DCAR_011386 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_011386

Identifier:

DCAR_011386.gene

Locus Tag:

DCAR_011386

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 4 relationships.
Relationships
The mRNA, DCAR_011386, is a part of gene, DCAR_011386.
The genetic_marker, MK007602 TP180362, is located in gene, DCAR_011386.
The genetic_marker, MK001090 GSSR-091, is located in gene, DCAR_011386.
The genetic_marker, MK007600 TP118009, is located in gene, DCAR_011386.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_011386	DCAR_011386.mRNA	mRNA	DCARv2_Chr3:35344337..35352798

Sequence:

ATGTATTCCTTTCAGGCTAGTGGCAGGAAGGAACCAGTCAGGTATCTATT
GTGGATTAGATTAAGCCGGGCTGTCAGAGTGACCGAATTATTTGAGAAAT
TAGAAAAAGATATTCGTGTCAATTATCTTTTTACAAGGATCATCAAACTT
TTTGTTGTTGAGCTCTATTGCACGCATACAGCTGCTTGCATATTTTACTA
TCTGGCTACTACACTGCCACCGGCACAGGAAGGTTATACATGGATAGGAA
GTTTAAAGATGGGTGACTACAATTACTCTCATTTCAGAGATATTGATCTT
TGGACGCGCTACATTACATCATTATATTTTGCCATTGTTACGATGGCAAC
TGTTGGTAATATTTTCTGAAATCATCTGCATTGCTTAAACATATTGTGTT
GCTTATGATTGTTCATATTTCTCTTGACATATTCAATTGGTATGACATTA
GATAAGTGATGCATCTAGATGTGGGATCCCTTAGATGTTGCTCCCAATGT
TGTAAATTCATGATTGTTTTTTTCTCTTCCATACCTGGGGGTCATTTGTT
AAATCTGAACCATGTTTTCTGAACAGTTAAAATATTTGGATGATCTGAGC
GAATAGTTATTATGCCAATCTGAATCAGTAATGTTGTTTGCTAAATTTAA
TGTAAATTATCTGGAAGGTTGCAATTTACTTTTATACCCTGCTAAATGAT
TAATAGTGTTTGACAGGTAATCTATTTTATCACTTGAATGATACTAATTT
TTATTTTCAGTCAATTAGATATTAGAAAAACCAATAAACAAAATTAGAGT
GTTTATATAATTATTAAATTCTTCAGTCGTAAAAATAACCAAAAAAGAAA
TCTTTGAAAGTTGCAACTTGCAAAGCAATTTGATCACAAATATCATTCAT
ACATTGTGCAGCTTGTGTTCCCCATTGGGTAGGTGTACCTTAGATAGGTG
ATGCAGGACAAGCAAGGGAGATTATTTTTTTTAAGTGCAACTAAAACATG
GGTGAGCTGAAAGAAGGATTAATAGTTATCATGTATCAAAGGTTTTTGCC
TTAAGTTTATTGTAGGATTTCGAAAAGATAAGCATACTAAAGGATATTTG
TGTCATTAACGATGTGTTATATGCAACCATAAATATACAGATCATGATTC
CAGGTTGAAGTACATAAAAATGACGAAAGTTAATAATCGGTTGCAGAGAC
