XM_017361504.1

Resource Type: 
Polypeptide
Name: 
XM_017361504.1
Identifier: 
XM_017361504.1-protein
Sequence: 
MEIDMHGDKFDECWKFDEFSGMCEGMSDEIVVVKNESGVKVEEVNEEDEA
KPIMGSIAERRAGFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPT
ALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMMQSAAGAADTDGDCDV
SSSLSYKLAGLPCVSELADKPPIDFKCPAKYLRETATDNCATGSTAYAVN
LSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQK
EAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVE
RSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGIESTASGINV
EGGAVWRNFQLGFKDTKVGTDGLERTSSTSVLTEISDILSNTRGKSMGAF
ESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCI
IETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYY
KCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAAS
LPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYV
VGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSV
LPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDGQLHQNDLKF
VEPKVEKDDNLYGSSLPISDQANSASSSMFHQINGKFPS
Sequence Length: 
739
Sequence Checksum: 
d6a48ff88bf81d591361a4ec9849fd00
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017361504.1, derives from mRNA, XM_017361504.1.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZR97 ((Putative WRKY transcription factor 2 {ECO:0000313|EMBL:MPA45961.1}))

HSP 1 Score: 781.941 bits (2018), Expect = 0.000e+0
Identity = 419/702 (59.69%), Postives = 508/702 (72.36%), Query Frame = 0
 
Query:   55 GSIAERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMM-QSAAGAADTDGDCDVSSSLSYKLAGLP----CVSELADKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGI-ESTASGINVEGGAVWRNFQLGFKDTKVGTD----GLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQAN--SASSSMFHQINGKFPS 739
            GSIAERRA   GF+A +I + RFR   SP+SSP+ RSPYLTIP GISPTALLDSP+ML NSQA   SPTTGT+  P+ N ES+M  S   AA+ D   DV S L +   G P    C+ +L  +P +DF+ P K+ +E+AT NC+T S+A    +S+D + N     LK S HT    +QM    E  +  D     LLEG +K  YPP+  +RTSED YNWRKYGQKQVKGSEYPRSYYKCT  NC+VKKKVERS DGQITEIIYKGAHNHPKPQP+RR+I G  FS +E + + E   SG+ VEGGAVWRN QLG KD KV +D    GLERTSSTSV+TEISD LS T+GKS+G FES GTPE SST ASHD D+EDGATQGS+SL +DA+DGESE KRR+KDS +IETN  SR  REPR+VVQIESE+D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERAS NLK VITTYEGKH HEVPAARNS  ANS   ++ L   SN+QP ++L R TN PK E  VPD++ HFER P   N +M P ++GN   DMKFGAPS+YQ+K PPLP++M +GS++ NP+H +  +A S++ V+P +  SLP+ I  S N+     D + +GK +  V  FL G QL +ND++ ++PK E KDD LY + LPI D AN  S+SSS++ +I G +PS
Sbjct:   82 GSIAERRAAKCGFNAARISMARFRST-SPLSSPAARSPYLTIPPGISPTALLDSPIMLPNSQA-QPSPTTGTFTLPTLNQESLMLSSVTSAANGDRGNDVGSFLKFNPHGSPVSLQCILDLEVQPQMDFEFP-KFSKESATKNCSTESSADK-KVSKDMVLNANCLTLK-SCHTGISGNQMPQHREPVHEEDAGSHHLLEGDEKGTYPPMGMVRTSEDVYNWRKYGQKQVKGSEYPRSYYKCTHPNCKVKKKVERSHDGQITEIIYKGAHNHPKPQPNRRSIGGSPFSFNEMAEMGERIGSGVKVEGGAVWRNIQLGCKDIKVDSDWRADGLERTSSTSVVTEISDPLSTTQGKSIGVFESVGTPEHSSTLASHDDDEEDGATQGSISLGDDADDGESELKRRKKDSSLIETNFPSRALREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASQNLKCVITTYEGKHNHEVPAARNSGHANSGVGNI-LPAASNTQPALTLPRNTNVPKLETQVPDLSFHFERKPELGNEYMGPSLLGNFRNDMKFGAPSIYQMKFPPLPSTMPYGSFIPNPNHGETHSASSIAPVVPDFQMSLPLPISRSVNMALGAFDFNNHGKPIGPVQSFLGGQQLRENDIRLLKPKQEQKDDGLYDTRLPIVDHANGSSSSSSVYCRIMGNYPS 777    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZN82 ((Putative WRKY transcription factor 2 {ECO:0000313|EMBL:MPA45962.1}))

