +LI+ S G+TNP DVAAIN+LY A+G P LP W GGDPC DAWQGV+C ++I+SI N AN+ G LGDNLGSF+SIK I LSNN IGG+IP++LP+++Q ++L+DN+FTGSIP SLSS+NQLSAMSLN NQLTG+IPD+FQGLTVLVNLDLSSN L+GQLPPSLE LSSLTT LQNNQLSGTLDVL+DLPLRDLN+ENN FSGPIPE LL+I F+ DGNPFN+++AP PPTSPT P P+S QT K A+GPSAT ++NS KT + TK+IVWISI +IL L L L P CC K DR+ +R+E+APYIG+REN + G L QP +QTEK PK+ V+P++ GP L P+PR +ELN+++MSA PK +DH+IDM+RFDFDS+L PPP PPP P P + V V PI A+ V S+ L PPT V+SY+IA+LQQYTNSFSQENLIGGGMLG+VY AQLP+GKL+AVKKLD+R SQ KDD+FLDLVNSIDKIRHANVVE++GYCAEHG+RLL+YEYCSNGTLQDAL +DDE K SWN+RIRMALGAARAL+YLHE CEP ++HRNFKS NVLL+DEL VHVSDCGLA LISSGSVSQLSG+LLS YGYGAPEFESG+YTS SDVYSFGVVMLELLTGRKSHD TR+R EQFL RWAIPQLHDIDALSRMVDPSL G+YP KSLS FADII RCVQPEPEFRP MSEVVQDL Q+IR++
Sbjct: 1 MGGKRSAINCLDLKIYAQVFVGFMLIYTVRVSRGYTNPGDVAAINNLYAALGYPPLPGWVPSGGDPCADAWQGVQCINTDINSIILNGANLGGQLGDNLGSFSSIKAIGLSNNHIGGSIPSSLPLTIQNVFLSDNQFTGSIPSSLSSLNQLSAMSLNNNQLTGEIPDAFQGLTVLVNLDLSSNNLSGQLPPSLENLSSLTTLHLQNNQLSGTLDVLEDLPLRDLNIENNLFSGPIPENLLNIPNFRKDGNPFNSTIAPLPPPTSPTTPSPAPPLSG-------APSSAQTAGKQ---------AEGPSATEESNS-KTRKFLTTKRIVWISIAGGLLFIILALALFLFRPSCCRGKREADRISKRHEVAPYIGSRENTIDNGPLVQPSNQTEKVPKM-AVRPKEELQTGPRRMGLIPVPRNEQELNMERMSATPKRDDHKIDMSRFDFDSIL-------PPPPPPPPPPPLPPLSTLSEKVIVRPIAAAEVTTVKPSTKSLNPPTFVKSYTIAALQQYTNSFSQENLIGGGMLGSVYRAQLPDGKLLAVKKLDKRALSQQKDDEFLDLVNSIDKIRHANVVELMGYCAEHGERLLIYEYCSNGTLQDALHSDDEFKKKLSWNIRIRMALGAARALEYLHEVCEPSIIHRNFKSVNVLLNDELAVHVSDCGLATLISSGSVSQLSGHLLSAYGYGAPEFESGVYTSKSDVYSFGVVMLELLTGRKSHDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLNGEYPAKSLSHFADIISRCVQPEPEFRPPMSEVVQDLTQMIRKE 778
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z0I6 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 958.748 bits (2477), Expect = 0.000e+0
Identity = 532/803 (66.25%), Postives = 631/803 (78.58%), Query Frame = 0
Match: A0A5B6Z0I6 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 958.748 bits (2477), Expect = 0.000e+0
Identity = 532/803 (66.25%), Postives = 631/803 (78.58%), Query Frame = 0
Query: 1 MGAQRSHMSNLNL-VY--IFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCCKER--GDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKPQDNYLKGPIVSSLAPMPR--EELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPL-PPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKPS--WNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
