Resource Type:
Polypeptide
Name:
XM_017363448.1
Identifier:
XM_017363448.1-protein
Sequence:
MKRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEAC
QEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAI
SMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIP
HSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSD
PKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGN
TSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMP
DAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKI
AVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPAS
PGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTAR
GGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLN
GSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAA
RKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQ
RSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSED
EVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGF
TVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIP
RAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQS
DPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQA
GLDYVSCSPFRVPIARLAAAQVAV
Sequence Length:
874
Sequence Checksum:
0d623ea3abba7db8084cd33e49a02518
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017363448.1, derives from mRNA, XM_017363448.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A803Q5D7 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1640.94 bits (4248), Expect = 0.000e+0
Identity = 774/873 (88.66%), Postives = 834/873 (95.53%), Query Frame = 0
Match: A0A803Q5D7 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1640.94 bits (4248), Expect = 0.000e+0
Identity = 774/873 (88.66%), Postives = 834/873 (95.53%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQ+NGK LP+GLWEEI+EGL+ VQ DMG+ LGD PLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGL +KSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELEN+K VKGV+ DTDL+A+DL+ELVEQYK VY++ G KFPSDPK+Q+QLA+ AVFDSWDSPRANKYR+INQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGE+KLYGEFLINAQGEDVVAGIRTPEDL+TMKNCMPDAY+ELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTG+GAVKIAVDMVNEGLVD +AIKMVEPQHLDQLLHPQFE+P+AY DKVVATGLPASPGAA+GQ+VFSAEDAE WHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGC+DIRVND+E++++IG LVI EG+WISLNGSTGEVI+GKQPLSPPA+SSDLETFMSWAD+IR LKVMANADTP+DALAAR NGAEGIGLCRTEHMFFASDERIKAVRKMIMAVT EQRKAAL+LLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLE+IV ELT+ETGM+EDEV++R+E LSEVNPMLGFRGCRLGISY ELTEMQ RAIFQA++S+S+QGF VFPEIMVPLVGTPQEL HQ N++ VA+ VFSEMGSSLSYKVGTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYL++GILQ+DPFEVLDQ+GVGQL+KMATE+GRAARPNLKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVPIARLAAAQVAV
Sbjct: 96 KRVFTFGKGRSEGNKGMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQQNGKKLPEGLWEEIMEGLQAVQNDMGSVLGDPVNPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLGAKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENMKHVKGVQLDTDLSASDLKELVEQYKSVYLETKGEKFPSDPKQQLQLAVKAVFDSWDSPRANKYRNINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGERKLYGEFLINAQGEDVVAGIRTPEDLDTMKNCMPDAYQELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDMVNEGLVDTPSAIKMVEPQHLDQLLHPQFEDPTAYADKVVATGLPASPGAAVGQIVFSAEDAETWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDAERVLIIGGLVINEGEWISLNGSTGEVILGKQPLSPPAMSSDLETFMSWADQIRHLKVMANADTPEDALAARNNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTTEQRKAALNLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVSELTAETGMTEDEVFARVENLSEVNPMLGFRGCRLGISYAELTEMQARAIFQAAVSMSSQGFKVFPEIMVPLVGTPQELGHQANVIRNVAEKVFSEMGSSLSYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSKGILQNDPFEVLDQRGVGQLIKMATEKGRAARPNLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 968