TCCAAATTAAAGATGATTTCATCCCAAAACATAGCAAATTCTTGTCAACT
AATTCTCAGTGACTTCAGAAAAGCTCTCATTTAGTAATCCATAAATTCTT
GATCATTTTGTGCATTTAATTTTTTTTAACACGATTGCTTGTTTTGCCTT
GCACTCTATTCCTATGTAAATGCACTCTGCTATATGTTCCTGTTACAGGT
TACGGAGATGTACATGCAGTGAATAACAGGGAAATGATATTCATCATGAT
TTTTGTCTCCTTGGACATGATTCTTGGTGCGTATTTACTTGGTAATATGG
CTGCACTGATCGTAAAAGGATCAAAAACTGAGAAGTTTAGAGATAAGATG
TCAGACCTTTTGGAATACATGAACCGAAAGAAACTGGGTAAGCAGATATT
TAATGAGATAAAAGGCCATGTACAATCACAATATGCGAACAGTTGCACAG
AGGCTGCTGTCCTCCAGGATATTCCAATTTCCTTTCGAGCCAGGGTATTT
TTCTGAAACTGCATACCTTGACATTCTAATTGTAGTTATTTATGTTCTTA
TGGCTTGATAACTACTCAGACATTTTGCTGAGGAGAACCCCCTCCCTATT
ATTAAAAAGCAATACAAAACTAGCTGAATCAGGAACAGATGTTACATGTA
GCCCTTATGTATTGCTTTATTGAGCGGGTACCAAGATGGCTACATGATGC
ATTCTGATATTCTGAGGAACTGTTTTCTCATATTTACTGATGATATTTCT
GTCTTAACCTGGTATATGATATCACACTATGTTTAACTTGAAGTCTGCCA
TACTCCCATCATTTATATTTCACAAAAGAAACTTCAGTACAAAGTGCTCA
GTTCCTTTTGCAAAATTACAACAAACATCTTGTACTCTTTGGTGTATTGA
CTGCAAAGTTTCAAGGAACATCTTGTACTCTTTGGTACGTTGACTGTAAA
ATTTCCATGCAGATCTCAGAAAGGTTATACGTGCCGTATATAAGGGAGGT
TCCTATTTTCAAGGGTTGCTCATCTGGATTCGTTAAACAGATAGTAAGTT
ACTTCTGAACACCCAAGTCCATGTCAAGGCTAGTCCATTAACAAGGTGCT
TTGTCTGTTCTACAGTATTGTGTTCTAATAGTTCTGAGCATTATGTTGCC
TGGTCTCAGATACTCAAGAGTTCCTTGAAATTGTAATTTCTGTACTTATG
CAGAAGAGGAAATCTTGTTTATCATATAGAATGTTCTTCCCTTTAACTAT
GAATGAGAATTAGGTAGCTACACTGTAATATGTAAAATGACTAAATGAGG
AATCTGTAATAAGCAGTACTTCCCCTTTTTCCTTTATAAAAATATCTTGT
CGAAACTTTCCTAAANGTGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGCTGTGGTCTTATAGTTTGTATTTTTTTGATGA
TTTAAGCAGCCCTGTAAGTCAAAGCTCCATCCTTTTCTTTGAAAGCCATC
CTTGAATTGTGATTTGCACAGGCGAGCAAGGTACATGAAGAAACTTTCCT
TCCAGGAGAAGTAATTGCAGAGCAAGGAGATTTTATGGATCAGCTCTATA
TAGTTTGTCATGGTAAGCTGGAACAACTATATCCAATTTGACATTTTCTT
ATGGTTATGGGCATATATCCCCCCTGAACCCATCTAATTGCTACAAAAAA
TTCCATGAGCGAAGCTTCTGAATTGTTAGGTGTATCTCAATTGCAGCTAG
GCTCAGCCTCGGGTATTGTCTAGAATATCTTTTTATTGAGCATACACAAT