HSP 1 Score: 776.933 bits (2005), Expect = 0.000e+0
Identity = 421/703 (59.89%), Postives = 508/703 (72.26%), Query Frame = 0
 
Query:   53 IMGSIAERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHES-MMQSAAGAADTDGDCDVSSSLSYKL----AGLPCVSELADKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGIESTASGINVEGGAVWRNFQLGFKDTKVGTD----GLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQAN--SASSSMFHQINGKFPS 739
            + GSIAERRA   GF+A +I+  RFR   SP+SSP+ RSPYLTIP GISPTALLDSP+ML NSQA   SPTTGT+     NHES  + S   A D D   D +SSL +K       LPC+S L  KP IDF+ P ++ +E AT N AT S++  + +S+D + N    AL+ S HT+  S+QM    E  +G D    RLLEG QK  YPP+   RTSEDGYNWRKYGQKQVKGSE+PRSYYKCT  NCQVKKKVERS DGQITEIIYKGAHNHPKPQP+RR+I+G  FS +E S +       N  GGAVWRN QLG KD KV +D    GLERTSSTSV+TE+SD LS T+GK M  FES+GTPELSST ASHD D+EDGATQGS+SL +DA+DGESE KRR+KDS +IETN  SR  REPR+VVQIESE+D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERAS NLK VITTYEGKH HEVPAARNS  ANS   ++ L   SN+QP ++L R TN PK E  VPD++ HFER P   N +M P ++GN   DMKFGAPS+YQ+K PPLP++M +GS++ NP+H +  +A S++ V+P +  SLP+ I  S N+     D + +GK +  V  FL G QL +ND++ ++PK E KDD LY + LPI D AN  S+SSS++ +I G +PS
Sbjct:   81 LGGSIAERRAAKCGFNAARINTARFRST-SPLSSPAARSPYLTIPPGISPTALLDSPMMLPNSQA-QPSPTTGTFTVTPLNHESSTLNSLTPATDGDRGSD-ASSLHFKPHESPVSLPCISGLEIKPQIDFEFP-EFPKEAATKNFATESSS-DIKVSKDLVLNANCLALQ-SCHTSITSNQMPQHREPVHGDDAGAHRLLEGGQKGTYPPMGMGRTSEDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSHDGQITEIIYKGAHNHPKPQPNRRSIVGSPFSFNELSDMGER----NGSGGAVWRNIQLGCKDIKVDSDWRADGLERTSSTSVVTEVSDPLSTTQGKCMSLFESAGTPELSSTLASHDDDEEDGATQGSISLGDDADDGESELKRRKKDSSLIETNFPSRALREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASQNLKCVITTYEGKHNHEVPAARNSGHANSGVGNI-LPAASNTQPALTLPRNTNVPKLETQVPDLSFHFERKPELGNEYMGPSLLGNFRNDMKFGAPSIYQMKFPPLPSTMPYGSFIPNPNHGETHSASSIAPVVPDFQMSLPLPISRSVNMALGAFDFNNHGKPIGPVQSFLGGQQLRENDIRLLKPKQEQKDDGLYDTRLPIVDHANGSSSSSSVYCRIMGNYPS 772    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B8B9 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8538878.1}))

HSP 1 Score: 764.992 bits (1974), Expect = 0.000e+0
Identity = 408/690 (59.13%), Postives = 495/690 (71.74%), Query Frame = 0
 