MG +RS ++ LNL +Y +F+ +LI+ A S G+TNP DVAAIN+LY A+GSP LP W GGDPC DAWQGV+C ++I+SI N AN+ G+LG NLGSF+SI++IDLSNN IG +IP+NLP ++Q +L+DN+FTG+IP SLSS++QLSAMSLN NQLTG+IPD+FQGLT LVNLDLSSN L+GQLPPSLE LSSLTT LQNNQLSGTLDVL+DLPLRDLN+ENN FSGPIPE LL+I F+ DGNPFN+++AP PPTSPT P P+S QT K A+GPSAT ++NS KT + TK+IVWISI VF +IL+L L+L +PRCC+ R DR +R+EIAPYIG+REN + SL QP +QTEK PKV +V+P++ GP L P+PR +ELN+++MSA PK +DH+IDM+RFDFDS+L PPP PPP P P + V V PI+PA+ V S+ L P TTV+SY+IA+LQQYTNSFSQENLIGGGMLG+VY AQLP+GKL+AVKKLD+R SSQ KDD+FLDLVNSID+IRHANVVE++GYCAEHGQRLL+YEYC+NGTLQDAL +DDE K WN RIRMALGAARAL+YLHE CEP ++HRNFKS NVLL+DEL VHVSDCGLA LISSGSVSQLSG+LLS YGYGAPEFESG+YTS SDVYSFGVVMLELLTGRKS+D TR+R E FL RWAIPQLHDIDALSRMVDPSL G+YP KSLS FADII RCVQPEPEFRP MSEVVQDL Q+IR++
Sbjct: 7 MGGKRSAINCLNLEIYAKVFVGFMLIYTARISRGYTNPGDVAAINNLYAALGSPPLPGWVPTGGDPCADAWQGVQCINTDINSIILNGANLGGELGGNLGSFSSIEVIDLSNNHIGDSIPSNLPPTMQNFFLSDNQFTGNIPSSLSSLSQLSAMSLNNNQLTGEIPDAFQGLTELVNLDLSSNNLSGQLPPSLENLSSLTTLHLQNNQLSGTLDVLEDLPLRDLNIENNLFSGPIPENLLNIPNFRKDGNPFNSTIAPLPPPTSPTTPSPAPPLSG-------APSSAQTAGKQ---------AEGPSATEESNS-KTRKFLTTKRIVWISIAGVFLFIILVLGLLLFMPRCCRGRQAADRFSKRHEIAPYIGSRENTTDNESLVQPSNQTEKVPKVAVVRPKEELQTGPRRMGLIPVPRNEQELNMERMSATPKRDDHKIDMSRFDFDSIL-------PPPPPPPPPPPLPPLSTLFEKVIVKPIVPAEITTVKPSTKSLNPSTTVKSYTIAALQQYTNSFSQENLIGGGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLDLVNSIDQIRHANVVELMGYCAEHGQRLLIYEYCNNGTLQDALHSDDEFKKKLLWNTRIRMALGAARALEYLHEVCEPSIIHRNFKSVNVLLNDELAVHVSDCGLATLISSGSVSQLSGHLLSAYGYGAPEFESGVYTSQSDVYSFGVVMLELLTGRKSYDRTRNRGEHFLVRWAIPQLHDIDALSRMVDPSLNGEYPAKSLSHFADIISRCVQPEPEFRPPMSEVVQDLTQMIRKE 785
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8HQQ0 ((protein STRUBBELIG-RECEPTOR FAMILY 3-like {ECO:0000313|RefSeq:XP_016666292.1, ECO:0000313|RefSeq:XP_016666293.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 510/799 (63.83%), Postives = 618/799 (77.35%), Query Frame = 0
Match: A0A1U8HQQ0 ((protein STRUBBELIG-RECEPTOR FAMILY 3-like {ECO:0000313|RefSeq:XP_016666292.1, ECO:0000313|RefSeq:XP_016666293.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 510/799 (63.83%), Postives = 618/799 (77.35%), Query Frame = 0
Query: 1 MGAQRSHMSNLNLVYIFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCC--KERGDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKP-QDNYLKGPIVSSLAPMP-REELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPLPPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