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251LRQ2 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994, ECO:0000256|PIRNR:PIRNR000853} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994, ECO:0000256|PIRNR:PIRNR000853}))
HSP 1 Score: 1633.62 bits (4229), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 831/873 (95.19%), Query Frame = 0
Match: A0A251LRQ2 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994, ECO:0000256|PIRNR:PIRNR000853} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994, ECO:0000256|PIRNR:PIRNR000853}))
HSP 1 Score: 1633.62 bits (4229), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 831/873 (95.19%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK+MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQ+NGK LP+GLWEEILEGL+ V+EDMGA LGD SKPLLLSVRSGAA SMPGMMDTVLNLGLND+VVAGL+ KSGERFAYDSYRRFLDMFG+VVMGIPHSSFEE+LE +K +KGVK DTDLTA DL+ELVEQYKKVY++ATG FPSDPKKQ+QLA+ AVFDSWDSPRA KYRSINQITGLKGTAVNIQ MVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDL+TMK+CMP+AYKELVENC+ILE HYKDMMDIEFTVQENRLWMLQCRSGKRTG+GAVKIAVDMVNEGLVD+R+AIKMVEPQHLDQLLHPQFE+PSAYKDKV+ATGLPASPGA +GQ+VFSA+DAEAWHAQGK ILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGC+DIRVNDSEK+VVIGD VI+EG+WISLNGSTGEVI+GKQPLSPPALS DLETFMSWADEIR++KVMANADTP+DAL AR NGA+GIGLCRTEHMFFASDERIKAVRKMIMAVT QRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLE+IV ELT+ETGM EDEV+SRIEKLSEVNPMLGFRGCRLG+SYPELTEMQ RAIFQA++S+SNQG TV PEIMVPLVGTPQEL HQV L+ +VA VFSEMG +LSYKVGTMIEIPRAALVADEIA AEFFSFGTNDLTQMTFGYSRDDVGKFLPIYL++GILQSDPFEVLDQKGVGQL+KMATE+GRAARP+LKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVPIARLAAAQV V
Sbjct: 83 KRVFTFGKGRSEGNKSMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQQNGKKLPEGLWEEILEGLQSVEEDMGATLGDPSKPLLLSVRSGAATSMPGMMDTVLNLGLNDEVVAGLSLKSGERFAYDSYRRFLDMFGDVVMGIPHSSFEEKLEKMKDIKGVKLDTDLTAHDLKELVEQYKKVYLEATGEVFPSDPKKQLQLAVKAVFDSWDSPRAIKYRSINQITGLKGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLDTMKHCMPEAYKELVENCKILEHHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDMVNEGLVDSRSAIKMVEPQHLDQLLHPQFEDPSAYKDKVIATGLPASPGATVGQIVFSADDAEAWHAQGKCVILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDSEKVVVIGDTVIHEGEWISLNGSTGEVILGKQPLSPPALSGDLETFMSWADEIRRIKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPAQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVSELTTETGMKEDEVFSRIEKLSEVNPMLGFRGCRLGVSYPELTEMQARAIFQAAVSMSNQGVTVLPEIMVPLVGTPQELGHQVTLIRSVADKVFSEMGVTLSYKVGTMIEIPRAALVADEIAKVAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSKGILQSDPFEVLDQKGVGQLIKMATEKGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVVV 955
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251QXP8 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1632.08 bits (4225), Expect = 0.000e+0
Identity = 762/873 (87.29%), Postives = 832/873 (95.30%), Query Frame = 0
Match: A0A251QXP8 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1632.08 bits (4225), Expect = 0.000e+0
