Oenanthe virgata Tunisia

Resource Type: 
Germplasm Accession
Accession: 
Ames 30293
Cross Reference: 
GRIN AccessionLoading content
Organism: 
Name: 
Oenanthe virgata Tunisia
Identifier: 
Ames 30293
Alias: 
  • Tun327
  • PS 0809
Description: 

Synonyms:PS 0809:Tun327; COLLECTED 08/18/2009 Beja, Tunisia by Spooner, D., USDA, ARS; Simon, P., USDA, ARS, Vegetable Crops Research Unit; Rouz, S., Tunisian National Gene Bank (BNG); Ghrabi, Z., Tunisian National Gene Bank (BNG); Hannachi, C., Institut Superiore de Agronomique. DONATED 10/20/2009 Wisconsin, United States by Simon, P., USDA, ARS, Vegetable Crops Research Unit

Geographic Location: 
LatitudeUncertainty (±)LongitudeUncertainty (±)Altitude (m)Uncertainty (±)Description
36.7972229.026111445Tunisia: Route 11, 41 km from Eudiana, 254 km from Beja.
Biomaterial: 
NameDescription
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Publication: 
  1. Spooner DM, Ruess H, Iorizzo M, Senalik D, Simon P. Entire plastid phylogeny of the carrot genus (Daucus, Apiaceae): Concordance with nuclear data and mitochondrial and nuclear DNA insertions to the plastid.. American journal of botany. 2017 Feb; 104(2):296-312.
  2. Arbizu C, Ruess H, Senalik D, Simon PW, Spooner DM. Phylogenomics of the carrot genus (Daucus, Apiaceae).. American journal of botany. 2014 Oct; 101(10):1666-85.
Relationship: 
There are 3 relationships.
Relationships
The sample, Ames_30293_12ncax01_SD:DAUCUS.AMES.OBS.2013, is sample of accession, Oenanthe virgata Tunisia.
The sample, Ames_30293_11ncai01_SD:NC7.INVENTORY.BRENNER, is sample of accession, Oenanthe virgata Tunisia.
The sample, Ames_30293_09ncao01_SD:NC7.INVENTORY.BRENNER, is sample of accession, Oenanthe virgata Tunisia.
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Project: 
NameDescription
TreeBASE study 15477: A phylogenomic study of Daucus. There are six analyses from this study providing six trees available in CarrotOmics.
None of these trees is present in the referenced publication. None of the trees in the referenced publication are in TreeBASE.
Note that publication title is different than the TreeBASE study title.
TreeBASE Study S19872. This study contains 25 trees. One tree (Tr98472) corresponds to figure 2 in the reference publication, the remaining trees are supplementary information.

Traits evaluated: ANTHER COLOR (ANTHERCOL); BRACT LENGTH (BRACTLEN); NUMBER OF BRACT POINTS (BRACTPNTS); BRACT WIDTH (BRACTWID); BRACT LOBE PAIRS (BRCTLOBPAR); FLOWER RAY NUMBER (FLWRAYNUM); FOLIAGE COLOR (FOLIAGECOL); INVOLUCRAL BRACT POSITION (INVOLBRACT); LEAF PUBESCENCE (LEAFPUBE); LEAF TYPE (LEAFTYPE); MATURE LEAF LENGTH (MATLEAFLEN); MATURE LEAF WIDTH (MATLEAFWID); MATURE PETIOLE LENGTH (MATPETLENG); MATURE PETIOLE THICKNESS (MATPETTHK); PIGMENTED CENTRAL UMBEL COLOR (PCUCOLOR); PIGMENTED CENTRAL UMBEL (PCUPRESENT); PEDUNCLE PUBESCENCE (PEDUNCPUB); PETAL COLOR (PETALCOLOR); PETIOLE HAIRINESS (PETIOLHAIR); PETIOLE SHAPE (PETIOLSHP); PETAL LENGTH CENTRAL (PETLENCEN); PETAL LENGTH PERIPHERAL (PETLENPER); PLANT HEIGHT (PLANTHEIGH); PRIMARY UMBEL FLOWER HEIGHT (PRIMFLWHT); PRIMARY UMBEL DIAMETER (PRIMUMDIAM); SECONDARY UMBEL DIAMETER (SECUMBDIAM); SEED LENGTH (SEEDLENGTH); SEED WIDTH (SEEDWIDTH); SPINE CURVATURE (SPINECURV); HAIRS AT BASE OF PRIMARY SPINE (SPINEHAIRS); SPINE CONFLUENCY (SPNCONFLU); LENGTH OF SECONDARY RIB SPINES (SPNSECLENG); NO. OF SPINES ON SECONDARY RIB (SPNSECRBNO); BARBS AT TIPS OF SPINES (SPNTIPBARB); STAMEN LENGTH (STAMENLENG); STEM DIAMETER (STEMDIAM); STIPULE WIDTH (STIPULWIDT); STYLE LENGTH (STYLELENGH); STYLOPODIUM LENGTH (STYLPODLEN); STYLOPODIUM WIDTH (STYLPODWID); UMBEL SHAPE - FULL BLOOM (UMBELSHPFB); UMBEL SHAPE - MATURE SEED (UMBELSHPMT)

Evaluation location: Iowa, United States. Method: Daucus descriptor data recorded from observation planting Field N-10 at the NCRPIS farm (42 degrees 0 minutes N latitude 93 degrees 30 minutes W longitude).

Traits evaluated: HUNDRED SEED WEIGHT (100SEEDWGT); COMMENT (COMMENT)

Evaluation location: Iowa, United States. Method: Observation extracted from the seed inventory records in GRIN. The inventory for these crops is maintained by the seed storage staff at the North Central Regional Plant Introduction Station.

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Analysis: 
NameDescription

TreeBASE Tree Tr71398 from study S15477. Original tree name "Tree1". This tree is not present in the publication

TreeBASE Tree Tr71399 from study S15477. Original tree name "Tree2". This tree is not present in the publication

TreeBASE Tree Tr71400 from study S15477. Original tree name "Tree3". This tree is not present in the publication

TreeBASE Tree Tr71401 from study S15477. Original tree name "Tree4". This tree is not present in the publication

TreeBASE Tree Tr71402 from study S15477. Original tree name "Tree5". This tree is not present in the publication

TreeBASE Tree Tr71403 from study S15477. Original tree name "Tree6". This tree is not present in the publication

TreeBASE Tree Tr98472 from study S19872. This tree corresponds to figure 2 in the referenced publication

TreeBASE Tree Tr98473 from study S19872. Original tree name "PAUP_2". This is a supplemental tree not present in the referenced publication.
TreeBASE Tree Tr98474 from study S19872. Original tree name "PAUP_3". This is a supplemental tree not present in the referenced publication.
TreeBASE Tree Tr98475 from study S19872. Original tree name "PAUP_4". This is a supplemental tree not present in the referenced publication.
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Feature: 
NameUniquenameFeature Type
S15477_Oenanthe_virgata_A30293
S15477_Oenanthe_virgata_A30293
DNA
S19872_Oenanthe_virgata_Ames_30293
S19872_Oenanthe_virgata_Ames_30293
DNA
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Stock Center: 
GRIN Accession
Data Year: 
2009
Image File: 
There are 22 images.
ImageAnnotations
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2011-08-03
  • File Name: Ames_30293_09ncao01_SD_PL_CL_2011-08-03_01.jpg
  • legend: Close-up image; Aug 03, 2011; Brenner, David, Iowa State University
  • photo provider: Brenner, David, Iowa State University
  • sample: Ames 30293 09ncao01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2011-10-31
  • File Name: Ames_30293_09ncao01_SD_PL_CL_2011-10-31_01.jpg
  • legend: Close-up image; Oct 31, 2011; Brenner, David, Iowa State University
  • photo provider: Brenner, David, Iowa State University
  • sample: Ames 30293 09ncao01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2012-04-12
  • File Name: Ames_30293_09ncao01_SD_PL_GH_2012-04-12_01.jpg
  • legend: Image of plant in the greenhouse; Apr 12, 2012; Brenner, David, Iowa State University
  • photo provider: Brenner, David, Iowa State University
  • sample: Ames 30293 09ncao01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2012-05-30
  • File Name: Ames_30293_09ncao01_SD_PL_LV_2012-05-30_01.jpg
  • legend: Scanned image of Daucus leaves; May 30, 2012; Reitsma, Kathleen, Iowa State University
  • photo provider: Reitsma, Kathleen, Iowa State University
  • sample: Ames 30293 09ncao01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2012-05-30
  • File Name: Ames_30293_09ncao01_SD_PL_LV_2012-05-30_04.jpg
  • legend: Scanned image of Daucus leaves; May 30, 2012; Reitsma, Kathleen, Iowa State University
  • photo provider: Reitsma, Kathleen, Iowa State University
  • sample: Ames 30293 09ncao01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_30293_12ncax01_SD_PL_LV_2013-07-02_01.jpg
  • legend: plant
  • sample: Ames 30293 12ncax01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_30293_12ncax01_SD_PL_LV_2013-07-02_02.jpg
  • legend: plant
  • sample: Ames 30293 12ncax01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_30293_12ncax01_SD_PL_UM_2013-07-02_01.jpg
  • legend: umbel
  • sample: Ames 30293 12ncax01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_30293_12ncax01_SD_PL_UM_2013-07-02_02.jpg
  • legend: umbel
  • sample: Ames 30293 12ncax01 SD
  • accession: Ames 30293
  • comments: GRIN Image
  • dataset name: GRIN Image
  • date: 2013-07-02
  • File Name: Ames_30293_12ncax01_SD_PL_UM_2013-07-02_03.jpg
  • legend: umbel
  • sample: Ames 30293 12ncax01 SD
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