Query:   49 EAKPIMGSIAERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMM-QSAAGAADTDGDCDVSSSLSYKLAGLP----CVSELADKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGI-ESTASGINVEGGAVWRNFQLGFKDTKVGTD----GLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQAN 723
            EA    GSIAERRA   GF+A +I+   FR      S  + RSPYLTIP GISPTALLDSP+ML NSQA   SPTTGT+  P  NHES+M  S   A D D   DV SSL +K  G P    C+S L  +P +DF+   ++ +E A  NCAT  +A  + + ++ I N    AL+ S HT    +QM    +  +  D   + LLEG QK  YPP+   RTSEDGYNWRKYGQKQVKGSEYPRSYYKCT  NCQVKKKVERS DGQITEIIYKGAHNHPKPQP+RR+++G  FS SE + + E   SG+ VEGGAVWRN QLG KD KV +D    GLERTSSTSV+TEISD LS T+GKSMG FES GTPELSST ASHD D+EDGATQGS+SL +DA+DGESE KRR+KD  ++ETNL+SR  REPR+VVQIES++D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERAS +LK VITTYEGKH HEVPAARNS  ANS   ++ L   SN+QP+++L+R  N PK E  VPD++L FER P     FMR  ++G+ G DMKFGAPS+Y++K PPLP++M +GS+L N +H +  +A S++ V+P +  SLP+ IP S N+     D + +GK + SV  F+ G QL +ND++ ++PK E KDD LY + LPI D AN
Sbjct:   68 EASSSGGSIAERRAAKCGFNAARINTALFRSSSPLSSP-AARSPYLTIPPGISPTALLDSPIMLPNSQA-QPSPTTGTFMVPPLNHESLMLHSVTSATDGDRGSDVGSSLKFKPHGSPVSLTCISGLEIQPHMDFEF-LEFPKEAAKKNCATELSA-DIEVPKNLILNANCLALQ-SCHTGITGNQMPQHRKPVHEEDAG-AHLLEGDQKGTYPPVAVARTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHDGQITEIIYKGAHNHPKPQPNRRSMVGSPFSFSEMTEMGERNGSGVKVEGGAVWRNIQLGCKDIKVDSDWRADGLERTSSTSVVTEISDPLSTTQGKSMGVFESVGTPELSSTLASHDDDEEDGATQGSISLGDDADDGESELKRRKKDCSLLETNLASRALREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASQDLKCVITTYEGKHNHEVPAARNSGHANSGVGNI-LPAASNTQPSLTLTRNANVPKLETQVPDLSLRFERKPKLGTEFMRTGLLGDFGNDMKFGAPSIYRMKFPPLPSTMPYGSFLPNLNHGESHSASSIAPVVPDFPMSLPLAIPQSVNMALGAFDFNNHGKPIGSVQSFIGGQQLRENDIRLLKPKQEQKDDGLYDTRLPIVDHAN 750    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZQZ8 ((Putative WRKY transcription factor 2 {ECO:0000313|EMBL:MPA45958.1}))

HSP 1 Score: 756.133 bits (1951), Expect = 0.000e+0
Identity = 414/702 (58.97%), Postives = 502/702 (71.51%), Query Frame = 0
 
Query:   53 IMGSIAERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHES-MMQSAAGAADTDGDCDVSSSLSYKL----AGLPCVSELADKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGIESTASGINVEGGAVWRNFQLGFKDTKVGTD----GLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQANSASSSMFH-QINGKFPS 739
            + GSIAERRA   GF+A +I+  RFR   SP+SSP+ RSPYLTIP GISPTALLDSP+ML NSQA   SPTTGT+     NHES  + S   A D D   D +SSL +K       LPC+S L  KP IDF+ P ++ +E AT N AT S++  + +S+D + N    AL+ S HT+  S+QM    E  +G D    RLLEG QK  YPP+   RTSEDGYNWRKYGQKQVKGSE+PRSYYKCT  NCQVKKKVERS DGQITEIIYKGAHNHPKPQP+RR+I+G  FS +E S +       N  GGAVWRN QLG KD KV +D    GLERTSSTSV+TE+SD LS T+GK M  FES+GTPELSST ASHD D+EDGATQGS+SL +DA+DGESE KRR+KDS +IETN  SR  REPR+VVQIESE+D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERAS NLK VIT+YEGKH HEVPAARNSS  NS   ++ L   SN++ T++LS      KPE  V D+AL+FER P   N FM+P  +GN G D+KFGA  +YQ+K PPLP+++ +GS+++NP+H +   A S++ V+P +  SLP+ IP S NI   G D + +GK + S+   L G QL +ND + ++PK E KD+ LY + LP+ D AN  SSS  + +I   FPS
Sbjct:   81 LGGSIAERRAAKCGFNAARINTARFRST-SPLSSPAARSPYLTIPPGISPTALLDSPMMLPNSQA-QPSPTTGTFTVTPLNHESSTLNSLTPATDGDRGSD-ASSLHFKPHESPVSLPCISGLEIKPQIDFEFP-EFPKEAATKNFATESSS-DIKVSKDLVLNANCLALQ-SCHTSITSNQMPQHREPVHGDDAGAHRLLEGGQKGTYPPMGMGRTSEDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSHDGQITEIIYKGAHNHPKPQPNRRSIVGSPFSFNELSDMGER----NGSGGAVWRNIQLGCKDIKVDSDWRADGLERTSSTSVVTEVSDPLSTTQGKCMSLFESAGTPELSSTLASHDDDEEDGATQGSISLGDDADDGESELKRRKKDSSLIETNFPSRALREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASQNLKCVITSYEGKHNHEVPAARNSSHVNSGVGNV-LPAASNTRRTLTLST-----KPEAEVQDLALNFERKPELGNEFMKPNSLGNFGNDLKFGASFIYQMKFPPLPSTLPYGSFVLNPNHGETHPASSIAPVVPDFPMSLPLPIPRSANIALGGFDFNNHGKPVQSI---LGGKQLRENDTRLLKPKQEQKDECLYDTGLPVVDHANRLSSSSINCRIMRSFPS 763    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A386IPT2 ((WRKY transcription factor 55 {ECO:0000313|EMBL:AYD59714.1}) (WRKY transcription factor SUSIBA2-like {ECO:0000313|RefSeq:XP_015875770.1}))

HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0
Identity = 381/702 (54.27%), Postives = 484/702 (68.95%), Query Frame = 0
 
Query:   59 ERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMMQSAAGAADTD---------GDCD---VSSSLSYKLAGLPCVSELADKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGI-ESTASGINVEGGAVWRNFQLGFKDTKVG----TDGLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQANSASSSMFHQINGKFP 738
            ERRA   GF+A +I   RFR   SP++SP+ RSP LTIP GISPTALLDSP+ML NSQA   SPTTGT+  PSF HES + ++    D D         GD       SS   +   +   + + ++P +DF+ PA++  E  +  C   S+   V +S   I N      +R    +  +DQ  L  E ++  DT    L EG QK +YP +  ++TSEDGYNWRKYGQKQVKGSEYPRSYYKCT  NCQVKKKVERS DGQITEIIYKGAHNH KPQP+RRA LG  FS  E S + E + + + VEGG+VW N Q    + + G    TDGLERTSSTSV+T++SD LS T+GKS+G FES+ TPELSST ASHD D+EDGATQGS+ L EDA+D ESESKRR+K+ C+IETNL+SR  REPR+VVQIESE+D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERASHNLK VITTYEGKH HEVPAARNS+  NS + ++P    +N QP++++ R  + PKPE  V D+A  F+R P   N ++RP   GN   DMKFGAPS+YQ+K PPL   MS+ S+ +NP+      A S++ V+P +  SLP+ +P SG+++  G D + +GK   SV P L G QL ++D+KF+ PK E KDDN+Y +    ++ ++ +SSS+++++ G FP
Sbjct:   43 ERRAAKCGFNAERISTARFRTT-SPLASPAARSPCLTIPPGISPTALLDSPIMLPNSQAL-PSPTTGTFPLPSFYHESSILNSMTREDGDKGSFRFKPHGDVKHLSRHSSFENQQVEVDYQALVLEQPQMDFEFPAEFPGEATSKYCVVNSSN-DVKVSNSMIINANCVNQQRCP-VDMATDQTLLSREPTHHEDTGTDNLSEGNQKGSYPSVGMVKTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHDGQITEIIYKGAHNHAKPQPNRRAALGSTFSLDEMSEMGEGSGTCVKVEGGSVWTNIQ-STTEIRHGSEGRTDGLERTSSTSVITDLSDPLSTTQGKSVGVFESAETPELSSTLASHD-DEEDGATQGSILLGEDADDEESESKRRKKECCLIETNLASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKCVITTYEGKHNHEVPAARNSNHINSSSGNVP-PAAANGQPSLTV-RNAHIPKPETQVQDLAPQFDRKPEFSNEYLRPTFPGNFANDMKFGAPSIYQMKFPPLQGVMSYASFGLNPNRNTTQQAGSIAPVMPDFPMSLPLNLPSSGSLSMVGFDFN-SGKQFASVQPILSGQQLQESDMKFLRPKQEQKDDNIYDAL--ATNASSLSSSSVYNRVMGNFP 733    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P5C280 ((WRKY domain containing protein {ECO:0000313|EMBL:PON55178.1}))

HSP 1 Score: 683.715 bits (1763), Expect = 0.000e+0
Identity = 389/743 (52.36%), Postives = 491/743 (66.08%), Query Frame = 0
 