Identity = 762/873 (87.29%), Postives = 832/873 (95.30%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQ+NGK LP+GLWEEILEGL+ VQ+DMGA LGD SKPLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGLA+KSGERFAYDSYRRFLDMFG+VVMGIPHSSFEE+LE LK +KGV+ DT+LT +DL+ELVEQYK VY++ G KFPSDPK+Q+ LA+ AVFDSWDSPRANKYRSINQITGLKGTAVNIQ MVFGNMGNTSGTGVLFTRNPSTGE+KLYGEFLINAQGEDVVAGIRTPEDL+TMK+CMP+AYKELVENCEILE+HYKDMMDIEFTVQENRLWMLQCR+GKRTG+GAVKIAVDM NEGLVD AIKMVEPQHLDQLLHPQFE+P+AYKDKV+ATGLPASPGAA+G VVFSA+DAE WH+QGKS ILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGC+DIRVND+EK+ VIG+ VI EG+W+SLNGSTGEVI+GKQPLSPPALS DLETFMSWAD++R+LKVMANADTP+DAL AR NGA+GIGLCRTEHMFFASD+RIKAVR+MIMA T EQRKAAL+LLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDL++IVGELT+ETGM+EDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG +FPEIMVPLVGTPQELRHQV+L+ +VA VFSEMG++LSYKVGTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYL++G+LQ+DPFEVLDQ+GVGQL+KMATE+GRAARP+LKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVPIARLAAAQVAV
Sbjct: 852 KRVFTFGKGKSEGNKGMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQENGKELPKGLWEEILEGLDSVQKDMGAILGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAAKSGERFAYDSYRRFLDMFGDVVMGIPHSSFEEKLEKLKTIKGVELDTELTTSDLKELVEQYKNVYLETKGEKFPSDPKQQLLLAVKAVFDSWDSPRANKYRSINQITGLKGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGERKLYGEFLINAQGEDVVAGIRTPEDLDTMKSCMPEAYKELVENCEILEKHYKDMMDIEFTVQENRLWMLQCRAGKRTGKGAVKIAVDMTNEGLVDQHAAIKMVEPQHLDQLLHPQFEDPTAYKDKVIATGLPASPGAAVGTVVFSADDAETWHSQGKSVILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDTEKVAVIGNTVINEGEWLSLNGSTGEVILGKQPLSPPALSGDLETFMSWADKVRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDDRIKAVRRMIMAATTEQRKAALNLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLDQIVGELTAETGMTEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSMSNQGVKIFPEIMVPLVGTPQELRHQVSLIRSVANKVFSEMGTTLSYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSKGLLQNDPFEVLDQRGVGQLIKMATEKGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 1724
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6M2F914 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1630.92 bits (4222), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 830/873 (95.07%), Query Frame = 0
Match: A0A6M2F914 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1630.92 bits (4222), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 830/873 (95.07%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK MKSLLGGKGANLAEMASIGLSVPPG TISTEAC EYQ+ GK LP GLWEEILEGL+FV++DMGAFLGD SKPLLLSVRSGAAISMPGMMDTVLNLGLND VVAGL++KSGERFAYDS+RRFLDMFG+VVMGIPHSSFEE+LEN+K KGV+ DTDLTAADL+ELVEQYKKVY++ G +FPSDPKKQ+QLA+ AVFDSWDSPRA KYRSINQITGLKGTAVNIQ MVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDL+TMKNCMP AY ELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTG+GAVKIAVDMV+EGLVD R+AIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAA+GQVVFSA+DAE WHAQGKS ILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWG+CCVSGC+DIRVND+EK+V IGD+VI EG+WISLNGSTGEV++GKQPLSPPALS DLETFMSWADEIR++KVMANADTP+DAL AR NGA+GIGLCRTEHMFFASDER+KAVR+MIMAVT EQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLE+IV ELT+ETGM EDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG TV PEIMVPLVGTPQEL HQ+ L+ VAK VFSEM +LSYKVGTMIEIPRAALVADEIA +AEFFSFGTNDLTQMTFGYSRDDVGKFLPIYL++GILQSDPFEVLDQKGVGQL+KMATERGRAARP+LKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVPIARLAAAQVAV
Sbjct: 102 KRVFTFGKGRSEGNKTMKSLLGGKGANLAEMASIGLSVPPGLTISTEACHEYQQIGKKLPLGLWEEILEGLKFVEKDMGAFLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDQVVAGLSAKSGERFAYDSFRRFLDMFGDVVMGIPHSSFEEKLENMKESKGVRLDTDLTAADLKELVEQYKKVYLEVKGEEFPSDPKKQLQLAMTAVFDSWDSPRAIKYRSINQITGLKGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLDTMKNCMPQAYDELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDMVSEGLVDIRSAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAVGQVVFSADDAEEWHAQGKSVILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGRCCVSGCSDIRVNDAEKVVEIGDVVISEGEWISLNGSTGEVVLGKQPLSPPALSGDLETFMSWADEIRRIKVMANADTPEDALRARNNGAQGIGLCRTEHMFFASDERLKAVRRMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVSELTAETGMMEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSMSNQGVTVLPEIMVPLVGTPQELGHQMTLIRNVAKKVFSEMDVTLSYKVGTMIEIPRAALVADEIAKQAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSKGILQSDPFEVLDQKGVGQLIKMATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 974
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4FN93 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1630.92 bits (4222), Expect = 0.000e+0
Identity = 761/873 (87.17%), Postives = 831/873 (95.19%), Query Frame = 0
Match: A0A5E4FN93 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1630.92 bits (4222), Expect = 0.000e+0
Identity = 761/873 (87.17%), Postives = 831/873 (95.19%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQ+NGK LP+GLWEEILEGL+ VQ+DMGA LGD SKPLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGLA+KSGERFAYDSYRRFLDMFG+VVMGIPHSSFEE+LE LK +KGV+ DT+LT +DL+ELVEQYK VY++ G KFPSDPK+Q+ LA+ AVFDSWDSPRANKYRSINQITGL GTAVNIQ MVFGNMGNTSGTGVLFTRNPSTGE+KLYGEFLINAQGEDVVAGIRTPEDL+TMK+CMP+AYKELVENCEILE+HYKDMMDIEFTVQENRLWMLQCR+GKRTG+GAVKIAVDM NEGLVD AIKMVEPQHLDQLLHPQFE+P+AYKDKV+ATGLPASPGAA+G VVFSA+DAE WH+QGKS ILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGC+DIRVND+EK+ VIG+ VI EG+W+SLNGSTGEVI+GKQPLSPPALS DLETFMSWAD++R+LKVMANADTP+DAL AR NGA+GIGLCRTEHMFFASD+RIKAVR+MIMA T EQRKAAL+LLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDL++IVGELT+ETGM+EDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG +FPEIMVPLVGTPQELRHQV+L+ +VA VFSEMG++LSYKVGTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYL++G+LQ+DPFEVLDQ+GVGQL+KMATE+GRAARP+LKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVPIARLAAAQVAV
Sbjct: 882 KRVFTFGKGKSEGNKGMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQENGKELPKGLWEEILEGLDSVQKDMGAILGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAAKSGERFAYDSYRRFLDMFGDVVMGIPHSSFEEKLEKLKTIKGVELDTELTTSDLKELVEQYKNVYLETKGEKFPSDPKQQLLLAVKAVFDSWDSPRANKYRSINQITGLNGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGERKLYGEFLINAQGEDVVAGIRTPEDLDTMKSCMPEAYKELVENCEILEKHYKDMMDIEFTVQENRLWMLQCRAGKRTGKGAVKIAVDMTNEGLVDQHAAIKMVEPQHLDQLLHPQFEDPTAYKDKVIATGLPASPGAAVGTVVFSADDAETWHSQGKSVILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDTEKVAVIGNTVINEGEWLSLNGSTGEVILGKQPLSPPALSGDLETFMSWADKVRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDDRIKAVRRMIMAATTEQRKAALNLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLDQIVGELTAETGMTEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSMSNQGVKIFPEIMVPLVGTPQELRHQVSLIRSVANKVFSEMGTTLSYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSKGLLQNDPFEVLDQRGVGQLIKMATEKGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 1754
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4FN97 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1630.92 bits (4222), Expect = 0.000e+0
Identity = 761/873 (87.17%), Postives = 831/873 (95.19%), Query Frame = 0
Match: A0A5E4FN97 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1630.92 bits (4222), Expect = 0.000e+0
