MK001129 GSSR-130

Resource Type: 
Genetic Marker
Name: 
MK001129 GSSR-130
Identifier: 
MK001129_GSSR_130
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Ali A, Matthews WC, Cavagnaro PF, Iorizzo M, Roberts PA, Simon PW. Inheritance and mapping of Mj-2, a new source of root-knot nematode (Meloidogyne javanica) resistance in carrot.. The Journal of heredity. 2014; 105(2):288-91.
  2. Yildiz M, Willis DK, Cavagnaro PF, Iorizzo M, Abak K, Simon PW. Expression and mapping of anthocyanin biosynthesis genes in carrot. Theoretical and Applied Genetics. 2013; 126(7):1689-1702.
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK001129 GSSR-130, is adjacent to primer, GSSR-130-F.
The genetic_marker, MK001129 GSSR-130, is adjacent to primer, GSSR-130-R.
The genetic_marker, MK001129 GSSR-130, is located in gene, DCAR_028247.
The genetic_marker, MK001129 GSSR-130, is located in gene, LOC108199647.
The marker_locus, GSSR-130, is an instance of genetic_marker, MK001129 GSSR-130.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 Mj-2LG0833.3GSSR-130MapViewer
2013 10117 BLG0738.6GSSR-130MapViewer
Synonyms: 
  • MK001129
Sequence Coordinates: 
DCARv2_Chr8:10246273..10246796-
View location in JBrowse: 
DCARv2_Chr8:10246273..10246796-
Sequence: 
AGTTCATGCATCTAGCATTGGAGTTCAAGTTTTATTTTGGCACCAAAAAA
TTACTTTTTGATGCCATATTATAGCAATGGCTATAGCTATTTTGCGTCTA
GTATTGGAGTTGCTCTAAGATCCTACTTGTATATAGTAGGGCAATTGAAT
AAACATTTATAAGCCTAAAGCTGCTGTAAATGTGTATAAAAAAGTTCAGA
CATTTAGGTCGTCCAGGGTTAGTTACTGAACAATCTGATATGCAATCAGC
CAACAAAATTTTAGGCTTTGGGCATCACAATTATGGTGAAAGATATAATC
TTAAGATTAAATATCCAAGAATCAGAAAAGGAATTATACGTATCTATGTA
TGTATGTATGCATGTATGTATTAGGTTGGAACTCAGAAACTTACGTCCAC
ATAACTATAAATATGCTAGTATAAACAATAATTACCAATTTACCATGGCA
TCATGGAATCAGATAGAAAGTAAAACATTCTAATAATTTTATTCTATTAA
TATAAACCATAATCGAAAATTGTAATTCGCACACTACTAAAATTACAAAG
ATATTAATGCTTGTGGAGCATTGTGACTACTCTACTTTGTTCTGTTCAAC
AGAAAACTGCCAAATTATACACTTGAAGTATACTCTGCTTATATTGCCCT
TAATTTATTCTGATGAAAAACAGAGTCTGAAACCCATTTACAAAGAAATA
TATAACTGAATACAAGCAACACTCAGAAGATGTCATATAAGTGGAGAGAC
ACTAGT
Sequences: 
>MK001129_GSSR_130 ID=MK001129_GSSR_130; Name=MK001129 GSSR-130; organism=Daucus carota; type=genetic_marker
AGTTCATGCATCTAGCATTGGAGTTCAAGTTTTATTTTGGCACCAAAAAA
TTACTTTTTGATGCCATATTATAGCAATGGCTATAGCTATTTTGCGTCTA
GTATTGGAGTTGCTCTAAGATCCTACTTGTATATAGTAGGGCAATTGAAT
AAACATTTATAAGCCTAAAGCTGCTGTAAATGTGTATAAAAAAGTTCAGA
CATTTAGGTCGTCCAGGGTTAGTTACTGAACAATCTGATATGCAATCAGC
CAACAAAATTTTAGGCTTTGGGCATCACAATTATGGTGAAAGATATAATC
TTAAGATTAAATATCCAAGAATCAGAAAAGGAATTATACGTATCTATGTA
TGTATGTATGCATGTATGTATTAGGTTGGAACTCAGAAACTTACGTCCAC
ATAACTATAAATATGCTAGTATAAACAATAATTACCAATTTACCATGGCA
TCATGGAATCAGATAGAAAGTAAAACATTCTAATAATTTTATTCTATTAA
TATAAACCATAATCGAAAATTGTAATTCGCACACTACTAAAATTACAAAG
ATATTAATGCTTGTGGAGCATTGTGACTACTCTACTTTGTTCTGTTCAAC
AGAAAACTGCCAAATTATACACTTGAAGTATACTCTGCTTATATTGCCCT
TAATTTATTCTGATGAAAAACAGAGTCTGAAACCCATTTACAAAGAAATA
TATAACTGAATACAAGCAACACTCAGAAGATGTCATATAAGTGGAGAGAC
ACTAGT
This is the primary representative sequence for this feature.
Sequence Length: 
756