M ++RS M NL IFL +LI+ A S+G TNP DVAAINSLY A+GSP+LP W + GGDPC +AWQGV+C+GS+I SI N AN+ G LGDNLG FASIK ID SNNQIGG IP+NLPV++Q +L+ N+F+GSIPDSLSS+ L+ MSLN N L+G+IPD+FQ L+ L+NLDLS+NKL+G LPPS+E LSSLTT RLQ NQLSGTLDVLQDLPLRDLN+ENN F+GPIPEK+LSI FK+DGNPFN++VAP PTS P A P APP VPASGQTP ++TP + ADGPS + +NS + TK++VWISI SV +IL L L+L +P+C +E + +R+++ Y GNRENL SL QTEKGPK +++P N + + ++A +P +EE NV+++ PK DHEIDM+ +D+ML PPPPPPPP PPP PP PPP + V V PI+P + S+ P P T RS++IA+LQQYTNSFSQENL+GGGMLG+VY A+LP+GKL+AVKKL++RV+SQ KDD+F++LV +ID+I+H NVV ++GYCAEHGQ+LL+YEYCSNG+LQDAL +DDE K SWN RIRMALGAARAL+Y+HE C+PPV+HRNFKS+NVLLDD+L V VSDCGLAPLI+SGSVSQLSG L S YGYGAPEFESGIYTS SDVYSFGV MLELLTGRKSHD TRSR EQFL RWAIPQLHDI+ALSRMVDPSL G+YP K+LSRFADII RCVQ EPEFRP MSEVVQDLL +IRR+
Sbjct: 1 MSSKRSGMEWKNL-NIFLGFLLIYAARISFGLTNPSDVAAINSLYAALGSPLLPGWIASGGDPCAEAWQGVQCNGSDIMSIVLNGANLGGQLGDNLGMFASIKAIDFSNNQIGGNIPSNLPVTMQNFFLSANQFSGSIPDSLSSLTMLTDMSLNNNNLSGEIPDAFQSLSGLINLDLSNNKLSGSLPPSMENLSSLTTLRLQANQLSGTLDVLQDLPLRDLNIENNLFNGPIPEKMLSIPSFKNDGNPFNSTVAPLPGPTS-------PLAPPHAPPRSVVPASGQTPTS---DQTPGKHADGPSVSEGSNSSQKKNFLTTKRVVWISIASVLLFIILALALLLFMPKCSRGREEAGGIFKRHQVGAYRGNRENLVGDASLPTTASQTEKGPKDAVMRPLGGNQTERGRMGAIAKLPNKEERNVERIGTTPKRFDHEIDMS--GYDAMLMEPPPPPPPPPPPPPPPPPPPPPALAEKVIVKPIVPNEVTAGPSAKTPKPSTFARSFTIAALQQYTNSFSQENLLGGGMLGSVYRAELPDGKLLAVKKLEKRVASQQKDDEFIELVENIDRIQHVNVVRLMGYCAEHGQKLLIYEYCSNGSLQDALHSDDEFKKLLSWNTRIRMALGAARALEYMHEACQPPVIHRNFKSANVLLDDDLDVRVSDCGLAPLIASGSVSQLSGQLQSIYGYGAPEFESGIYTSQSDVYSFGVFMLELLTGRKSHDRTRSRGEQFLVRWAIPQLHDIEALSRMVDPSLNGEYPAKALSRFADIISRCVQSEPEFRPPMSEVVQDLLDIIRRE 786
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5D2H8D7 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 508/799 (63.58%), Postives = 618/799 (77.35%), Query Frame = 0
Match: A0A5D2H8D7 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 508/799 (63.58%), Postives = 618/799 (77.35%), Query Frame = 0
Query: 1 MGAQRSHMSNLNLVYIFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCC--KERGDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKP-QDNYLKGPIVSSLAPMP-REELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPLPPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
M ++RS M NL IFL +LI+ A S+G TNP DVAAINSLY A+GSP+LP W + GGDPC +AWQGV+C+GS+I SI N AN+ G LGDNLG FASIK ID SNNQIGG IP+NLPV++Q +L+ N+F+GSIPDSLSS+ L+ MSLN N L+G+IPD+FQ L+ L+NLDLS+NKL+G LPPS+E LSSLTT RLQ NQLSGTLDVLQDLPLRDLN+ENN F+GPIPEK+LSI FK+DGNPFN++VAP PTS P A P APP VPASGQTP ++TP + ADGPS + +NS + TK++VWISI SV +IL L L+L +P+C +E + +R+++ Y GNRENL SL QTEKGPK +++P N + + ++A +P +EE NV+++ PK DHEIDM+ +D+ML PPPPPPPP PPP PP PP + K V V PI+P + S+ P P T RS++IA+LQQYTNSFSQENL+GGGMLG+VY A+LP+GKL+AVKKL++RV+SQ KDD+F++LV +ID+I+H NVV ++GYCAEHGQ+LL+YEYCSNG+LQDAL +DDE K SWN RIRMALGAARAL+Y+HE C+PPV+HRNFKS+NVLLDD+L V VSDCGLAPLI+SGSVSQLSG L S YGYGAPEFESGIYTS SDVYSFGV MLELLTG+KS+D TRSR EQFL RWAIPQLHDI+ALSRMVDPSL G+YP K+LSRFADII RCVQ EPEFRP MSEVVQDLL +IRR+