Identity = 761/873 (87.17%), Postives = 831/873 (95.19%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQ+NGK LP+GLWEEILEGL+ VQ+DMGA LGD SKPLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGLA+KSGERFAYDSYRRFLDMFG+VVMGIPHSSFEE+LE LK +KGV+ DT+LT +DL+ELVEQYK VY++ G KFPSDPK+Q+ LA+ AVFDSWDSPRANKYRSINQITGL GTAVNIQ MVFGNMGNTSGTGVLFTRNPSTGE+KLYGEFLINAQGEDVVAGIRTPEDL+TMK+CMP+AYKELVENCEILE+HYKDMMDIEFTVQENRLWMLQCR+GKRTG+GAVKIAVDM NEGLVD AIKMVEPQHLDQLLHPQFE+P+AYKDKV+ATGLPASPGAA+G VVFSA+DAE WH+QGKS ILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGC+DIRVND+EK+ VIG+ VI EG+W+SLNGSTGEVI+GKQPLSPPALS DLETFMSWAD++R+LKVMANADTP+DAL AR NGA+GIGLCRTEHMFFASD+RIKAVR+MIMA T EQRKAAL+LLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDL++IVGELT+ETGM+EDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG +FPEIMVPLVGTPQELRHQV+L+ +VA VFSEMG++LSYKVGTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYL++G+LQ+DPFEVLDQ+GVGQL+KMATE+GRAARP+LKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVPIARLAAAQVAV
Sbjct: 983 KRVFTFGKGKSEGNKGMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQENGKELPKGLWEEILEGLDSVQKDMGAILGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAAKSGERFAYDSYRRFLDMFGDVVMGIPHSSFEEKLEKLKTIKGVELDTELTTSDLKELVEQYKNVYLETKGEKFPSDPKQQLLLAVKAVFDSWDSPRANKYRSINQITGLNGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGERKLYGEFLINAQGEDVVAGIRTPEDLDTMKSCMPEAYKELVENCEILEKHYKDMMDIEFTVQENRLWMLQCRAGKRTGKGAVKIAVDMTNEGLVDQHAAIKMVEPQHLDQLLHPQFEDPTAYKDKVIATGLPASPGAAVGTVVFSADDAETWHSQGKSVILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDTEKVAVIGNTVINEGEWLSLNGSTGEVILGKQPLSPPALSGDLETFMSWADKVRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDDRIKAVRRMIMAATTEQRKAALNLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLDQIVGELTAETGMTEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSMSNQGVKIFPEIMVPLVGTPQELRHQVSLIRSVANKVFSEMGTTLSYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSKGLLQNDPFEVLDQRGVGQLIKMATEKGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 1855
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3AXV8 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1629.38 bits (4218), Expect = 0.000e+0
Identity = 774/873 (88.66%), Postives = 834/873 (95.53%), Query Frame = 0
Match: A0A1S3AXV8 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1629.38 bits (4218), Expect = 0.000e+0
Identity = 774/873 (88.66%), Postives = 834/873 (95.53%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK+MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQ+NG LP GLWEEILEGLE +++DMGA LGD SKPLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGLA+KSGERFAYDSYRRFLDMFGNVVMGI HS FEE+LENLK KG++ DTDLTA+DL+ELVEQYK+VYI+ATG FPSDPK+Q+QLA+ AVF+SWDSPRANKYRSINQITGLKGTAVNIQ+MVFGNMG TSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDL+TMK+ MP+AYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTG+GAVKIAVD+VNEGLVD RTAIKMVEPQHLDQLLHPQFE+PSAYKD+VVATGLPASPGAA+GQ+VFSA+DAEAWHAQGKSAILVR ETSPEDVGGMHAA GILTARGGMTSHAAVVARGWGKCCVSGC+DIRVNDSEK++VIGDLVI EGDWISLNGSTGEVI+GKQPLSPPALS DLETFMSWAD+IR+LKVMANADTP+DAL AR NGA+GIGLCRTEHMFFASDERI+AVRKMIMAVT EQRK+ALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIV LT+ETGMSEDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG V PEIMVPLVGTPQEL+HQV+ + VA+ VFSEMGSS+SYKVGTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIY+++GILQ+DPFEVLDQKGVGQL+K+ATE+GRAARP+LKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVP+ARLAAAQV V