Query:   39 VKVEEVNEEDEAKPIMG-------SIAERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMMQSAAG--AADTDGDCDVSSSLSYKLAG----LPCVSELA-------------DKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGI-ESTASGINVEGGAVWRNFQLGFKDTKVG----TDGLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVEKDDNL-YGSSLPISDQANS------ASSSMFHQINGKFPS 739
            +   E  E++E   +M        SIAERRA   GF+A KI+  RFR   SP++SP+ RSP LTIP GISPTALLDSP+ML NSQA   SPTTGT+  PSF+HES + ++A     D  G  +   S  +K  G    LP  S                ++  +DF+ PA++  E  T  C   S    V +    + + +    K S   +  SDQ SL  ++ +G     + L EG Q  +YP    +RTSEDGYNWRKYGQKQVKGSEYPRSYYKCT  NCQVKKKVERS DGQITEIIYKGAHNH KPQP+RRA  G  FS  E S + E + + + VEGG+ W N Q G  D K+G    TDG+E TSSTSV+TE+SD LS   GKS+G  ES+ TPELSST ASH+ DDEDGATQGS+SL  DA+D +SE+KRR+K+SC+IETNL+SR  REPR+VVQIESE+D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERASHNLK VITTYEGKH HEVPAARN +  NS  A++P    +N+QP ++L R TN PKPE  + D A HF+R P   N ++RP   GN   D++FGA S YQ+K PPL + + + S+ +NP+        SV+S +P +  SLPM +  SG++   G D + +GKS+  V P L G QL +ND +F+ PK E++D + Y + LP++D AN+      +SSS++++I G FPS
Sbjct:   22 IPASEKEEDEEGMGLMAAVKGGGTSIAERRAAKFGFNAVKINTARFRTT-SPLASPAARSPCLTIPPGISPTALLDSPIMLPNSQAL-PSPTTGTFPLPSFHHESSILNSATREGGDNGGGAE---SFRFKPYGDFRSLPGFSTFGNQQTDTQGQAIVLEQSSMDFEFPAEFPGEATTKYCVDSSNG--VKILNSMMIDAKCVDKKMS--PDVTSDQTSLSRKSVHGECNATNDLSEGNQSGSYPSAGMVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHDGQITEIIYKGAHNHAKPQPNRRATPGSAFSFDEMSEVSEGSGTCLKVEGGSAWTNIQSGSTDIKLGSDGRTDGMEITSSTSVVTELSDPLSTIHGKSIGTIESADTPELSSTVASHE-DDEDGATQGSISLGGDADDEDSEAKRRKKESCLIETNLTSRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKCVITTYEGKHNHEVPAARNGNHMNSSGANVP-PAANNAQPALTLPRNTNIPKPETHIQDFAPHFDRKPEF-NEYLRPSFAGNFSNDVRFGASSFYQMKFPPLQHPIPYTSFGLNPNRIATQQGASVASFVPDFPMSLPMNLAPSGSL--VGFDFN-SGKSVAPVPPLLSGQQLQENDTRFLRPKQEQNDEIVYDACLPLADNANAPSLSSLSSSSVYNRIMGSFPS 749    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5XQW1 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4316099.1}))

HSP 1 Score: 679.863 bits (1753), Expect = 0.000e+0
Identity = 387/721 (53.68%), Postives = 484/721 (67.13%), Query Frame = 0
 
Query:   56 SIAERRA---GFDAPKIDVVRFRGVGSPVSSPSG--RSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMMQSAAGAADTDGDCDVSSSLSYKLAG----LPCVSELA-------------DKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGA-HNHPKPQPSRRA--ILGCQFSPSETSGI-ESTASGINVEGGAVWRNFQLGFKDTKVGTDG----LERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQANS-----ASSSMFHQINGKFPS 739
            SIAERRA   GF+A +I+  RFR   SP+ SP+   RSP LTIP GISPTALLDSP+ML NSQA   SPTTGT+     N +S +  +    D     D  SS ++K  G    LP  S                ++ PIDF+ P ++  E    N A   + +  NL+   I N     L+RS +++  S+Q SL  E  +G D      LEG+ + +YP    +RTSEDGYNWRKYGQKQVKGSEYPRSYYKCT  NCQVKKKVERS DGQITEIIYKGA HNH  PQP+RRA   LG  FS  ETS + E + + + VEGG+VW N Q G KD K G DG    LERTSSTSV+T++SD LS T+GKSM  FES+ TPE SST ASHD  D+D  TQGS+SL +DA+D ESESKRR+K+SC+IE +++SR  REPR+VVQIESE+D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERASHNLK VITTYEGKH HEVPAARNS+  NS   +      +N+QP ++L R++N PKPE  V D+A HF+R P     ++R   +GN   D+KFG PS+YQ+K PPL N+M + S+ ++ +H          SV+P +  SLP+ +P SGN+  SG D + NGKS+  V P+  G QL ++D++F++PK E KDDNLY + LPI DQAN+     +SS ++ +I G +PS
Sbjct:   30 SIAERRAAKCGFNAERINTARFRTT-SPLPSPAAAARSPCLTIPPGISPTALLDSPMMLPNSQAL-PSPTTGTFPLLPPNDDSSVLKSGTHEDGHRGSDFGSSFTFKRQGDPKYLPGFSSFENQGSTVDYQSLVLEQQPIDFEFPMEFPEEANAKNYAVDPSTHVKNLNSG-ILNANCVDLQRS-NSSAASEQNSLPKEPIHGEDVGSHPFLEGEHRGSYPSAGMVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSFDGQITEIIYKGAPHNHAMPQPNRRAGASLGSSFSFDETSEMSEGSRASVKVEGGSVWTNIQSG-KDIKTGYDGRAEGLERTSSTSVVTDLSDPLSTTQGKSMSIFESAETPEFSSTLASHD--DDDRGTQGSISLGDDADDEESESKRRKKESCLIEPSIASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKFVITTYEGKHNHEVPAARNSNHINSNGGNA-HPSTANAQPALALPRSSNNPKPETQVQDLAPHFDRKPEFHEEYLRSSFLGNFNNDLKFGVPSIYQMKYPPLQNTMPYSSFGLHANHG---VTHQAGSVVPDFPISLPLNLPPSGNLPLSGFDFN-NGKSVCPVQPYFSGQQLQEDDIRFLKPKQEQKDDNLYDACLPIIDQANASLSSSSSSLLYQRIMGGYPS 738    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5VCY4 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4285567.1}))

