Chromosome-level genome assembly of Cnidium monnieri genome annotation

We inferred gene functions based on the best match of the alignments to the National Center for Biotechnology Information (NCBI) Non-Redundant, TrEMBL, InterPro, and Swiss-Prot protein databases using BLASTP (NCBI BLAST v2.11.0+) and the Kyoto Encyclopedia of Genes and Genomes database with an E-value threshold of 1E-5. We annotated the protein domains using PfamScan (pfamscan_version) and InterProScan (v5.50–84.0) based on the InterPro protein databases. We identified the motifs and domains within the gene models using PFAM databases. We obtained Gene Ontology IDs for each gene using Blast2GO. We functionally annotated approximately 97.02% of the predicted C. monnieri protein-coding genes with known genes, conserved domains, and Gene Ontology terms.

Genome annotation has not yet been released publicly.