TTGGAGTCAAAAATTCATGAAATATGGTAAAGTCAAAGAATTAAACTAAA
TCACTCATGTCTACTCAAATTAGGTAGATCCTTAAGGCTTATGTTAGTAC
TTGGTCAACAATTAGGAATTTGGGATTAATTGTGAACTGTGCATGATCTT
AGAGTCGAGCCATAGGTTTATCATTGATACATGGCAATATATCTCTCTAG
ACCATGTATACTGACCTATTATAAATCACTACAAATGATATGAGCACGTG
CAGTATTACTCGTGAATCAGAACTGTATCACACTGGATCATGATTCGGTT
GAGCTGAAGATTATTCATAGTCTTCTAGTGTAGAATTCATAGCCAAGCCA
ACACATGTTTTCGTACTAATAGTTATACTAATGACGCCCAGCAATTTTCT
AAGTCTTTAAATTTGAATTAATTGGTTTGTCCAGCCATATATATTTATAC
TATATTATTAAAACTAAACATACAAAAGTTTCGTTGTTGGTTTGTAGTCT
AGTATAGTGGATTATAACTGTTAGATCACCTGAATTAAATTGATTATAAC
CGTTAAATTGAATTTTTTGTATTTCACTGTCTATGCTACTAAAGGTCTAA
AGTTCAAATCCCATCAACAACATATTAAAATATTTATTATAATATATATC
TAACATAATAATAAATAGGGGTTGAATCCCGTGAACATATTAAAACTACA
CACACACACACACACACACACACATATATGTGTGTGTGTGTGTGTAATTT
AATTCTAACAATGCAAATAAAGTATATTATTATATTTTATTATCGACATT
AAATTTATTAAATTTAAATACACAAATAATATTTAAAAAAATATAACATA
GAATGTTTGGCTCTGGCATGACACGGGTTATAAATTAGCATGCATGGAAC
ATTCTACTCCACTATAAACCTCCTTAGAATAGAAACTAGAAACTAAAATA
AAAAATTTCTAAATTGCGTCGAATTAGAGAACATATGGTATGTAAATTGA
TCGTTGGGAGATGAAAACAATACAGTGAAGTCGAATTTAAAAAAAAAAAA
GCTCACCGATTGACGGGAAAAATCAAATTAAAAGCGGAGGGGATAATGTG
GGATCATGTATAGGAGGGTGTATATGAGTTGTGTGTGGTGCCTTCTAGGA
GCCATTAGATTAGATTGATGTAAGGACTTAAATCAGTTTCTAGTTTCTAT
TTTAGTTTTGGTTTCTATTTGATCAATTGCCTACATATACATATACATAT
ACATATACATATACATATACATATACATATACATATACATATACATATAC
ATACATACATACATATATATATTATATATCTATATTAATTACGTGTTTTA
TATGTAGTGTATTCCATATTCAGCTTGTTTGCAATATTTTGTAATTAGTG
GAAGGCTGGGAGATTGTGCAGGAAAATTAGGAGGCACTGAAGGTGAATTC
GAAGAACCTGTTCACTTTCTACAGAGTCACAGTTCACTAGGCGAAATGTC
TGTTCTTTGTAATATCCGATTACCGTACACAGTTCAAGTCCTTGAAAATT
CAAAGTTGCTAAGACTTGATAAGCAATCATTCCTAAACCTTCTTGATGTG
TACTTCTCAGATGGGCGGTTCATCATCAATAATCTACTTGAGGTGAATCA
ACAACTCTGTTTAATCTTGTCATGTTTTTGTGTTTGGAATGTGTAGTTCG
GTGGTGTTTGGGGGGGGAGGGGGTCTATATTGTTTGTTATATGAGCGTGC
CCAATAATTATATAAACCTTGGCTTGAAAACCAAATTGCTAGAGAATTCT
GGGTCAGTCAACTGCTAAATACTTGTATTGCATAAACTGGCCATGTTTTA