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 387/721 (53.68%), Postives = 484/721 (67.13%), Query Frame = 0
 
Query:   56 SIAERRA---GFDAPKIDVVRFRGVGSPVSSPSG--RSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMMQSAAGAADTDGDCDVSSSLSYKLAG----LPCVSELA-------------DKPPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGA-HNHPKPQPSRRA--ILGCQFSPSETSGI-ESTASGINVEGGAVWRNFQLGFKDTKVGTDG----LERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQANS-----ASSSMFHQINGKFPS 739
            SIAERRA   GF+A +I+  RFR   SP+ SP+   RSP LTIP GISPTALLDSP+ML NSQA   SPTTGT+     N +S +  +    D     D  SS ++K  G    LP  S                ++ PIDF+ P ++  E    N A   + +  NL+   I N     L+RS +++  S+Q SL  E  +G D      LEG+ + +YP    +RTSEDGYNWRKYGQKQVKGSEYPRSYYKCT  NCQVKKKVERS DGQITEIIYKGA HNH  PQP+RRA   LG  FS  ETS + E + + + VEGG+VW N Q G KD K G DG    LERTSSTSV+T++SD LS T+GKSM  FES+ TPE SST ASHD  D+D  TQGS+SL +DA+D ESESKRR+K+SC+IE +++SR  REPR+VVQIESE+D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERASHNLK VITTYEGKH HEVPAARNS+  NS   +      +N+QP ++L R++N PKPE  V D+A HF+R P     ++R   +GN   D+KFG PS+YQ+K PPL N+M + S+ ++ +H          SV+P +  SLP+ +P SGN+  SG D + NGKS+  V P+  G QL ++D++F++PK E KDDNLY + LPI DQAN+     +SS ++ +I G +PS
Sbjct:   24 SIAERRAAKCGFNAERINTARFRTT-SPLPSPAAAARSPCLTIPPGISPTALLDSPMMLPNSQAL-PSPTTGTFPLLPPNDDSSVLKSGTHEDGHRGSDFGSSFTFKRQGDPKYLPGFSSFENQGSTVDYQSLVLEQQPIDFEFPMEFPEEANAKNYAVDPSTHVKNLNSG-ILNANCVDLQRS-NSSAASEQNSLPKEPIHGEDVGSHPFLEGEHRGSYPSAGMVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSFDGQITEIIYKGAPHNHAMPQPNRRAGASLGSSFSFDETSEMSEGSRASVKVEGGSVWTNIQSG-KDIKTGYDGRAEGLERTSSTSVVTDLSDPLSTTQGKSMSIFESAETPEFSSTLASHD--DDDRGTQGSISLGDDADDEESESKRRKKESCLIEPSIASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKFVITTYEGKHNHEVPAARNSNHINSNGGNA-HPSTANAQPALALPRSSNNPKPETQVQDLAPHFDRKPEFHEEYLRSSFLGNFNNDLKFGVPSIYQMKYPPLQNTMPYSSFGLHANHG---VTHQAGSVVPDFPISLPLNLPPSGNLPLSGFDFN-NGKSVCPVQPYFSGQQLQEDDIRFLKPKQEQKDDNLYDACLPIIDQANASLSSSSSSLLYQRIMGGYPS 732    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A650C3B5 ((WRKY transcription factor 12 {ECO:0000313|EMBL:QGQ64035.1}))

HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0
Identity = 380/715 (53.15%), Postives = 479/715 (66.99%), Query Frame = 0
 