Sbjct: 1 MSSKRSGMEWKNL-NIFLGFLLIYAARISFGLTNPSDVAAINSLYAALGSPLLPGWIASGGDPCAEAWQGVQCNGSDIMSIVLNGANLGGQLGDNLGMFASIKAIDFSNNQIGGNIPSNLPVTMQNFFLSANQFSGSIPDSLSSLTMLTDMSLNNNNLSGEIPDAFQSLSGLINLDLSNNKLSGSLPPSMENLSSLTTLRLQANQLSGTLDVLQDLPLRDLNIENNLFNGPIPEKMLSIPSFKNDGNPFNSTVAPLPGPTS-------PLAPPHAPPRSVVPASGQTPTS---DQTPGKHADGPSVSEGSNSSQKKNFLTTKRVVWISIASVLLFIILALALLLFMPKCSRGREEAGGIFKRHQVGAYRGNRENLVGDASLPTTASQTEKGPKDAVMRPLGGNQTERGRMGAIAKLPNKEERNVERIGTTPKRFDHEIDMS--GYDAMLMEPPPPPPPPPPPPPPPPPPPPALAEK-VIVKPIVPNEVTAGPSAKTPKPSTFARSFTIAALQQYTNSFSQENLLGGGMLGSVYRAELPDGKLLAVKKLEKRVASQQKDDEFIELVENIDRIQHVNVVRLMGYCAEHGQKLLIYEYCSNGSLQDALHSDDEFKKLLSWNTRIRMALGAARALEYMHEACQPPVIHRNFKSANVLLDDDLDVRVSDCGLAPLIASGSVSQLSGQLQSIYGYGAPEFESGIYTSQSDVYSFGVFMLELLTGKKSYDRTRSRGEQFLVRWAIPQLHDIEALSRMVDPSLNGEYPAKALSRFADIISRCVQSEPEFRPPMSEVVQDLLDIIRRE 785
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P4PSB3 ((protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 {ECO:0000313|RefSeq:XP_017633474.1, ECO:0000313|RefSeq:XP_017633475.1}))
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 508/799 (63.58%), Postives = 617/799 (77.22%), Query Frame = 0
Match: A0A6P4PSB3 ((protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 {ECO:0000313|RefSeq:XP_017633474.1, ECO:0000313|RefSeq:XP_017633475.1}))
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 508/799 (63.58%), Postives = 617/799 (77.22%), Query Frame = 0
Query: 1 MGAQRSHMSNLNLVYIFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCC--KERGDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKP-QDNYLKGPIVSSLAPMP-REELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPLPPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
M ++RS M NL IFL +LI+ A S+G TNP DVAAINSLY A+GSP+LP W + GGDPC +AWQGV+C+GS+I SI N AN+ G LGDNLG FASIK ID SNNQIGG IP+NLPV++Q +L+ N+F+GSIPDSLSS+ L+ MSLN N L+G+IPD+FQ L+ L+NLDLS+NKL+G LPPS+E LSSLTT RLQ NQLSGTLDVLQDLPLRDLN+ENN F+GPIPEK+LSI FK+DGNPFN++VAP PTS P A P APP VPASGQTP ++TP + ADGPS + +NS + TK++VWISI SV +IL L L+L +P+C +E + +R+++ Y GNRENL SL QTEKGPK +++P N + + ++A +P +EE NV+++ PK DHEIDM+ +D+ML PPPPPPPP PPP PP PPP + V V PI+P + S+ P P T RS++IA+LQQYTNSFSQENL+GGGMLG+VY A+LP+GKL+AVKKL++RV+SQ KDD+F++LV +ID+I+H VV ++GYCAEHGQ+LL+YEYCSNG+LQDAL +DDE K SWN RIRMALGAARAL+Y+HE C+PPV+HRNFKS+NVLLDD+L V VSDCGLAPLI+SGSVSQLSG L S YGYGAPEFESGIYTS SDVYSFGV MLELLTGRKS+D TRSR EQFL RWAIPQLHDI+ALSRMVDPSL G+YP K+LSRFADII RCVQ EPEFRP MSEVVQDLL +IRR+