GAGTTTTTTGTAATACTATCATCACCTTACAATACAATTAACTTCTGTTA
TGTCGTTCTTTTTTATTTGCAGGGAAAAACAACCATCCTTCAGAACAAGA
TCTTAGAGTCTGATATAGTACTTCATATTGGGCAACATGAATCTGAGTTG
GCTATGAAATTAAACTGCGCTGCCTTTTATGGAGACCTCCCCCGCTTAAA
ACGTTTAGTTGCAGCTGGAGCGGATACCAGCAACACTGATTATGATGGGA
GATCACCTCTGGTATCAGTTATATTTTTATAGCAAAATTCATATAATTTT
ATTGTATTTATCTCATGTGATTATTTTCAATACTGATTCTAGTTTTTGTG
AAGTAATATATATCTACAATCTCCTATACACTCCTGTGCACAGAAGCAGA
CTAAGCCCAATCTCATTCACATTTATTATTTAACCGCAGTAATTTAAAGG
TGTTAAAGAATCATCTGACGTTAGGTGTTTCTCTTGAAATTTTGGTGAAT
GCATTAAATCTGGACTCTGCCTAGGAAATAACTGCTGAAAGATTCCATCG
ATAAGAAATTAAATCAGCCATGCTTTTTGACAATGTTCTAAATACTATAA
GACAGAATTTCTAAGATCCATCTTGTAAGTTGTTCCATATACGAACAGTT
AGCAGTAGTGTAATTGCAGTTTTGTACCTAGAGTGCCAAATGTGGAATGG
TTCCTTAGACCAAGATAATGTTCATCAAATATATGGATCTCGATTCTATG
GCTTCCTGATGATACTTGGTCACACCATGAAATGGATTAATATATGGAAC
CACGTCTTAATGGGTGTGGCTTTTTGGATCATATTTTTGTAGTTATTGTG
CACTGACAAATCATAGTTGTGCTCTGATACATTGTGATCCACGTAACTGG
ATGATGTATTATTGATCTTATTCCATAATGGGGCATGATGTACCAAACTA
CCACTCGTAATCCGCGCACCTAATAAGAAATGCACATTCTTTGGGCAACT
TTTCTATACTTCACTAGGGCTCCCATATTCTCTCATCTTAAACATTGTTT
CCTATTGGCCTAAATGACATAATTATTCAAATCAATATTCTTTCTATGAC
AAGTATAATGTTTGTAAGGAAACAATTGCATAGTGTTATTTAGGGAAGCA
AAAAAAAAAAAGTNAAGGAAACAATTGCATAGTGTTATTTAGGGAAGCAA
AAAAAAAAAAGTGGCTCCTCACACCAAAAAAAATTCTGCACATACATATT
TTTAGTTTGAATTATCGATAAAAGTTAGTTACTAAAATGTCAGCTTTGGG
AATCAATAAATGCCCAAGCAATGACAATGGTGCTCCTTGCTCTTGATTCT
TATCTCCTCCTTCCCCTATACTTAAAAAGATATCAGCTGTTAAAAGTACA
CAATGTTGGTCATTCAGTGTCTTGTTTAAAGTCAAATTTACTCCTCTTAT
ATCCTATTGCTTGTATATTTATGCTCTCTCTGTTGGTTTGTTGTGTATTC
TATCTTGTGTGTGCCTATCAACCGACACATTCTTAGAACTTATTCTGTTT
TGTCACATATGTATTTGCCTCTGGCATGATCACAGTCTATAGCCTTTTAT
TAATGATACTTTCTCTATTCCAGCATCTTGCTGCATCAAAGGGAAATGAA
GATATTGTTAAGTTTCTCCTTCAAAAAGAGGCAAGAGTCAGCATCACTGG
TAAGCCACCTCATTTTCCAATGTCTCACTCACTCTCACTCTCAGTTACAC
TATGAGCTTTAGACTTTGCATCCAAGACCTATTGGATGTCAAATTGTAAA