Query:   53 IMGSIAERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMMQSAAGAADTDGDCDVSSSLSYKLAG-------LPCVSELADKPPID------------FKCPAKYLRETATDNCATGSTAYAVNLSEDTIFNVRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGIES-TASGINVEGGAVWRNFQLGFKDTKVGT----DGLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDAEDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSLYQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQANSASSSMFHQINGKFP 738
            + GSIAERRA   GF+A +I   RFR   SP++SP+ RSP LTIP GISPTALLDSP+ML NSQA   SPTTG++Q P  NHE  M +   + D +   +V SS  +K  G        P +   A +  ID            F+ P   L+E   ++ A GS    + +S D I N      +   H++   DQ     E  +  D      LEG+Q+EA P    +R+SEDGYNWRKYGQKQVKGSEYPRSYYKCT  NCQVKKKVERS DGQITEIIYK AHNHPKPQPSRR+ LG  FS +E + +   + S    EG +V  NFQ G ++ KV +    DGLERTSSTSV+T++SD +S T+GKS+GAFES+ TPELSST ASHD D+ED ATQGS+SL +DA++ ESESKRR+K+SC+IE NLSSR  REPR+VVQIES++D+LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGC VRKHVERASHNLKSVITTYEGKH HEVPAARNSSQ+NS  A+LP   VS++   ++L R     KPE  + D+  HFER P    +F+RP   GN   DMKFGA SL+Q++ PPL N M +GS+ +NP+ T   +     + +P +  S+PM  P S N+     D + +GK +  V P + G QL + D++F+ PK E KD+NLYG++   +   +S+S+S++ QI G +P
Sbjct:   65 VRGSIAERRAAKCGFNAVRISTPRFRTT-SPLASPAARSPCLTIPPGISPTALLDSPIMLANSQA-QPSPTTGSFQLPPLNHECPMLNPVSSGDGNRSNNVGSSFRFKPHGNHIPFPHYPGLESEALETSIDYQPAEPANQSTNFEFPVDLLKEANAEDHAIGS-PNDLKISSDMIVNANCIPFQTC-HSDVAPDQFFQQKEPIDVEDVGTHNTLEGEQREACPTAGIVRSSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHDGQITEIIYKAAHNHPKPQPSRRSALGSGFSSNEMAEMAGGSGSCDKAEGWSVSANFQPGSREIKVSSNWRGDGLERTSSTSVVTDLSDPISTTQGKSVGAFESADTPELSSTLASHD-DEEDQATQGSISLGDDADEDESESKRRKKESCLIEANLSSRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKSVITTYEGKHNHEVPAARNSSQSNSNGANLPPP-VSHASANLTLPRNATIAKPETSIQDLVPHFERKPEFNTDFLRPSFFGN---DMKFGASSLHQMRFPPLQNPMPYGSFGLNPNIT---SQTHSMTHVPDFPMSMPMGFPQSANVGPGSFDFNSHGKPISLVQPLVGGQQLKETDMRFIRPKQEQKDENLYGTN---ASSTSSSSASLYCQIMGSYP 764    
BLAST of XM_017361504.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EYY8 ((WRKY DNA-binding protein 2, putative isoform 1 {ECO:0000313|EMBL:EOY09878.1}))

HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0
Identity = 376/726 (51.79%), Postives = 478/726 (65.84%), Query Frame = 0
 