Sbjct: 90 KRVFTFGKGRSEGNKSMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQENGNRLPDGLWEEILEGLESIEKDMGAVLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAAKSGERFAYDSYRRFLDMFGNVVMGISHSLFEEKLENLKIAKGIELDTDLTASDLKELVEQYKEVYIEATGKTFPSDPKQQLQLAVKAVFNSWDSPRANKYRSINQITGLKGTAVNIQSMVFGNMGYTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLDTMKDHMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDLVNEGLVDTRTAIKMVEPQHLDQLLHPQFEDPSAYKDQVVATGLPASPGAAVGQIVFSADDAEAWHAQGKSAILVRAETSPEDVGGMHAATGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDSEKVLVIGDLVINEGDWISLNGSTGEVILGKQPLSPPALSGDLETFMSWADQIRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDERIRAVRKMIMAVTVEQRKSALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVKGLTAETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAISMSNQGIKVLPEIMVPLVGTPQELKHQVSSIRGVAEKVFSEMGSSISYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYISKGILQNDPFEVLDQKGVGQLIKLATEKGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPVARLAAAQVVV 962
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4DSC7 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1627.45 bits (4213), Expect = 0.000e+0
Identity = 774/873 (88.66%), Postives = 834/873 (95.53%), Query Frame = 0
Match: A0A1S4DSC7 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1627.45 bits (4213), Expect = 0.000e+0
Identity = 774/873 (88.66%), Postives = 834/873 (95.53%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK+MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQ+NG LP GLWEEILEGLE +++DMGA LGD SKPLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGLA+KSGERFAYDSYRRFLDMFGNVVMGI HS FEE+LENLK KG++ DTDLTA+DL+ELVEQYK+VYI+ATG FPSDPK+Q+QLA+ AVF+SWDSPRANKYRSINQITGLKGTAVNIQ+MVFGNMG TSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDL+TMK+ MP+AYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTG+GAVKIAVD+VNEGLVD RTAIKMVEPQHLDQLLHPQFE+PSAYKD+VVATGLPASPGAA+GQ+VFSA+DAEAWHAQGKSAILVR ETSPEDVGGMHAA GILTARGGMTSHAAVVARGWGKCCVSGC+DIRVNDSEK++VIGDLVI EGDWISLNGSTGEVI+GKQPLSPPALS DLETFMSWAD+IR+LKVMANADTP+DAL AR NGA+GIGLCRTEHMFFASDERI+AVRKMIMAVT EQRK+ALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIV LT+ETGMSEDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG V PEIMVPLVGTPQEL+HQV+ + VA+ VFSEMGSS+SYKVGTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIY+++GILQ+DPFEVLDQKGVGQL+K+ATE+GRAARP+LKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVP+ARLAAAQV V
Sbjct: 99 KRVFTFGKGRSEGNKSMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQENGNRLPDGLWEEILEGLESIEKDMGAVLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAAKSGERFAYDSYRRFLDMFGNVVMGISHSLFEEKLENLKIAKGIELDTDLTASDLKELVEQYKEVYIEATGKTFPSDPKQQLQLAVKAVFNSWDSPRANKYRSINQITGLKGTAVNIQSMVFGNMGYTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLDTMKDHMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDLVNEGLVDTRTAIKMVEPQHLDQLLHPQFEDPSAYKDQVVATGLPASPGAAVGQIVFSADDAEAWHAQGKSAILVRAETSPEDVGGMHAATGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDSEKVLVIGDLVINEGDWISLNGSTGEVILGKQPLSPPALSGDLETFMSWADQIRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDERIRAVRKMIMAVTVEQRKSALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVKGLTAETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAISMSNQGIKVLPEIMVPLVGTPQELKHQVSSIRGVAEKVFSEMGSSISYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYISKGILQNDPFEVLDQKGVGQLIKLATEKGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPVARLAAAQVVV 971