Sbjct: 1 MSSKRSGMEWKNL-NIFLGFLLIYAARISFGLTNPSDVAAINSLYAALGSPLLPGWIASGGDPCAEAWQGVQCNGSDIMSIVLNGANLGGQLGDNLGMFASIKAIDFSNNQIGGNIPSNLPVTMQNFFLSANQFSGSIPDSLSSLTMLTDMSLNNNNLSGEIPDAFQSLSGLINLDLSNNKLSGSLPPSMENLSSLTTLRLQANQLSGTLDVLQDLPLRDLNIENNLFNGPIPEKMLSIPSFKNDGNPFNSTVAPLPGPTS-------PLAPPHAPPRSVVPASGQTPTS---DQTPGKHADGPSVSEGSNSSQKKNFLTTKRVVWISIASVLLFIILALALLLFMPKCSRGREEAGGIFKRHQVGAYRGNRENLVGDASLPTTASQTEKGPKDAVMRPLGGNQTERGRMGAIAKLPNKEERNVERIGTTPKRFDHEIDMS--GYDAMLMEPPPPPPPPPPPPPPPPPPPPPALAEKVIVKPIVPNEVTAGPSAKTPKPSTFARSFTIAALQQYTNSFSQENLLGGGMLGSVYRAELPDGKLLAVKKLEKRVASQQKDDEFIELVENIDRIQHVTVVRLMGYCAEHGQKLLIYEYCSNGSLQDALHSDDEFKKLLSWNTRIRMALGAARALEYMHEACQPPVIHRNFKSANVLLDDDLDVRVSDCGLAPLIASGSVSQLSGQLQSIYGYGAPEFESGIYTSQSDVYSFGVFMLELLTGRKSYDRTRSRGEQFLVRWAIPQLHDIEALSRMVDPSLNGEYPAKALSRFADIISRCVQSEPEFRPPMSEVVQDLLDIIRRE 786
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5D2R9U1 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 949.888 bits (2454), Expect = 0.000e+0
Identity = 509/799 (63.70%), Postives = 618/799 (77.35%), Query Frame = 0
Match: A0A5D2R9U1 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 949.888 bits (2454), Expect = 0.000e+0
Identity = 509/799 (63.70%), Postives = 618/799 (77.35%), Query Frame = 0
Query: 1 MGAQRSHMSNLNLVYIFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCC--KERGDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKP-QDNYLKGPIVSSLAPMP-REELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPLPPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
M ++RS M NL IFL +LI+ A S+G TNP DVAAINSLY A+GSP+LP W + GGDPC +AWQGV+C+GS+I SI N AN+ G LGDNLG FASIK ID SNNQIGG IP+NLPV++Q +L+ N+F+GSIPDSLSS+ L+ MSLN N L+G+IP++FQ L+ L+NLDLS+NKL+G LPPS+E LSSLTT RLQ NQLSGTLDVLQDLPLRDLN+ENN F+GPIPEK+LSI FK+DGNPFN++VAP PTS P A P APP VPASGQTP ++TP + ADGPS + +NS + TK++VWISI SV +IL L L+L +P+C +E + +R+++ Y GNRENL SL QTEKGPK +++P N + + ++A +P +EE NV+++ PK DHEIDM+ +D M PPPPPPPPPP PPP PP PPP + V V PI+P + S+ P P T RS++IA+LQQYTNSFSQENL+GGGMLG+VY A+LP+GKL+AVKKL++RV+SQ KDD+F++LV +ID+I+H NVV ++GYCAEHGQ+LL+YEYCSNG+LQDAL +DDE K SWN RIRMALGAARAL+Y+HE C+PPV+HRNFKS+NVLLDD+L V VSDCGLAPLI+SGSVSQLSG L S YGYGAPEFESGIYTS SDVYSFGV MLELLTGRKS+D TRSR EQFL RWAIPQLHDI+ALSRMVDPSL G+YP K+LSRFADII RCVQ EPEFRP MSEVVQDLL +IRR+