Query:   56 SIAERRA---GFDAPKIDVVRFRGVGSPVSSPSGRSPYLTIPAGISPTALLDSPVMLLNSQAAHSSPTTGTYQSPSFNHESMMQSAAGAADTDGDCDVSSSLSYKLAGL---PCVSELADK----------------------PPIDFKCPAKYLRETATDNCATGSTAYAVNLSEDTIFN--VRSTALKRSRHTNTESDQMSLFSETSNGVDTEVSRLLEGQQKEAYPPLETLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQQNCQVKKKVERSLDGQITEIIYKGAHNHPKPQPSRRAILGCQFSPSETSGI-ESTASGINVEGGAVWRNFQLGFKDTKVGTD----GLERTSSTSVLTEISDILSNTRGKSMGAFESSGTPELSSTFASHDGDDEDGATQGSVSLEEDA-EDGESESKRRRKDSCIIETNLSSRTTREPRIVVQIESEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKSVITTYEGKHTHEVPAARNSSQANSVAASLPLDHVSNSQPTVSLSRTTNAPKPEPPVPDIALHFERNPAARNNFMRPYVVGNLGTDMKFGAPSL---YQVKLPPLPNSMSFGSYLMNPDHTDPPAACSVSSVLPGYSFSLPMTIPGSGNINQSGVDLSCNGKSMDSVHPFLDG-QLHQNDLKFVEPKVE-KDDNLYGSSLPISDQANSAS-SSMFHQINGKFPS 739
            SIAERRA   GF A +I   RFR   SP++SPS RSPYLTIP GISPTALLDSP+ML N+Q    SPTTGT+  P  NH+S + + +     D   ++ SS ++K   L   P  S L D+                      PP+DF+ PA++ ++ ++ N A      AV++++  + N  V   A      +   SD+M +  E   G D   + L EG QK     +   RTSEDGYNWRKYGQKQVKGSEYPRSYYKCT  NCQVKKKVERSLDGQITEIIYKGAHNHPKP P RR  +G   S  E S I E   + + VEGG +WRN Q G +D K+G+D    GLERTSSTSV+T++SD LS  +GKS GAFE + TPE SST ASHD D++D ATQGS+SL +DA  D ESESKRR+ +SC+ E N +S   REPR+VVQIES++D+LDDGYRWRKYGQKVVKGNPNPRSYYKCT+ GCPVRKHVERASHNLK V+TTY+GKH HEVPAAR+SS  NS   +LP   V N+Q  ++L+R TNA KPE P+ DI   F++ P  +N ++RP  + +   +MK GA SL   YQ+K P + N++ +GS+ +NP+      + S++S +P +  SLP+  P S N++ +G D++  GKS    H FL G QL ++  +F+  K E KDDNLY   LPI D A+++S SS+F Q NG FPS
Sbjct:   45 SIAERRAATCGFKAERISTARFRASTSPLASPSARSPYLTIPPGISPTALLDSPIMLPNAQV---SPTTGTFPVPFLNHDSQVLNPSNG---DRGSNIVSSFTFKPQNLDSQPSFSSLEDQVSSSFNLVQSAEVHCQRLAKLEPPLDFEFPAEFSKKASSMNSA------AVSVADVKVLNDIVNDNANLGFHPSELASDEMPMPKEPLLGQDVN-THLSEGDQKGINTAMGMARTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLDGQITEIIYKGAHNHPKPLPCRRPSIGSTLSSDEMSEIAEGGGTCVKVEGGLIWRNAQAGSRDIKLGSDWRADGLERTSSTSVVTDLSDPLSTAQGKSFGAFELAETPEFSSTLASHDDDNDDRATQGSISLCDDAANDDESESKRRKTESCLTEMNATSGALREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTPGCPVRKHVERASHNLKCVLTTYDGKHNHEVPAARSSSHVNSSGCNLP-PTVPNTQAALALARNTNALKPETPIQDIVPPFDQKPEFKNEYLRPSFLRDFSNEMKLGAASLASVYQMKFPSIQNTIPYGSFGVNPNCIAAHQSGSLASTVPNFPMSLPLNHPTSANLSLAGFDINNGGKSTGPTHSFLPGQQLKESTTRFLGIKQEVKDDNLYNPCLPIVDHASASSLSSVFQQANGNFPS 756    
Match NameStatsDescription
A0A5B6ZR97E-Value: 0.000e+0, PID: 59.69(Putative WRKY transcription factor 2 {ECO:0000313... [more]
A0A5B6ZN82E-Value: 0.000e+0, PID: 59.89(Putative WRKY transcription factor 2 {ECO:0000313... [more]
A0A5J5B8B9E-Value: 0.000e+0, PID: 59.13(Uncharacterized protein {ECO:0000313|EMBL:KAA8538... [more]
A0A5B6ZQZ8E-Value: 0.000e+0, PID: 58.97(Putative WRKY transcription factor 2 {ECO:0000313... [more]
A0A386IPT2E-Value: 0.000e+0, PID: 54.27(WRKY transcription factor 55 {ECO:0000313|EMBL:AY... [more]
A0A2P5C280E-Value: 0.000e+0, PID: 52.36(WRKY domain containing protein {ECO:0000313|EMBL:... [more]
A0A6J5XQW1E-Value: 0.000e+0, PID: 53.68(Uncharacterized protein {ECO:0000313|EMBL:CAB4316... [more]
A0A6J5VCY4E-Value: 0.000e+0, PID: 53.68(Uncharacterized protein {ECO:0000313|EMBL:CAB4285... [more]
A0A650C3B5E-Value: 0.000e+0, PID: 53.15(WRKY transcription factor 12 {ECO:0000313|EMBL:QG... [more]
A0A061EYY8E-Value: 0.000e+0, PID: 51.79(WRKY DNA-binding protein 2, putative isoform 1 {E... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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