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1GW52 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1626.68 bits (4211), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 825/873 (94.50%), Query Frame = 0
Match: A0A6J1GW52 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1626.68 bits (4211), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 825/873 (94.50%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK+MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQKNG LP GLWEEILEGLE V++DMGA LGD S PLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGLA KSGERFAYDSYRRFLDMFG+VVMGI HS FEE+LE LK KG DTDLTA+DL+ELVEQYK YI+A G KFPSDPK+Q+QLA+ AVFDSWDSPRANKYRSINQITGLKGTAVNIQ MVFGNMG+TSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDL+TMK CMP+AYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTG+GAVKIAVD+VNEGLVD RTAIKMVEPQHLDQLLHPQFE+PSAYKD+VVATGLPASPGAA+GQ+VFSA+DAEAWHAQGKS ILVRTETSPEDVGGMHAA GILTARGGMTSHAAVVARGWGKCCVSGC+DIRVND EK++VIGDLVI EGDWISLNGSTGEVI+ KQPLSPPALS DLETFMSWAD+IR+LKVMANADTP+DAL AR NGA+GIGLCRTEHMFFASDERI+AVRKMIMAVT EQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIV LT+ETGMSEDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG V PEIMVPLVGTPQELRHQV + VA+ VFSEMGSSLSYK+GTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIY+A+GILQ+DPFEVLDQKGVGQL+K+ATE+GRAARPNLKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVP+ARLAAAQVAV
Sbjct: 91 KRVFTFGKGRSEGNKSMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQKNGNRLPDGLWEEILEGLEIVEKDMGAVLGDPSTPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAVKSGERFAYDSYRRFLDMFGDVVMGISHSLFEEKLEQLKIEKGKALDTDLTASDLKELVEQYKDAYIEAKGEKFPSDPKQQLQLAVKAVFDSWDSPRANKYRSINQITGLKGTAVNIQAMVFGNMGHTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLDTMKACMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDLVNEGLVDTRTAIKMVEPQHLDQLLHPQFEDPSAYKDQVVATGLPASPGAAVGQIVFSADDAEAWHAQGKSVILVRTETSPEDVGGMHAATGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDHEKVLVIGDLVINEGDWISLNGSTGEVILDKQPLSPPALSGDLETFMSWADQIRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDERIRAVRKMIMAVTAEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVKGLTAETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAISMSNQGIKVLPEIMVPLVGTPQELRHQVTSIRGVAEKVFSEMGSSLSYKMGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYIAKGILQNDPFEVLDQKGVGQLIKLATEKGRAARPNLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPVARLAAAQVAV 963
BLAST of XM_017363448.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1IW30 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1626.68 bits (4211), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 826/873 (94.62%), Query Frame = 0
Match: A0A6J1IW30 (Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARBA00011994} (2.7.9.1 {ECO:0000256|ARBA:ARBA00011994}))
HSP 1 Score: 1626.68 bits (4211), Expect = 0.000e+0
Identity = 777/873 (89.00%), Postives = 826/873 (94.62%), Query Frame = 0
Query: 2 KRVFTFGKGNCDGNKAMKSLLGGKGANLAEMASIGLSVPPGFTISTEACQEYQKNGKSLPQGLWEEILEGLEFVQEDMGAFLGDSSKPLLLSVRSGAAISMPGMMDTVLNLGLNDDVVAGLASKSGERFAYDSYRRFLDMFGNVVMGIPHSSFEEELENLKAVKGVKEDTDLTAADLQELVEQYKKVYIKATGGKFPSDPKKQMQLAINAVFDSWDSPRANKYRSINQITGLKGTAVNIQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLNTMKNCMPDAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGQGAVKIAVDMVNEGLVDARTAIKMVEPQHLDQLLHPQFENPSAYKDKVVATGLPASPGAAIGQVVFSAEDAEAWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDSEKLVVIGDLVIYEGDWISLNGSTGEVIMGKQPLSPPALSSDLETFMSWADEIRQLKVMANADTPDDALAARKNGAEGIGLCRTEHMFFASDERIKAVRKMIMAVTHEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVGELTSETGMSEDEVYSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQASLSLSNQGFTVFPEIMVPLVGTPQELRHQVNLVHTVAKTVFSEMGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAQGILQSDPFEVLDQKGVGQLVKMATERGRAARPNLKVGICGEHGGEPSSVAFFAQAGLDYVSCSPFRVPIARLAAAQVAV 874