Sbjct: 1 MSSKRSGMEWKNL-NIFLGFLLIYAARISFGLTNPSDVAAINSLYAALGSPLLPGWIASGGDPCAEAWQGVQCNGSDIMSIVLNGANLGGQLGDNLGMFASIKAIDFSNNQIGGNIPSNLPVTMQNFFLSANQFSGSIPDSLSSLTMLTDMSLNNNNLSGEIPEAFQSLSGLINLDLSNNKLSGSLPPSMENLSSLTTLRLQANQLSGTLDVLQDLPLRDLNIENNLFNGPIPEKMLSIPSFKNDGNPFNSTVAPLPGPTS-------PLAPPHAPPRSVVPASGQTPTS---DQTPGKHADGPSVSEGSNSSQKKNFLTTKRVVWISIASVLLFIILALALLLFMPKCSRGREEAGGIFKRHQVGAYRGNRENLVGDASLPTTASQTEKGPKDAVMRPLGGNQTERGRMGAIAKLPNKEERNVERIGTTPKRFDHEIDMSGYDAMLMEPPPPPPPPPPPPPPPPPPPPPPPALAEKVIVKPIVPNEVTAGPSAKTPKPSTFARSFTIAALQQYTNSFSQENLLGGGMLGSVYRAELPDGKLLAVKKLEKRVASQQKDDEFIELVENIDRIQHVNVVRLMGYCAEHGQKLLIYEYCSNGSLQDALHSDDEFKKLLSWNTRIRMALGAARALEYMHEACQPPVIHRNFKSANVLLDDDLDVRVSDCGLAPLIASGSVSQLSGQLQSIYGYGAPEFESGIYTSQSDVYSFGVFMLELLTGRKSYDRTRSRGEQFLVRWAIPQLHDIEALSRMVDPSLNGEYPAKALSRFADIISRCVQSEPEFRPPMSEVVQDLLDIIRRE 788
BLAST of XM_017386869.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5D3A0A7 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 949.888 bits (2454), Expect = 0.000e+0
Identity = 508/799 (63.58%), Postives = 616/799 (77.10%), Query Frame = 0
Match: A0A5D3A0A7 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 949.888 bits (2454), Expect = 0.000e+0
Identity = 508/799 (63.58%), Postives = 616/799 (77.10%), Query Frame = 0
Query: 1 MGAQRSHMSNLNLVYIFLELILIFEAGTSYGFTNPVDVAAINSLYIAVGSPILPRWTSVGGDPCGDAWQGVECDGSNISSIKYNVANMNGDLGDNLGSFASIKIIDLSNNQIGGTIPTNLPVSLQQLYLADNKFTGSIPDSLSSMNQLSAMSLNGNQLTGDIPDSFQGLTVLVNLDLSSNKLTGQLPPSLEGLSSLTTFRLQNNQLSGTLDVLQDLPLRDLNVENNSFSGPIPEKLLSIAIFKSDGNPFNTSVAPSAPPTSPTGSPTLPTARPPAPPFFRVPASGQTPEKAPGNETPSRPADGPSATTDANSKKTNQSSNTKKIVWISIGSVFSVVILLLLLVLLIPRCC--KERGDRVPRRYEIAPYIGNRENLREYGSLEQPFHQTEKGPKVDLVKP-QDNYLKGPIVSSLAPMP-REELNVDKMSAVPKVEDHEIDMTRFDFDSMLPPPPPPPPPPSPPPQLAPPAPPPMPLKSVTVNPILPAQTIPVNSSSGPLPPTTVRSYSIASLQQYTNSFSQENLIGGGMLGNVYTAQLPNGKLVAVKKLDRRVSSQLKDDKFLDLVNSIDKIRHANVVEILGYCAEHGQRLLVYEYCSNGTLQDALLADDESKP--SWNLRIRMALGAARALQYLHEFCEPPVVHRNFKSSNVLLDDELTVHVSDCGLAPLISSGSVSQLSGNLLSTYGYGAPEFESGIYTSMSDVYSFGVVMLELLTGRKSHDSTRSRTEQFLARWAIPQLHDIDALSRMVDPSLQGKYPVKSLSRFADIIFRCVQPEPEFRPLMSEVVQDLLQLIRRD 793
M ++RS M NL IFL +LI+ A S+G TNP DVAAINSLY A+GSP+LP W + GGDPC +AWQGV+C+GS+I SI N AN+ G LGDNLG FASIK ID SNNQIGG IP+NLPV++Q +L+ N+F+GSIPDSLSS+ L+ MSLN N L+G+IPD+FQ L+ L+NLDLS+NKL+G LPPS+E LSSLTT RLQ NQLSGTLDVLQDLPLRDLN+ENN F+GPIPEK+LSI FK+DGNPFN++VAP PTS P A P APP VPASGQTP ++TP + ADGPS + +NS + TK++VWISI SV +IL L L+L +P+C +E + +R+++ Y GNRENL SL QTEKGPK +++P N + + ++A +P +EE NV+++ PK DHEIDM+ +D M PPPPPPPPPP PPP PPA + V V PI+P + S+ P P T RS++IA+LQQYTNSFSQENL+GGGMLG+VY A+LP+GKL+AVKKL++RV+SQ KDD+F++LV +ID+I+H NVV ++GYCAEHGQ+LL+YEYCSNG+LQDAL +DDE K SWN RIRMALGAARAL+Y+HE C+PPV+HRNFKS+NVLLDD+L V VSDCGLAPLI+SGSVSQLSG L S YGYGAPEFESGIYTS SDVYSFGV MLELLTGRKS+D TRSR EQFL RWAIPQLHDI+ALSRMVDPSL G+YP K+LSRFADII RCVQ EPEFRP MSEVVQDLL +IRR+
Sbjct: 1 MSSKRSGMEWKNL-NIFLGFLLIYAARISFGLTNPSDVAAINSLYAALGSPLLPGWIASGGDPCAEAWQGVQCNGSDIMSIVLNGANLGGQLGDNLGMFASIKAIDFSNNQIGGNIPSNLPVTMQNFFLSANQFSGSIPDSLSSLTMLTDMSLNNNNLSGEIPDAFQSLSGLINLDLSNNKLSGSLPPSMENLSSLTTLRLQANQLSGTLDVLQDLPLRDLNIENNLFNGPIPEKMLSIPSFKNDGNPFNSTVAPLPGPTS-------PLAPPHAPPRSVVPASGQTPTS---DQTPGKHADGPSVSEGSNSSQKKNFLTTKRVVWISIASVLLFIILALALLLFMPKCSRGREEAGGIFKRHQVGAYRGNRENLVGDASLPTTASQTEKGPKDAVMRPLGGNQTERGRMGAIAKLPNKEERNVERIGTTPKRFDHEIDMSGYDAMLMEPPPPPPPPPPPPPPPPPPPALA----EKVIVKPIVPNEVTAGPSAKTPKPSTFARSFTIAALQQYTNSFSQENLLGGGMLGSVYRAELPDGKLLAVKKLEKRVASQQKDDEFIELVENIDRIQHVNVVRLMGYCAEHGQKLLIYEYCSNGSLQDALHSDDEFKKLLSWNTRIRMALGAARALEYMHEACQPPVIHRNFKSANVLLDDDLDVRVSDCGLAPLIASGSVSQLSGQLQSIYGYGAPEFESGIYTSQSDVYSFGVFMLELLTGRKSYDRTRSRGEQFLVRWAIPQLHDIEALSRMVDPSLNGEYPAKALSRFADIISRCVQSEPEFRPPMSEVVQDLLDIIRRE 784
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6Z0I9 | E-Value: 0.000e+0, PID: 67.54 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5B6Z1Z9 | E-Value: 0.000e+0, PID: 67.29 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A834LLJ8 | E-Value: 0.000e+0, PID: 64.15 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7141... [more] |
| A0A5B6Z384 | E-Value: 0.000e+0, PID: 66.00 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5B6Z0I6 | E-Value: 0.000e+0, PID: 66.25 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A1U8HQQ0 | E-Value: 0.000e+0, PID: 63.83 | (protein STRUBBELIG-RECEPTOR FAMILY 3-like {ECO:00... [more] |
| A0A5D2H8D7 | E-Value: 0.000e+0, PID: 63.58 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A6P4PSB3 | E-Value: 0.000e+0, PID: 63.58 | (protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 {... [more] |
| A0A5D2R9U1 | E-Value: 0.000e+0, PID: 63.70 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5D3A0A7 | E-Value: 0.000e+0, PID: 63.58 | Protein kinase domain-containing protein {ECO:0000... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |