Publications with Phylogenetic Trees

A species tree listing all organisms represented in CarrotOmics that have an NCBI taxonomy ID number assigned can be viewed here.

To reach the trees from any of the publication links below, on the publication page click on the Analysis links. The Study link will be all trees from the publication, other Analysis links will be individual trees. From the Analysis page click on the "Phylogenetic Tree" link.

Year Publication Phylogenetic Trees
2004An ITS-based phylogenetic analysis of the perennial, endemic Apiaceae subfamily Apioideae of western North America
  1. TreeBASE Tree Tr1694
2004A phylogenetic study of Perideridia (Apiaceae) based on nuclear ribosomal DNA ITS sequences
  1. TreeBASE Tree Tr1693
2005Molecular systematics of the trans-Pacific alpine genus Oreomyrrhis (Apiaceae): phylogenetic affinities and biogeographic implications.
  1. TreeBASE Tree Tr4547
  2. TreeBASE Tree Tr491
2005Monophyly and major clades of Meryta (Araliaceae)
  1. TreeBASE Tree Tr2083
  2. TreeBASE Tree Tr2084
  3. TreeBASE Tree Tr2085
  4. TreeBASE Tree Tr2086
  5. TreeBASE Tree Tr237
2006The evolutionary history of Sium sensu lato (Apiaceae): dispersal, vicariance, and domestication as inferred from ITS rDNA phylogeny.
  1. TreeBASE Tree Tr4594
2007Inclusion of the South Pacific alpine genus Oreomyrrhis (Apiaceae) in Chaerophyllum based on nuclear and chloroplast DNA sequences
  1. TreeBASE Tree Tr738
  2. TreeBASE Tree Tr739
  3. TreeBASE Tree Tr740
  4. TreeBASE Tree Tr741
  5. TreeBASE Tree Tr742
  6. TreeBASE Tree Tr743
2007Intercontinental disjunctions in Cryptotaenia (Apiaceae, Oenantheae): an appraisal using molecular data
  1. TreeBASE Tree Tr2761
2008Phylogenetic position of the genus Ferula (Apiaceae) and its placement in tribe Scandiceae as inferred from nrDNA ITS sequence variation
  1. TreeBASE Tree Tr3014
  2. TreeBASE Tree Tr3015
2008A Phylogenetic Study of Oxypolis and Ptilimnium (Apiaceae) Based on Nuclear rDNA ITS Sequences
  1. TreeBASE Tree Tr2924
2008A molecular phylogeny of Chinese Apiaceae subfamily Apioideae inferred from nuclear ribosomal DNA internal transcribed spacer sequences
  1. TreeBASE Tree Tr5063
2013Molecular phylogeny of Daucus (Apiaceae)
  1. TreeBASE Tree Tr60728
2014New insights into domestication of carrot from root transcriptome analyses.
  1. TreeBASE Tree Tr78026
2014Phylogenomics of the carrot genus (Daucus, Apiaceae).
  1. TreeBASE Tree Tr71398
  2. TreeBASE Tree Tr71399
  3. TreeBASE Tree Tr71400
  4. TreeBASE Tree Tr71401
  5. TreeBASE Tree Tr71402
  6. TreeBASE Tree Tr71403
2016Integrated Molecular and Morphological Studies of the Daucus guttatus Complex (Apiaceae)
  1. TreeBASE Tree Tr89356
2017Entire plastid phylogeny of the carrot genus (Daucus, Apiaceae): Concordance with nuclear data and mitochondrial and nuclear DNA insertions to the plastid.
  1. TreeBASE Tree Tr98472
  2. TreeBASE Tree Tr98473
  3. TreeBASE Tree Tr98474
  4. TreeBASE Tree Tr98475
  5. TreeBASE Tree Tr98476
  6. TreeBASE Tree Tr98477
  7. TreeBASE Tree Tr98478
  8. TreeBASE Tree Tr98479
  9. TreeBASE Tree Tr98480
  10. TreeBASE Tree Tr98481
  11. TreeBASE Tree Tr98482
  12. TreeBASE Tree Tr98483
  13. TreeBASE Tree Tr98484
  14. TreeBASE Tree Tr98485
  15. TreeBASE Tree Tr98486
  16. TreeBASE Tree Tr98487
  17. TreeBASE Tree Tr98488
  18. TreeBASE Tree Tr98489
  19. TreeBASE Tree Tr98490
  20. TreeBASE Tree Tr98491
  21. TreeBASE Tree Tr98492
  22. TreeBASE Tree Tr98493
  23. TreeBASE Tree Tr98494
  24. TreeBASE Tree Tr98495
  25. TreeBASE Tree Tr98496
2019Extended studies of interspecific relationships in Daucus (Apiaceae) using DNA sequences from ten nuclear orthologues
  1. TreeBASE Tree Tr115096
2020Parallel evolution of arborescent carrots (Daucus) in Macaronesia.
  1. TreeBASE Tree Tr119314
2021Impact of Genomic and Transcriptomic Resources on Apiaceae Crop Breeding Strategies.
  1. 10.3390/ijms22189713 Figure 4 Plastid
  2. 10.3390/ijms22189713 Figure 4 rbcL