KRVFTFGKG +GNK+MKSLLGGKGANLAEMASIGLSVPPG TISTEACQEYQKNG LP GLWEEILEGLE V++DMGA LGD S PLLLSVRSGAAISMPGMMDTVLNLGLND+VVAGLA KSGERFAYDSYRRFLDMFG+VVMGI HS FEE+LE LK KG DTDLTA+DL+ELVEQYK YI+A G KFPSDPK+Q+QLA+ AVFDSWDSPRANKYRSINQITGLKGTAVNIQ MVFGNMG+TSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDL+TMK CMP+AYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTG+GAVKIAVD+VNEGLVD RTAIKMVEPQHLDQLLHPQFE+PSAYKD+VVATGLPASPGAA+GQ+VFSA+DAEAWHAQGKS ILVRTETSPEDVGGMHAA GILTARGGMTSHAAVVARGWGKCCVSGC+DIRVND EK++VIGDLVI EGDWISLNGSTGEVI+GKQPLSPPALS DLETFMSWAD+IR+LKVMANADTP+DAL AR NGA+GIGLCRTEHMFFASDERI+AVRKMIMAVT EQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIV LT+ETGMSEDEV+SRIEKLSEVNPMLGFRGCRLGISYPELTEMQ RAIFQA++S+SNQG V PEIMVPLVGTPQELRHQV + VA+ VFSEMGSSL+YK+GTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPIY+A+GILQ+DPFEVLDQKGVGQL+K+ATE+GRAARPNLKVGICGEHGGEPSSVAFFA+AGLDYVSCSPFRVP+ARLAAAQVAV
Sbjct: 91 KRVFTFGKGRSEGNKSMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYQKNGNRLPDGLWEEILEGLEIVEKDMGAVLGDPSTPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAVKSGERFAYDSYRRFLDMFGDVVMGISHSLFEEKLEQLKIEKGKALDTDLTASDLKELVEQYKDAYIEAKGEKFPSDPKQQLQLAVKAVFDSWDSPRANKYRSINQITGLKGTAVNIQAMVFGNMGHTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLDTMKACMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDLVNEGLVDTRTAIKMVEPQHLDQLLHPQFEDPSAYKDQVVATGLPASPGAAVGQIVFSADDAEAWHAQGKSVILVRTETSPEDVGGMHAATGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDHEKVLVIGDLVINEGDWISLNGSTGEVILGKQPLSPPALSGDLETFMSWADQIRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDERIRAVRKMIMAVTAEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVKGLTAETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAISMSNQGIKVLPEIMVPLVGTPQELRHQVTSIRGVAEKVFSEMGSSLNYKMGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYIAKGILQNDPFEVLDQKGVGQLIKLATEKGRAARPNLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPVARLAAAQVAV 963
| Match Name | Stats | Description |
|---|---|---|
| A0A803Q5D7 | E-Value: 0.000e+0, PID: 88.66 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A251LRQ2 | E-Value: 0.000e+0, PID: 89.00 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A251QXP8 | E-Value: 0.000e+0, PID: 87.29 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A6M2F914 | E-Value: 0.000e+0, PID: 89.00 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A5E4FN93 | E-Value: 0.000e+0, PID: 87.17 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A5E4FN97 | E-Value: 0.000e+0, PID: 87.17 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A1S3AXV8 | E-Value: 0.000e+0, PID: 88.66 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A1S4DSC7 | E-Value: 0.000e+0, PID: 88.66 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A6J1GW52 | E-Value: 0.000e+0, PID: 89.00 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
| A0A6J1IW30 | E-Value: 0.000e+0, PID: 89.00 | Pyruvate, phosphate dikinase {ECO:0000256|ARBA:ARB... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |