MK001048 GSSR-049

Resource Type: 
Genetic Marker
Name: 
MK001048 GSSR-049
Identifier: 
MK001048_GSSR_049
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  2. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK001048 GSSR-049, is adjacent to primer, GSSR-49-F.
The genetic_marker, MK001048 GSSR-049, is adjacent to primer, GSSR-49-R.
The genetic_marker, MK001048 GSSR-049, is adjacent to gene, DCAR_028090.
The genetic_marker, MK001048 GSSR-049, is located in gene, LOC108199997.
The marker_locus, GSSR-049, is an instance of genetic_marker, MK001048 GSSR-049.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2015 HM3Chr821.295GSSR-049MapViewer
2014 J.Parsons Th. HM3Chr821.295GSSR-049MapViewer
Synonyms: 
  • MK001048
Sequence Coordinates: 
DCARv2_Chr8:15307150..15307393+
View location in JBrowse: 
DCARv2_Chr8:15307150..15307393+
Sequence: 
ACAGACCAAAACCGACGATTAAAAATACATCTTTAAAAAGGCAGTATGAA
CAACGTATAATCAGAATTTCAAAATGTTTATGCTGGATGCATTTCAGTAA
AACTACAATCAAGTACGAGATAGAGACGTAAATTTGACAAACACCAAATT
CTCCAACTTCACTCCATTATGTTTCATCCTAAGTCATCACATCGGGCTCA
GCAAAATAACACTTCCCAAAATCCATTTCATCGATTCTTAATACCAAACT
CACCACATTTATCAAGTCACTCTATACAATGAAACTAAACAGCTATCAGA
CTGTTATCACAGGGAAAAGCAATGCACAACAAAATTACAAGGAAAAATTC
CACCACAACAAACAAAATATCAAGAACTGTTATATTTTAGAAGGCAATAA
TCTTTTAACACAAACCCATGATCCATCTCATCTAATAGCCTCATAACAAT
ATTGTCGATTCAATCAAAACACAAAAATAATAATATGACAAACACACAGA
CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGTGAC
CTGAGAATG
Sequences: 
>MK001048_GSSR_049 ID=MK001048_GSSR_049; Name=MK001048 GSSR-049; organism=Daucus carota; type=genetic_marker
ACAGACCAAAACCGACGATTAAAAATACATCTTTAAAAAGGCAGTATGAA
CAACGTATAATCAGAATTTCAAAATGTTTATGCTGGATGCATTTCAGTAA
AACTACAATCAAGTACGAGATAGAGACGTAAATTTGACAAACACCAAATT
CTCCAACTTCACTCCATTATGTTTCATCCTAAGTCATCACATCGGGCTCA
GCAAAATAACACTTCCCAAAATCCATTTCATCGATTCTTAATACCAAACT
CACCACATTTATCAAGTCACTCTATACAATGAAACTAAACAGCTATCAGA
CTGTTATCACAGGGAAAAGCAATGCACAACAAAATTACAAGGAAAAATTC
CACCACAACAAACAAAATATCAAGAACTGTTATATTTTAGAAGGCAATAA
TCTTTTAACACAAACCCATGATCCATCTCATCTAATAGCCTCATAACAAT
ATTGTCGATTCAATCAAAACACAAAAATAATAATATGACAAACACACAGA
CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGTGAC
CTGAGAATG
This is the primary representative sequence for this feature.
Sequence Length: 
559