DCARv3 Resistance Gene Annotation

Resource Type: 
File
File Type: 
GFF3
Download: 
Download File NameAvailable atSizeMD5
29.suptable19.gff3.gzCarrotOmics196.78KB08a0e5386cf171bd0b5b71045de0fa1c
Description: 

PRGdb 3.0 was used to predict disease resistant genes. This is the GFF3 file used for JBrowse. See the linked analysis below for further details.

References: 
The following records refer to this file:
Analysis
Project
Project: 
NameDescription
Improved Hybrid de novo Genome Assembly, Gene Prediction and Annotation of Carrot

The project goals are to improve the assembly of the genome of cultivated carrot, and improve gene predictions using this improved assembly.
Analysis: 
NameDescription
Carrot Genome Assembly DH1 v3.0 Resistance Gene Annotation

PRGdb 3.0, a comprehensive platform for prediction and analysis of plant disease resistance genes, was used to predict the disease resistant genes in v3 as well as the v2 for the comparison purposes. The data from this analysis is presented in supplementary table S19 in the carrot genome publication.
License: 
NameAttribution 4.0 International (CC BY 4.0)
License Summary

You are free to:

  • Share: copy and redistribute the material in any medium or format

  • Adapt: remix, transform and build upon the material for any purpose, even commercially.

The licensor cannot revoke these freedoms as long as you follow the following license terms:

  • Attribution You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.

  • No additional restrictions You may not apply legal terms or technological measures that legally restrict others from doing anything the license permits

Notices:

  • You do not have to comply with the license for elements of the material in the public domain or where your use is permitted by an applicable exception or limitation.

  • No warranties are given. The license may not give you all of the permissions necessary for your intended use. For example, other rights such as publicity, privacy, or moral rights may limit how you use the material.
Full Legal Texthttps://creativecommons.org/licenses/by/4.0/legalcode