TTCACACTGTGTTATCTTTCGTAACAGATAACTATGGAAACACTCCATTA
CATGAAGCGATAAAGCACAGTCATGAAAGTGTTGCTTCTTTGCTAGTAAA
ATCAGGGGCTTCTCTTGATATAATCGATGCTGGGAACTGTCTCTGTATGG
CTGTTGTTAGAGAGGATTTCGATTACTTGAGGAAGGTCATGGAAATTGGA
GCAAACCCAAATTCTAAAAATTATGATCTGCGGACCCCACTTCATTTAGC
TTCATCCAAAGGATTATATGCAATCGCACATGTACTTTTGGACGCTGGAG
CAAGTGTATTTGCAAAGGACAGGTACAGCTTTTTATTATTGTCCTGTGGT
AAAATGATACATAGAGCATCTCCATTCTCATTCTTTTTTAATTTGGTCTT
ATACCAGTATTCCATTTGTCATATTTTGTGATCAAATATATTATTTTTTT
AATAGATGGGGAAACACTCCGCTTGATGAAGCAAGGATAGGTGGAAATAA
GACTCTAATACAGCTACTGGAAAATGCAAAGCATGATCAGCTTTTGAAGT
TCCCTAATTGTTTGAAGGGATTCCAAGGTACTAATATTCTATCTAAAAAA
TTTATCGGTTTCGTGTTTTGCTTTGAGGAAATTCTAACCTAAATTTAAGT
AGCAGGAAACGATGTACTCCACATATTAGGCTTTAAAAACTGTTTTAGGA
TACGTGTGTACATCCAAGGAAATATACAAGACCTGCAAATGAATTGTTTG
TTTTTTAGACCCAGTTTTCTTGGCTATCTAGAGGCTTTTGTCTAGTTACA
GGATATTAGGTACATGGTGGTATAATTAGTTACACTTACTGGTATCATAC
AGTGTATATAATATGAAAGGGCAGGGCTGCAGACGTTTTGAGTCGCTGAA
AAATGGCCAAAGCAGCAAAGTCCATAACTAAAGTTTTAAGGGAAGGGGAG
CAAGACAAACAGGGGAGAGTTGCAGCTTGGCATATATGGTTTGTAATATG
ACCTGCAATTTTTTCTCAGTTTTGACCTCTTCCTCTCTCATCGAGTTTGT
TTGTCCTTTCTTTTATGTTTTACCCAATATTCATCTGCATGAGTCAGATG
CAAGACCAAGCCCTCATAGATGTCCTTATAGCAGGATAAGGGCTCTCTGA
CGTGCAGTGTCCCTCGCCTTAAGGACTTCCCTTAAGCTGACCCTGACCTG
ACACTATGGGGCAAGTAGGCTTCAAAACACTATTGCCGTTTGTCGAATAG
ACATCCATATGATCCTTTGCTTTATATTAATTTTACTTGTTGTGGACCTT
AAGGATCTGTAAACTGAAATAACCTGTACATAGAAGTATGAAACCAAGAA
TCGGCAATTATCTAGTCACCTTATAGCAAATTCCTCATAGTTGGTGCCCA
GGCGTTCAAGCACTTGATAATCGCCACATCTCAAGAAACTATGGTAACCA
TTTTAGTGGAAATTCCTATCATGTGCATCCTTATATGAGCTTTCCCTCGT
TTCCAGCCAAAAGAGTTAGTATATGATCTTCTCTCTACCCACAGCAGCTA
CTTACATGTTTTCTTAAAACAGATGTGCAAAGGAAATGCACTGTTTTTCC
CTTCCACTCATGGGATCACCAAGAAAGAAGACTAGGGGTTGTGCTTTGGA
TTCCACAAAACATTGAGGAGCTCATCGAGGCGGCAAAAAAGCAGCTTAAG
CTTCCAGGTTCTTGTTATATAATAACAGAGGATGGGGGTAAGATTCTGGA
CTTGGGAATGATTTGTGATGGCCAAAAGCTATTTTTGGTGAGTGATAATT
CTGAAACTTAG

Sequence Length:

8461

Sequence Checksum:

91c4f5d3380fc466f1351b2913c7b053

View location in JBrowse:

DCARv2_Chr3:35344338..35352798-

Cds:

>DCAR_011386cds ATGTATTCCTTTCAGGCTAGTGGCAGGAAGGAACCAGTCAGGTATCTATT GTGGATTAGATTAAGCCGGGCTGTCAGAGTGACCGAATTATTTGAGAAAT TAGAAAAAGATATTCGTGTCAATTATCTTTTTACAAGGATCATCAAACTT TTTGTTGTTGAGCTCTATTGCACGCATACAGCTGCTTGCATATTTTACTA TCTGGCTACTACACTGCCACCGGCACAGGAAGGTTATACATGGATAGGAA GTTTAAAGATGGGTGACTACAATTACTCTCATTTCAGAGATATTGATCTT TGGACGCGCTACATTACATCATTATATTTTGCCATTGTTACGATGGCAAC TGTTGGTTACGGAGATGTACATGCAGTGAATAACAGGGAAATGATATTCA TCATGATTTTTGTCTCCTTGGACATGATTCTTGGTGCGTATTTACTTGGT AATATGGCTGCACTGATCGTAAAAGGATCAAAAACTGAGAAGTTTAGAGA TAAGATGTCAGACCTTTTGGAATACATGAACCGAAAGAAACTGGGTAAGC AGATATTTAATGAGATAAAAGGCCATGTACAATCACAATATGCGAACAGT TGCACAGAGGCTGCTGTCCTCCAGGATATTCCAATTTCCTTTCGAGCCAG GATCTCAGAAAGGTTATACGTGCCGTATATAAGGGAGGTTCCTATTTTCA AGGGTTGCTCATCTGGATTCGTTAAACAGATAGCGAGCAAGGTACATGAA GAAACTTTCCTTCCAGGAGAAGTAATTGCAGAGCAAGGAGATTTTATGGA TCAGCTCTATATAGTTTGTCATGGAAAATTAGGAGGCACTGAAGGTGAAT TCGAAGAACCTGTTCACTTTCTACAGAGTCACAGTTCACTAGGCGAAATG TCTGTTCTTTGTAATATCCGATTACCGTACACAGTTCAAGTCCTTGAAAA TTCAAAGTTGCTAAGACTTGATAAGCAATCATTCCTAAACCTTCTTGATG TGTACTTCTCAGATGGGCGGTTCATCATCAATAATCTACTTGAGGGAAAA ACAACCATCCTTCAGAACAAGATCTTAGAGTCTGATATAGTACTTCATAT TGGGCAACATGAATCTGAGTTGGCTATGAAATTAAACTGCGCTGCCTTTT ATGGAGACCTCCCCCGCTTAAAACGTTTAGTTGCAGCTGGAGCGGATACC AGCAACACTGATTATGATGGGAGATCACCTCTGCATCTTGCTGCATCAAA GGGAAATGAAGATATTGTTAAGTTTCTCCTTCAAAAAGAGGCAAGAGTCA GCATCACTGATAACTATGGAAACACTCCATTACATGAAGCGATAAAGCAC AGTCATGAAAGTGTTGCTTCTTTGCTAGTAAAATCAGGGGCTTCTCTTGA TATAATCGATGCTGGGAACTGTCTCTGTATGGCTGTTGTTAGAGAGGATT TCGATTACTTGAGGAAGGTCATGGAAATTGGAGCAAACCCAAATTCTAAA AATTATGATCTGCGGACCCCACTTCATTTAGCTTCATCCAAAGGATTATA TGCAATCGCACATGTACTTTTGGACGCTGGAGCAAGTGTATTTGCAAAGG ACAGATGGGGAAACACTCCGCTTGATGAAGCAAGGATAGGTGGAAATAAG ACTCTAATACAGCTACTGGAAAATGCAAAGCATGATCAGCTTTTGAAGTT CCCTAATTGTTTGAAGGGATTCCAAGATGTGCAAAGGAAATGCACTGTTT TTCCCTTCCACTCATGGGATCACCAAGAAAGAAGACTAGGGGTTGTGCTT TGGATTCCACAAAACATTGAGGAGCTCATCGAGGCGGCAAAAAAGCAGCT TAAGCTTCCAGGTTCTTGTTATATAATAACAGAGGATGGGGGTAAGATTC TGGACTTGGGAATGATTTGTGATGGCCAAAAGCTATTTTTGGTGAGTGAT AATTCTGAAACTTAG

Pep:

>DCAR_011386pep MYSFQASGRKEPVRYLLWIRLSRAVRVTELFEKLEKDIRVNYLFTRIIKL FVVELYCTHTAACIFYYLATTLPPAQEGYTWIGSLKMGDYNYSHFRDIDL WTRYITSLYFAIVTMATVGYGDVHAVNNREMIFIMIFVSLDMILGAYLLG NMAALIVKGSKTEKFRDKMSDLLEYMNRKKLGKQIFNEIKGHVQSQYANS CTEAAVLQDIPISFRARISERLYVPYIREVPIFKGCSSGFVKQIASKVHE ETFLPGEVIAEQGDFMDQLYIVCHGKLGGTEGEFEEPVHFLQSHSSLGEM SVLCNIRLPYTVQVLENSKLLRLDKQSFLNLLDVYFSDGRFIINNLLEGK TTILQNKILESDIVLHIGQHESELAMKLNCAAFYGDLPRLKRLVAAGADT SNTDYDGRSPLHLAASKGNEDIVKFLLQKEARVSITDNYGNTPLHEAIKH SHESVASLLVKSGASLDIIDAGNCLCMAVVREDFDYLRKVMEIGANPNSK NYDLRTPLHLASSKGLYAIAHVLLDAGASVFAKDRWGNTPLDEARIGGNK TLIQLLENAKHDQLLKFPNCLKGFQDVQRKCTVFPFHSWDHQERRLGVVL WIPQNIEELIEAAKKQLKLPGSCYIITEDGGKILDLGMICDGQKLFLVSD NSET*